RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 RAB11FIP4Q86YS3 637 aa11.72□□□□□ -0.53
SCAMP3-205ENST00000472397 GJD3Q8N144 294 aa11.72□□□□□ -0.53
SCAMP3-205ENST00000472397 EXOC6Q8TAG9 804 aa11.72□□□□□ -0.53
SCAMP3-205ENST00000472397 MYL10Q9BUA6 226 aa11.72□□□□□ -0.53
SCAMP3-205ENST00000472397 KRT23Q9C075 422 aa11.72□□□□□ -0.53
SCAMP3-205ENST00000472397 IGFLR1Q9H665 355 aa11.72□□□□□ -0.53
SCAMP3-205ENST00000472397 INSL6Q9Y581 213 aa11.72□□□□□ -0.53
SCAMP3-205ENST00000472397 BRWD1Q9NSI6 2320 aa11.71□□□□□ -0.53
SCAMP3-205ENST00000472397 BAZ2BQ9UIF8 2168 aaKnown RBP11.71□□□□□ -0.53
SCAMP3-205ENST00000472397 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.71□□□□□ -0.53
SCAMP3-205ENST00000472397 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.71□□□□□ -0.53
SCAMP3-205ENST00000472397 H3BRB1 525 aa11.71□□□□□ -0.53
SCAMP3-205ENST00000472397 GCOM1H8Y6P7 765 aaPredicted RBP11.71□□□□□ -0.53
SCAMP3-205ENST00000472397 ZBTB5O15062 677 aa11.71□□□□□ -0.53
SCAMP3-205ENST00000472397 CYTH3O43739 400 aa11.71□□□□□ -0.53
SCAMP3-205ENST00000472397 POLR2MP0CAP2 368 aa11.71□□□□□ -0.53
SCAMP3-205ENST00000472397 MARK3P27448 753 aa11.71□□□□□ -0.53
SCAMP3-205ENST00000472397 GTF2F1P35269 517 aaKnown RBP eCLIP11.71□□□□□ -0.53
SCAMP3-205ENST00000472397 MRPS9P82933 396 aaKnown RBP11.71□□□□□ -0.53
SCAMP3-205ENST00000472397 ARHGAP4P98171 946 aa11.71□□□□□ -0.53
SCAMP3-205ENST00000472397 PTH1RQ03431 593 aa11.71□□□□□ -0.53
SCAMP3-205ENST00000472397 RBL2Q08999 1139 aa11.71□□□□□ -0.53
SCAMP3-205ENST00000472397 SEMA3FQ13275 785 aa11.71□□□□□ -0.53
SCAMP3-205ENST00000472397 LEXMQ3ZCV2 418 aa11.71□□□□□ -0.53
SCAMP3-205ENST00000472397 CCDC178Q5BJE1 867 aa11.71□□□□□ -0.53
SCAMP3-205ENST00000472397 RUFY4Q6ZNE9 571 aa11.71□□□□□ -0.53
SCAMP3-205ENST00000472397 SERINC5Q86VE9 423 aa11.71□□□□□ -0.53
SCAMP3-205ENST00000472397 FAM178BQ8IXR5 827 aa11.71□□□□□ -0.53
SCAMP3-205ENST00000472397 SEPT8Q92599 483 aa11.71□□□□□ -0.53
SCAMP3-205ENST00000472397 EMID1Q96A84 441 aaPredicted RBP11.71□□□□□ -0.53
SCAMP3-205ENST00000472397 TUT1Q9H6E5 874 aaKnown RBP11.71□□□□□ -0.53
SCAMP3-205ENST00000472397 DOCK5Q9H7D0 1870 aa11.7□□□□□ -0.54
SCAMP3-205ENST00000472397 hCG_1642624A0A1W2PR95 340 aa11.7□□□□□ -0.54
SCAMP3-205ENST00000472397 PALM3A6NDB9 673 aaPredicted RBP11.7□□□□□ -0.54
SCAMP3-205ENST00000472397 PI4K2BG5E9Z4 385 aa11.7□□□□□ -0.54
SCAMP3-205ENST00000472397 NOP56O00567 594 aaKnown RBP11.7□□□□□ -0.54
SCAMP3-205ENST00000472397 IFIT3O14879 490 aaKnown RBP11.7□□□□□ -0.54
SCAMP3-205ENST00000472397 PPFIA4O75335 1185 aa11.7□□□□□ -0.54
SCAMP3-205ENST00000472397 GHRP10912 638 aa11.7□□□□□ -0.54
SCAMP3-205ENST00000472397 CTNNB1P35222 781 aa11.7□□□□□ -0.54
SCAMP3-205ENST00000472397 IGBP1P78318 339 aa11.7□□□□□ -0.54
SCAMP3-205ENST00000472397 GRM4Q14833 912 aa11.7□□□□□ -0.54
SCAMP3-205ENST00000472397 PLEKHG4Q58EX7 1191 aa11.7□□□□□ -0.54
SCAMP3-205ENST00000472397 USP17L6PQ6QN14 398 aa11.7□□□□□ -0.54
SCAMP3-205ENST00000472397 STOX1Q6ZVD7 989 aa11.7□□□□□ -0.54
SCAMP3-205ENST00000472397 TMEM192Q8IY95 271 aa11.7□□□□□ -0.54
SCAMP3-205ENST00000472397 CMTR1Q8N1G2 835 aaKnown RBP11.7□□□□□ -0.54
SCAMP3-205ENST00000472397 BANK1Q8NDB2 785 aa11.7□□□□□ -0.54
SCAMP3-205ENST00000472397 DSCC1Q9BVC3 393 aa11.7□□□□□ -0.54
SCAMP3-205ENST00000472397 IFIH1Q9BYX4 1025 aaKnown RBP11.7□□□□□ -0.54
SCAMP3-205ENST00000472397 RWDD1Q9H446 243 aaPredicted RBP11.7□□□□□ -0.54
SCAMP3-205ENST00000472397 CLDND1Q9NY35 253 aa11.7□□□□□ -0.54
SCAMP3-205ENST00000472397 GRXCR2A6NFK2 248 aa11.69□□□□□ -0.54
SCAMP3-205ENST00000472397 GRM6O15303 877 aa11.69□□□□□ -0.54
SCAMP3-205ENST00000472397 LINC01565O15544 149 aa11.69□□□□□ -0.54
SCAMP3-205ENST00000472397 RXRAP19793 462 aa11.69□□□□□ -0.54
SCAMP3-205ENST00000472397 PDE4AP27815 886 aa11.69□□□□□ -0.54
SCAMP3-205ENST00000472397 HTRA4P83105 476 aaPredicted RBP11.69□□□□□ -0.54
SCAMP3-205ENST00000472397 NUCB1Q02818 461 aa11.69□□□□□ -0.54
SCAMP3-205ENST00000472397 SMC5Q8IY18 1101 aa11.69□□□□□ -0.54
SCAMP3-205ENST00000472397 MRPL38Q96DV4 380 aaKnown RBP11.69□□□□□ -0.54
SCAMP3-205ENST00000472397 MTMR8Q96EF0 704 aa11.69□□□□□ -0.54
SCAMP3-205ENST00000472397 GPR20Q99678 358 aa11.69□□□□□ -0.54
SCAMP3-205ENST00000472397 LMCD1Q9NZU5 365 aa11.69□□□□□ -0.54
SCAMP3-205ENST00000472397 CTNNA3Q9UI47 895 aa11.69□□□□□ -0.54
SCAMP3-205ENST00000472397 SIP14410 1827 aa11.68□□□□□ -0.54
SCAMP3-205ENST00000472397 LAMA4Q16363 1823 aa11.68□□□□□ -0.54
SCAMP3-205ENST00000472397 GPR37L1O60883 481 aa11.68□□□□□ -0.54
SCAMP3-205ENST00000472397 EFCAB14O75071 495 aa11.68□□□□□ -0.54
SCAMP3-205ENST00000472397 PARNO95453 639 aaKnown RBP11.68□□□□□ -0.54
SCAMP3-205ENST00000472397 CYP21A2P08686 494 aa11.68□□□□□ -0.54
SCAMP3-205ENST00000472397 HOXD8P13378 290 aaPredicted RBP11.68□□□□□ -0.54
SCAMP3-205ENST00000472397 DLX2Q07687 328 aaPredicted RBP11.68□□□□□ -0.54
SCAMP3-205ENST00000472397 TMEM62Q0P6H9 643 aa11.68□□□□□ -0.54
SCAMP3-205ENST00000472397 MKRN4PQ13434 485 aaPredicted RBP11.68□□□□□ -0.54
SCAMP3-205ENST00000472397 COL9A3Q14050 684 aaPredicted RBP11.68□□□□□ -0.54
SCAMP3-205ENST00000472397 RPAINQ86UA6 219 aa11.68□□□□□ -0.54
SCAMP3-205ENST00000472397 SP7Q8TDD2 431 aaPredicted RBP11.68□□□□□ -0.54
SCAMP3-205ENST00000472397 LMBR1Q8WVP7 490 aa11.68□□□□□ -0.54
SCAMP3-205ENST00000472397 TOP1MTQ969P6 601 aa11.68□□□□□ -0.54
SCAMP3-205ENST00000472397 MYO7AQ13402 2215 aa11.68□□□□□ -0.54
SCAMP3-205ENST00000472397 MICAL3Q7RTP6 2002 aa11.67□□□□□ -0.54
SCAMP3-205ENST00000472397 EMSYQ7Z589 1322 aa11.67□□□□□ -0.54
SCAMP3-205ENST00000472397 SPATA31C2B4DYI2 1134 aa11.67□□□□□ -0.54
SCAMP3-205ENST00000472397 H3BNC9 293 aa11.67□□□□□ -0.54
SCAMP3-205ENST00000472397 ATP9AO75110 1047 aa11.67□□□□□ -0.54
SCAMP3-205ENST00000472397 CHRNA1P02708 482 aa11.67□□□□□ -0.54
SCAMP3-205ENST00000472397 GSPT1P15170 499 aaKnown RBP11.67□□□□□ -0.54
SCAMP3-205ENST00000472397 GATMP50440 423 aa11.67□□□□□ -0.54
SCAMP3-205ENST00000472397 WTAPQ15007 396 aa11.67□□□□□ -0.54
SCAMP3-205ENST00000472397 UBE2SQ16763 222 aa11.67□□□□□ -0.54
SCAMP3-205ENST00000472397 PTPROQ16827 1216 aa11.67□□□□□ -0.54
SCAMP3-205ENST00000472397 CSPP1Q1MSJ5 1256 aa11.67□□□□□ -0.54
SCAMP3-205ENST00000472397 PAN2Q504Q3 1202 aaKnown RBP11.67□□□□□ -0.54
SCAMP3-205ENST00000472397 KCNV1Q6PIU1 500 aa11.67□□□□□ -0.54
SCAMP3-205ENST00000472397 CCDC82Q8N4S0 544 aa11.67□□□□□ -0.54
SCAMP3-205ENST00000472397 SMARCC2Q8TAQ2 1214 aa11.67□□□□□ -0.54
SCAMP3-205ENST00000472397 DNAJB3Q8WWF6 145 aa11.67□□□□□ -0.54
SCAMP3-205ENST00000472397 FAM49AQ9H0Q0 323 aaPredicted RBP11.67□□□□□ -0.54
SCAMP3-205ENST00000472397 RIOX1Q9H6W3 641 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms