RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 MCTP2Q6DN12 878 aa22.23■■□□□ 1.15
COMMD1-208ENST00000472729 TRIM22Q8IYM9 498 aa22.23■■□□□ 1.15
COMMD1-208ENST00000472729 HERVK_113Q902F9 699 aa22.23■■□□□ 1.15
COMMD1-208ENST00000472729 TM6SF1Q9BZW5 370 aa22.23■■□□□ 1.15
COMMD1-208ENST00000472729 PDRG1Q9NUG6 133 aa22.23■■□□□ 1.15
COMMD1-208ENST00000472729 MTMR10Q9NXD2 777 aa22.23■■□□□ 1.15
COMMD1-208ENST00000472729 C17orf102A2RUQ5 167 aa22.22■■□□□ 1.15
COMMD1-208ENST00000472729 PRPF3O43395 683 aaKnown RBP22.22■■□□□ 1.15
COMMD1-208ENST00000472729 LGALS2P05162 132 aa22.22■■□□□ 1.15
COMMD1-208ENST00000472729 IQCF3P0C7M6 154 aa22.22■■□□□ 1.15
COMMD1-208ENST00000472729 CCT2P78371 535 aaKnown RBP22.22■■□□□ 1.15
COMMD1-208ENST00000472729 AFAP1L1Q8TED9 768 aa22.22■■□□□ 1.15
COMMD1-208ENST00000472729 SLC26A6Q9BXS9 759 aa22.22■■□□□ 1.15
COMMD1-208ENST00000472729 JADE2Q9NQC1 790 aa22.22■■□□□ 1.15
COMMD1-208ENST00000472729 PKD2L1Q9P0L9 805 aa22.22■■□□□ 1.15
COMMD1-208ENST00000472729 MSRAQ9UJ68 235 aa22.22■■□□□ 1.15
COMMD1-208ENST00000472729 SLC4A7Q9Y6M7 1214 aa22.22■■□□□ 1.15
COMMD1-208ENST00000472729 BAZ2BQ9UIF8 2168 aaKnown RBP22.22■■□□□ 1.15
COMMD1-208ENST00000472729 PARNO95453 639 aaKnown RBP22.21■■□□□ 1.15
COMMD1-208ENST00000472729 ITGB5P18084 799 aa22.21■■□□□ 1.15
COMMD1-208ENST00000472729 PDIA3P30101 505 aaKnown RBP22.21■■□□□ 1.15
COMMD1-208ENST00000472729 PTK7Q13308 1070 aa22.21■■□□□ 1.15
COMMD1-208ENST00000472729 CCDC148Q8NFR7 591 aa22.21■■□□□ 1.15
COMMD1-208ENST00000472729 BICD2Q8TD16 824 aa22.21■■□□□ 1.15
COMMD1-208ENST00000472729 GPR20Q99678 358 aa22.21■■□□□ 1.15
COMMD1-208ENST00000472729 SDF4Q9BRK5 362 aa22.21■■□□□ 1.15
COMMD1-208ENST00000472729 C16orf70Q9BSU1 422 aa22.21■■□□□ 1.15
COMMD1-208ENST00000472729 ANO3Q9BYT9 981 aa22.21■■□□□ 1.15
COMMD1-208ENST00000472729 AGXT2Q9BYV1 514 aa22.21■■□□□ 1.15
COMMD1-208ENST00000472729 UPF3BQ9BZI7 483 aaKnown RBP22.21■■□□□ 1.15
COMMD1-208ENST00000472729 UBIAD1Q9Y5Z9 338 aa22.21■■□□□ 1.15
COMMD1-208ENST00000472729 LTBP2Q14767 1821 aa22.2■■□□□ 1.14
COMMD1-208ENST00000472729 MYH6P13533 1939 aa22.2■■□□□ 1.14
COMMD1-208ENST00000472729 HAS3O00219 553 aa22.2■■□□□ 1.14
COMMD1-208ENST00000472729 SELPP16109 830 aa22.2■■□□□ 1.14
COMMD1-208ENST00000472729 SEMA3FQ13275 785 aa22.2■■□□□ 1.14
COMMD1-208ENST00000472729 SEPT1Q8WYJ6 367 aa22.2■■□□□ 1.14
COMMD1-208ENST00000472729 GLG1Q92896 1179 aa22.2■■□□□ 1.14
COMMD1-208ENST00000472729 PHKBQ93100 1093 aa22.2■■□□□ 1.14
COMMD1-208ENST00000472729 MXRA8Q9BRK3 442 aa22.2■■□□□ 1.14
COMMD1-208ENST00000472729 RNF26Q9BY78 433 aaPredicted RBP22.2■■□□□ 1.14
COMMD1-208ENST00000472729 STXBP5LQ9Y2K9 1186 aa22.2■■□□□ 1.14
COMMD1-208ENST00000472729 TMEM265A0A087WTH1 108 aa22.19■■□□□ 1.14
COMMD1-208ENST00000472729 DNAJB2P25686 324 aa22.19■■□□□ 1.14
COMMD1-208ENST00000472729 SSRP1Q08945 709 aaKnown RBP22.19■■□□□ 1.14
COMMD1-208ENST00000472729 RAB30Q15771 203 aa22.19■■□□□ 1.14
COMMD1-208ENST00000472729 JAKMIP3Q5VZ66 844 aa22.19■■□□□ 1.14
COMMD1-208ENST00000472729 TYW1BQ6NUM6 668 aa22.19■■□□□ 1.14
COMMD1-208ENST00000472729 LRRC8DQ7L1W4 858 aa22.19■■□□□ 1.14
COMMD1-208ENST00000472729 REXO1Q8N1G1 1221 aaKnown RBP22.19■■□□□ 1.14
COMMD1-208ENST00000472729 TNPO1Q92973 898 aaKnown RBP22.19■■□□□ 1.14
COMMD1-208ENST00000472729 ATP6V0A1Q93050 837 aa22.19■■□□□ 1.14
COMMD1-208ENST00000472729 TIFAQ96CG3 184 aa22.19■■□□□ 1.14
COMMD1-208ENST00000472729 PGBD1Q96JS3 809 aa22.19■■□□□ 1.14
COMMD1-208ENST00000472729 SEMA6BQ9H3T3 888 aa22.19■■□□□ 1.14
COMMD1-208ENST00000472729 BCAS3Q9H6U6 928 aa22.19■■□□□ 1.14
COMMD1-208ENST00000472729 IFNAR1P17181 557 aa22.18■■□□□ 1.14
COMMD1-208ENST00000472729 TCF7P36402 384 aaPredicted RBP22.18■■□□□ 1.14
COMMD1-208ENST00000472729 CEP55Q53EZ4 464 aa22.18■■□□□ 1.14
COMMD1-208ENST00000472729 ZNF274Q96GC6 653 aaPredicted RBP22.18■■□□□ 1.14
COMMD1-208ENST00000472729 AZI2Q9H6S1 392 aa22.18■■□□□ 1.14
COMMD1-208ENST00000472729 JPH1Q9HDC5 661 aaPredicted RBP22.18■■□□□ 1.14
COMMD1-208ENST00000472729 KCNH7Q9NS40 1196 aa22.18■■□□□ 1.14
COMMD1-208ENST00000472729 TMEM260Q9NX78 707 aa22.18■■□□□ 1.14
COMMD1-208ENST00000472729 SZT2Q5T011 3432 aa22.17■■□□□ 1.14
COMMD1-208ENST00000472729 ESYT2A0FGR8 921 aa22.17■■□□□ 1.14
COMMD1-208ENST00000472729 ATP9AO75110 1047 aa22.17■■□□□ 1.14
COMMD1-208ENST00000472729 SMIM10L2AP0DMW4 78 aa22.17■■□□□ 1.14
COMMD1-208ENST00000472729 SMIM10L2BP0DMW5 78 aa22.17■■□□□ 1.14
COMMD1-208ENST00000472729 CKBP12277 381 aa22.17■■□□□ 1.14
COMMD1-208ENST00000472729 KCNA2P16389 499 aa22.17■■□□□ 1.14
COMMD1-208ENST00000472729 EVCP57679 992 aa22.17■■□□□ 1.14
COMMD1-208ENST00000472729 STK3Q13188 491 aa22.17■■□□□ 1.14
COMMD1-208ENST00000472729 ZMYND12Q9H0C1 365 aa22.17■■□□□ 1.14
COMMD1-208ENST00000472729 NCOA5Q9HCD5 579 aaKnown RBP22.17■■□□□ 1.14
COMMD1-208ENST00000472729 CXXC1Q9P0U4 656 aaPredicted RBP22.17■■□□□ 1.14
COMMD1-208ENST00000472729 TCEAL9Q9UHQ7 104 aa22.17■■□□□ 1.14
COMMD1-208ENST00000472729 NID2Q14112 1375 aa22.16■■□□□ 1.14
COMMD1-208ENST00000472729 PPFIA3O75145 1194 aa22.16■■□□□ 1.14
COMMD1-208ENST00000472729 CDKL5O76039 1030 aa22.16■■□□□ 1.14
COMMD1-208ENST00000472729 ATP2A2P16615 1042 aaKnown RBP22.16■■□□□ 1.14
COMMD1-208ENST00000472729 SREBF1P36956 1147 aa22.16■■□□□ 1.14
COMMD1-208ENST00000472729 THPOP40225 353 aa22.16■■□□□ 1.14
COMMD1-208ENST00000472729 KCNJ6P48051 423 aa22.16■■□□□ 1.14
COMMD1-208ENST00000472729 NLRP5P59047 1200 aa22.16■■□□□ 1.14
COMMD1-208ENST00000472729 ARHGAP4P98171 946 aa22.16■■□□□ 1.14
COMMD1-208ENST00000472729 TOB2Q14106 344 aaPredicted RBP22.16■■□□□ 1.14
COMMD1-208ENST00000472729 ANKRD1Q15327 319 aa22.16■■□□□ 1.14
COMMD1-208ENST00000472729 RASIP1Q5U651 963 aa22.16■■□□□ 1.14
COMMD1-208ENST00000472729 SMARCAD1Q9H4L7 1026 aa22.16■■□□□ 1.14
COMMD1-208ENST00000472729 ERAP1Q9NZ08 941 aa22.16■■□□□ 1.14
COMMD1-208ENST00000472729 SLC9A2Q9UBY0 812 aa22.16■■□□□ 1.14
COMMD1-208ENST00000472729 GRXCR1A8MXD5 290 aa22.15■■□□□ 1.14
COMMD1-208ENST00000472729 KIF28PB7ZC32 967 aa22.15■■□□□ 1.14
COMMD1-208ENST00000472729 ANAPC15P60006 121 aa22.15■■□□□ 1.14
COMMD1-208ENST00000472729 ZNF200P98182 395 aaPredicted RBP22.15■■□□□ 1.14
COMMD1-208ENST00000472729 TRIM50Q86XT4 487 aa22.15■■□□□ 1.14
COMMD1-208ENST00000472729 LARP6Q9BRS8 491 aaKnown RBP22.15■■□□□ 1.14
COMMD1-208ENST00000472729 PBX4Q9BYU1 374 aa22.15■■□□□ 1.14
COMMD1-208ENST00000472729 ZNF576Q9H609 170 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms