RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 CNKSR3Q6P9H4 555 aa25.94■■□□□ 1.74
C9orf3-213ENST00000471978 TMTC3Q6ZXV5 915 aa25.94■■□□□ 1.74
C9orf3-213ENST00000471978 MICU3Q86XE3 530 aa25.94■■□□□ 1.74
C9orf3-213ENST00000471978 USP26Q9BXU7 913 aa25.94■■□□□ 1.74
C9orf3-213ENST00000471978 KIF28PB7ZC32 967 aa25.93■■□□□ 1.74
C9orf3-213ENST00000471978 WDR5P61964 334 aaKnown RBP25.93■■□□□ 1.74
C9orf3-213ENST00000471978 CCDC85BQ15834 202 aaPredicted RBP25.93■■□□□ 1.74
C9orf3-213ENST00000471978 ZNF618Q5T7W0 954 aa25.93■■□□□ 1.74
C9orf3-213ENST00000471978 SYNE3Q6ZMZ3 975 aa25.93■■□□□ 1.74
C9orf3-213ENST00000471978 NEK1Q96PY6 1258 aa25.93■■□□□ 1.74
C9orf3-213ENST00000471978 GPR20Q99678 358 aa25.93■■□□□ 1.74
C9orf3-213ENST00000471978 C17orf102A2RUQ5 167 aa25.92■■□□□ 1.74
C9orf3-213ENST00000471978 SMIM10L2AP0DMW4 78 aa25.92■■□□□ 1.74
C9orf3-213ENST00000471978 SMIM10L2BP0DMW5 78 aa25.92■■□□□ 1.74
C9orf3-213ENST00000471978 TRAF7Q6Q0C0 670 aa25.92■■□□□ 1.74
C9orf3-213ENST00000471978 NLRX1Q86UT6 975 aa25.92■■□□□ 1.74
C9orf3-213ENST00000471978 SERINC5Q86VE9 423 aa25.92■■□□□ 1.74
C9orf3-213ENST00000471978 ATP6V0A1Q93050 837 aa25.92■■□□□ 1.74
C9orf3-213ENST00000471978 PRDM6Q9NQX0 595 aa25.92■■□□□ 1.74
C9orf3-213ENST00000471978 REV3LO60673 3130 aa25.91■■□□□ 1.74
C9orf3-213ENST00000471978 THPOP40225 353 aa25.91■■□□□ 1.74
C9orf3-213ENST00000471978 SENP7Q9BQF6 1050 aa25.91■■□□□ 1.74
C9orf3-213ENST00000471978 CDC45O75419 566 aa25.9■■□□□ 1.74
C9orf3-213ENST00000471978 SP4Q02446 784 aa25.9■■□□□ 1.74
C9orf3-213ENST00000471978 MBTPS1Q14703 1052 aa25.9■■□□□ 1.74
C9orf3-213ENST00000471978 UBE2SQ16763 222 aa25.9■■□□□ 1.74
C9orf3-213ENST00000471978 TCTN1Q2MV58 587 aa25.9■■□□□ 1.74
C9orf3-213ENST00000471978 HEATR3Q7Z4Q2 680 aa25.9■■□□□ 1.74
C9orf3-213ENST00000471978 CERS4Q9HA82 394 aa25.9■■□□□ 1.74
C9orf3-213ENST00000471978 ABHD14A-ACY1A0A1B0GW23 586 aa25.89■■□□□ 1.74
C9orf3-213ENST00000471978 TLL1O43897 1013 aa25.89■■□□□ 1.74
C9orf3-213ENST00000471978 HOXC8P31273 242 aa25.89■■□□□ 1.74
C9orf3-213ENST00000471978 EXOSC10Q01780 885 aaKnown RBP25.89■■□□□ 1.74
C9orf3-213ENST00000471978 UTP14CQ5TAP6 766 aaKnown RBP25.89■■□□□ 1.74
C9orf3-213ENST00000471978 APOA5Q6Q788 366 aa25.89■■□□□ 1.74
C9orf3-213ENST00000471978 DHX32Q7L7V1 743 aaKnown RBP25.89■■□□□ 1.74
C9orf3-213ENST00000471978 RASEFQ8IZ41 740 aa25.89■■□□□ 1.74
C9orf3-213ENST00000471978 GIMAP8Q8ND71 665 aaPredicted RBP25.89■■□□□ 1.74
C9orf3-213ENST00000471978 TCEANC2Q96MN5 208 aa25.89■■□□□ 1.74
C9orf3-213ENST00000471978 RNPEPQ9H4A4 650 aa25.89■■□□□ 1.74
C9orf3-213ENST00000471978 TELO2Q9Y4R8 837 aa25.89■■□□□ 1.74
C9orf3-213ENST00000471978 DOCK5Q9H7D0 1870 aa25.88■■□□□ 1.73
C9orf3-213ENST00000471978 SPDYE3A6NKU9 549 aa25.88■■□□□ 1.73
C9orf3-213ENST00000471978 RSPH10B2B2RC85 870 aa25.88■■□□□ 1.73
C9orf3-213ENST00000471978 RFXAPO00287 272 aa25.88■■□□□ 1.73
C9orf3-213ENST00000471978 TREHO43280 583 aa25.88■■□□□ 1.73
C9orf3-213ENST00000471978 RSPH10BP0C881 870 aa25.88■■□□□ 1.73
C9orf3-213ENST00000471978 DEFB103AP81534 67 aa25.88■■□□□ 1.73
C9orf3-213ENST00000471978 TAP1Q03518 808 aa25.88■■□□□ 1.73
C9orf3-213ENST00000471978 IKBKEQ14164 716 aa25.88■■□□□ 1.73
C9orf3-213ENST00000471978 ADCK5Q3MIX3 580 aa25.88■■□□□ 1.73
C9orf3-213ENST00000471978 TSGA10IPQ3SY00 556 aa25.88■■□□□ 1.73
C9orf3-213ENST00000471978 TJAP1Q5JTD0 557 aa25.88■■□□□ 1.73
C9orf3-213ENST00000471978 TMCO2Q7Z6W1 182 aaPredicted RBP25.88■■□□□ 1.73
C9orf3-213ENST00000471978 TRIM50Q86XT4 487 aa25.88■■□□□ 1.73
C9orf3-213ENST00000471978 SYMPKQ92797 1274 aaKnown RBP25.88■■□□□ 1.73
C9orf3-213ENST00000471978 GPRASP2Q96D09 838 aa25.88■■□□□ 1.73
C9orf3-213ENST00000471978 CDHR1Q96JP9 859 aa25.88■■□□□ 1.73
C9orf3-213ENST00000471978 ZBED2Q9BTP6 218 aa25.88■■□□□ 1.73
C9orf3-213ENST00000471978 RBM28Q9NW13 759 aaKnown RBP25.88■■□□□ 1.73
C9orf3-213ENST00000471978 ZNF215Q9UL58 517 aaPredicted RBP25.88■■□□□ 1.73
C9orf3-213ENST00000471978 TTC28Q96AY4 2481 aa25.88■■□□□ 1.73
C9orf3-213ENST00000471978 EMSYQ7Z589 1322 aa25.88■■□□□ 1.73
C9orf3-213ENST00000471978 EFCAB14O75071 495 aa25.87■■□□□ 1.73
C9orf3-213ENST00000471978 LGR5O75473 907 aa25.87■■□□□ 1.73
C9orf3-213ENST00000471978 ARHGEF15O94989 841 aa25.87■■□□□ 1.73
C9orf3-213ENST00000471978 GNAT1P11488 350 aa25.87■■□□□ 1.73
C9orf3-213ENST00000471978 MICALL1Q8N3F8 863 aa25.87■■□□□ 1.73
C9orf3-213ENST00000471978 SETD4Q9NVD3 440 aa25.87■■□□□ 1.73
C9orf3-213ENST00000471978 BRPF3Q9ULD4 1205 aa25.87■■□□□ 1.73
C9orf3-213ENST00000471978 PCDHA6Q9UN73 950 aa25.87■■□□□ 1.73
C9orf3-213ENST00000471978 PCDHA8Q9Y5H6 950 aa25.87■■□□□ 1.73
C9orf3-213ENST00000471978 RBAK-RBAKDNI3L0D1 243 aa25.86■■□□□ 1.73
C9orf3-213ENST00000471978 ZBTB43O43298 467 aa25.86■■□□□ 1.73
C9orf3-213ENST00000471978 ATP9AO75110 1047 aa25.86■■□□□ 1.73
C9orf3-213ENST00000471978 ITGB5P18084 799 aa25.86■■□□□ 1.73
C9orf3-213ENST00000471978 KRT32Q14532 448 aa25.86■■□□□ 1.73
C9orf3-213ENST00000471978 RTN1Q16799 776 aa25.86■■□□□ 1.73
C9orf3-213ENST00000471978 ARNTL2Q8WYA1 636 aa25.86■■□□□ 1.73
C9orf3-213ENST00000471978 THEGQ9P2T0 379 aa25.86■■□□□ 1.73
C9orf3-213ENST00000471978 PTPRSQ13332 1948 aa25.86■■□□□ 1.73
C9orf3-213ENST00000471978 CNTNAP5Q8WYK1 1306 aa25.86■■□□□ 1.73
C9orf3-213ENST00000471978 XIRP2A4UGR9 3374 aa25.86■■□□□ 1.73
C9orf3-213ENST00000471978 EPOPA6NHQ4 379 aa25.85■■□□□ 1.73
C9orf3-213ENST00000471978 KCNA2P16389 499 aa25.85■■□□□ 1.73
C9orf3-213ENST00000471978 MTMR1Q13613 665 aa25.85■■□□□ 1.73
C9orf3-213ENST00000471978 WWC2Q6AWC2 1192 aa25.85■■□□□ 1.73
C9orf3-213ENST00000471978 ATXN2LQ8WWM7 1075 aaKnown RBP25.85■■□□□ 1.73
C9orf3-213ENST00000471978 UBIAD1Q9Y5Z9 338 aa25.85■■□□□ 1.73
C9orf3-213ENST00000471978 LCHNA4D1U4 455 aa25.84■■□□□ 1.73
C9orf3-213ENST00000471978 TCF7P36402 384 aaPredicted RBP25.84■■□□□ 1.73
C9orf3-213ENST00000471978 EHMT1Q9H9B1 1298 aa25.84■■□□□ 1.73
C9orf3-213ENST00000471978 PKD2L1Q9P0L9 805 aa25.84■■□□□ 1.73
C9orf3-213ENST00000471978 GTPBP6O43824 516 aaPredicted RBP25.83■■□□□ 1.73
C9orf3-213ENST00000471978 CAND2O75155 1236 aa25.83■■□□□ 1.73
C9orf3-213ENST00000471978 GJB5O95377 273 aa25.83■■□□□ 1.73
C9orf3-213ENST00000471978 POU3F3P20264 500 aaPredicted RBP25.83■■□□□ 1.73
C9orf3-213ENST00000471978 NAPAP54920 295 aa25.83■■□□□ 1.73
C9orf3-213ENST00000471978 FUT2Q10981 343 aa25.83■■□□□ 1.73
C9orf3-213ENST00000471978 DBF4BQ8NFT6 615 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms