RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 CYP2C9P11712 490 aa10.45□□□□□ -0.74
SYN3-211ENST00000472027 CYP2C18P33260 490 aa10.45□□□□□ -0.74
SYN3-211ENST00000472027 ZNF76P36508 570 aa10.45□□□□□ -0.74
SYN3-211ENST00000472027 EPHB4P54760 987 aa10.45□□□□□ -0.74
SYN3-211ENST00000472027 ARHGAP4P98171 946 aa10.45□□□□□ -0.74
SYN3-211ENST00000472027 FPGSQ05932 587 aa10.45□□□□□ -0.74
SYN3-211ENST00000472027 MFSD10Q14728 455 aa10.45□□□□□ -0.74
SYN3-211ENST00000472027 SHHQ15465 462 aa10.45□□□□□ -0.74
SYN3-211ENST00000472027 KIAA0753Q2KHM9 967 aa10.45□□□□□ -0.74
SYN3-211ENST00000472027 CEP55Q53EZ4 464 aa10.45□□□□□ -0.74
SYN3-211ENST00000472027 SESTD1Q86VW0 696 aa10.45□□□□□ -0.74
SYN3-211ENST00000472027 REXO1Q8N1G1 1221 aaKnown RBP10.45□□□□□ -0.74
SYN3-211ENST00000472027 TMEM199Q8N511 208 aa10.45□□□□□ -0.74
SYN3-211ENST00000472027 C7orf31Q8N865 590 aa10.45□□□□□ -0.74
SYN3-211ENST00000472027 NECAB1Q8N987 351 aa10.45□□□□□ -0.74
SYN3-211ENST00000472027 BICD2Q8TD16 824 aa10.45□□□□□ -0.74
SYN3-211ENST00000472027 AIFM3Q96NN9 605 aa10.45□□□□□ -0.74
SYN3-211ENST00000472027 C22orf23Q9BZE7 217 aa10.45□□□□□ -0.74
SYN3-211ENST00000472027 HIPK3Q9H422 1215 aa10.45□□□□□ -0.74
SYN3-211ENST00000472027 KCNH7Q9NS40 1196 aa10.45□□□□□ -0.74
SYN3-211ENST00000472027 PKD2L1Q9P0L9 805 aa10.45□□□□□ -0.74
SYN3-211ENST00000472027 HDAC6Q9UBN7 1215 aa10.45□□□□□ -0.74
SYN3-211ENST00000472027 UMODL1Q5DID0 1318 aa10.44□□□□□ -0.74
SYN3-211ENST00000472027 H3BRB1 525 aa10.44□□□□□ -0.74
SYN3-211ENST00000472027 MEIS1O00470 390 aa10.44□□□□□ -0.74
SYN3-211ENST00000472027 LARGE1O95461 756 aa10.44□□□□□ -0.74
SYN3-211ENST00000472027 CTDNEP1O95476 244 aa10.44□□□□□ -0.74
SYN3-211ENST00000472027 LGALS2P05162 132 aa10.44□□□□□ -0.74
SYN3-211ENST00000472027 CYP3A4P08684 503 aa10.44□□□□□ -0.74
SYN3-211ENST00000472027 CSF2RAP15509 400 aa10.44□□□□□ -0.74
SYN3-211ENST00000472027 CCL23P55773 120 aa10.44□□□□□ -0.74
SYN3-211ENST00000472027 SP4Q02446 784 aa10.44□□□□□ -0.74
SYN3-211ENST00000472027 PTGISQ16647 500 aa10.44□□□□□ -0.74
SYN3-211ENST00000472027 LRIT3Q3SXY7 679 aa10.44□□□□□ -0.74
SYN3-211ENST00000472027 C9orf50Q5SZB4 431 aa10.44□□□□□ -0.74
SYN3-211ENST00000472027 UTP14CQ5TAP6 766 aaKnown RBP10.44□□□□□ -0.74
SYN3-211ENST00000472027 GDF6Q6KF10 455 aaPredicted RBP10.44□□□□□ -0.74
SYN3-211ENST00000472027 RASGRP4Q8TDF6 673 aa10.44□□□□□ -0.74
SYN3-211ENST00000472027 CRYGNQ8WXF5 182 aa10.44□□□□□ -0.74
SYN3-211ENST00000472027 SEPT1Q8WYJ6 367 aa10.44□□□□□ -0.74
SYN3-211ENST00000472027 KIF2CQ99661 725 aa10.44□□□□□ -0.74
SYN3-211ENST00000472027 NOC4LQ9BVI4 516 aaKnown RBP10.44□□□□□ -0.74
SYN3-211ENST00000472027 TUT1Q9H6E5 874 aaKnown RBP10.44□□□□□ -0.74
SYN3-211ENST00000472027 AGO4Q9HCK5 861 aaKnown RBP10.44□□□□□ -0.74
SYN3-211ENST00000472027 GTF2IRD1Q9UHL9 959 aa10.44□□□□□ -0.74
SYN3-211ENST00000472027 PCDHA4Q9UN74 947 aa10.44□□□□□ -0.74
SYN3-211ENST00000472027 NOD1Q9Y239 953 aa10.44□□□□□ -0.74
SYN3-211ENST00000472027 STK36Q9NRP7 1315 aa10.43□□□□□ -0.74
SYN3-211ENST00000472027 GSTTP1A0A1W2PQM5 241 aa10.43□□□□□ -0.74
SYN3-211ENST00000472027 FAM86B1E9PN63 330 aa10.43□□□□□ -0.74
SYN3-211ENST00000472027 SOX1O00570 391 aaPredicted RBP10.43□□□□□ -0.74
SYN3-211ENST00000472027 FAM86B2P0C5J1 330 aa10.43□□□□□ -0.74
SYN3-211ENST00000472027 TCF7P36402 384 aaPredicted RBP10.43□□□□□ -0.74
SYN3-211ENST00000472027 RBM25P49756 843 aaKnown RBP10.43□□□□□ -0.74
SYN3-211ENST00000472027 MAPK8IP2Q13387 824 aaPredicted RBP10.43□□□□□ -0.74
SYN3-211ENST00000472027 PPIGQ13427 754 aaKnown RBP eCLIP10.43□□□□□ -0.742e-13■■■■■ 30.4
SYN3-211ENST00000472027 C16orf59Q7L2K0 433 aa10.43□□□□□ -0.74
SYN3-211ENST00000472027 NIPA1Q7RTP0 329 aa10.43□□□□□ -0.74
SYN3-211ENST00000472027 PLA2G4DQ86XP0 818 aa10.43□□□□□ -0.74
SYN3-211ENST00000472027 BLIDQ8IZY5 108 aa10.43□□□□□ -0.74
SYN3-211ENST00000472027 GTF3C6Q969F1 213 aa10.43□□□□□ -0.74
SYN3-211ENST00000472027 CTAGE1Q96RT6 745 aa10.43□□□□□ -0.74
SYN3-211ENST00000472027 KCNJ14Q9UNX9 436 aa10.43□□□□□ -0.74
SYN3-211ENST00000472027 LTBP2Q14767 1821 aa10.42□□□□□ -0.74
SYN3-211ENST00000472027 NFASCO94856 1347 aa10.42□□□□□ -0.74
SYN3-211ENST00000472027 IGLV3-22A0A075B6J6 115 aa10.42□□□□□ -0.74
SYN3-211ENST00000472027 M0R2N6 131 aa10.42□□□□□ -0.74
SYN3-211ENST00000472027 EDIL3O43854 480 aa10.42□□□□□ -0.74
SYN3-211ENST00000472027 ACRP10323 421 aa10.42□□□□□ -0.74
SYN3-211ENST00000472027 FDPSP14324 419 aaKnown RBP10.42□□□□□ -0.74
SYN3-211ENST00000472027 XBP1P17861 261 aa10.42□□□□□ -0.74
SYN3-211ENST00000472027 CIITAP33076 1130 aa10.42□□□□□ -0.74
SYN3-211ENST00000472027 USP11P51784 963 aa10.42□□□□□ -0.74
SYN3-211ENST00000472027 ZNF200P98182 395 aaPredicted RBP10.42□□□□□ -0.74
SYN3-211ENST00000472027 ITGB3BPQ13352 177 aaPredicted RBP10.42□□□□□ -0.74
SYN3-211ENST00000472027 BFSP2Q13515 415 aa10.42□□□□□ -0.74
SYN3-211ENST00000472027 HIC1Q14526 733 aa10.42□□□□□ -0.74
SYN3-211ENST00000472027 NPY5RQ15761 445 aa10.42□□□□□ -0.74
SYN3-211ENST00000472027 TMEM240Q5SV17 173 aa10.42□□□□□ -0.74
SYN3-211ENST00000472027 GALNT17Q6IS24 598 aa10.42□□□□□ -0.74
SYN3-211ENST00000472027 TRIM50Q86XT4 487 aa10.42□□□□□ -0.74
SYN3-211ENST00000472027 FAM177A1Q8N128 213 aaPredicted RBP10.42□□□□□ -0.74
SYN3-211ENST00000472027 RETREG2Q8NC44 543 aa10.42□□□□□ -0.74
SYN3-211ENST00000472027 DAGLBQ8NCG7 672 aa10.42□□□□□ -0.74
SYN3-211ENST00000472027 SCLYQ96I15 445 aa10.42□□□□□ -0.74
SYN3-211ENST00000472027 LRCH3Q96II8 777 aa10.42□□□□□ -0.74
SYN3-211ENST00000472027 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.42□□□□□ -0.744e-10■□□□□ 10.5
SYN3-211ENST00000472027 SDF4Q9BRK5 362 aa10.42□□□□□ -0.74
SYN3-211ENST00000472027 PHF20Q9BVI0 1012 aa10.42□□□□□ -0.74
SYN3-211ENST00000472027 WNT8AQ9H1J5 351 aa10.42□□□□□ -0.74
SYN3-211ENST00000472027 RNPEPQ9H4A4 650 aa10.42□□□□□ -0.74
SYN3-211ENST00000472027 JPH1Q9HDC5 661 aaPredicted RBP10.42□□□□□ -0.74
SYN3-211ENST00000472027 ORC3Q9UBD5 711 aaPredicted RBP10.42□□□□□ -0.74
SYN3-211ENST00000472027 SLC9A2Q9UBY0 812 aa10.42□□□□□ -0.74
SYN3-211ENST00000472027 LIMCH1Q9UPQ0 1083 aa10.42□□□□□ -0.74
SYN3-211ENST00000472027 DNAH12Q6ZR08 3092 aa10.42□□□□□ -0.74
SYN3-211ENST00000472027 SCN10AQ9Y5Y9 1956 aa10.41□□□□□ -0.74
SYN3-211ENST00000472027 MYH7BA7E2Y1 1941 aa10.41□□□□□ -0.74
SYN3-211ENST00000472027 C17orf102A2RUQ5 167 aa10.41□□□□□ -0.74
SYN3-211ENST00000472027 PITPNM1O00562 1244 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms