RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 SMIM10L2AP0DMW4 78 aa23.04■■□□□ 1.28
CCDC78-208ENST00000471861 SMIM10L2BP0DMW5 78 aa23.04■■□□□ 1.28
CCDC78-208ENST00000471861 IRS1P35568 1242 aa23.04■■□□□ 1.28
CCDC78-208ENST00000471861 PGM5Q15124 567 aa23.04■■□□□ 1.28
CCDC78-208ENST00000471861 EP400NLQ6ZTU2 488 aa23.04■■□□□ 1.28
CCDC78-208ENST00000471861 STOX1Q6ZVD7 989 aa23.04■■□□□ 1.28
CCDC78-208ENST00000471861 RPAINQ86UA6 219 aa23.04■■□□□ 1.28
CCDC78-208ENST00000471861 VSIG10LQ86VR7 867 aa23.04■■□□□ 1.28
CCDC78-208ENST00000471861 STAG2Q8N3U4 1231 aa23.04■■□□□ 1.28
CCDC78-208ENST00000471861 SEPT8Q92599 483 aa23.04■■□□□ 1.28
CCDC78-208ENST00000471861 ZSCAN10Q96SZ4 725 aaPredicted RBP23.04■■□□□ 1.28
CCDC78-208ENST00000471861 CLDND1Q9NY35 253 aa23.04■■□□□ 1.28
CCDC78-208ENST00000471861 B4E1Z4 1266 aa23.03■■□□□ 1.28
CCDC78-208ENST00000471861 DHX16O60231 1041 aaKnown RBP23.03■■□□□ 1.28
CCDC78-208ENST00000471861 LGALS2P05162 132 aa23.03■■□□□ 1.28
CCDC78-208ENST00000471861 PARP1P09874 1014 aaKnown RBP23.03■■□□□ 1.28
CCDC78-208ENST00000471861 HOXA13P31271 388 aaPredicted RBP23.03■■□□□ 1.28
CCDC78-208ENST00000471861 DLX2Q07687 328 aaPredicted RBP23.03■■□□□ 1.28
CCDC78-208ENST00000471861 CTC1Q2NKJ3 1217 aa23.03■■□□□ 1.28
CCDC78-208ENST00000471861 IQCA1Q86XH1 822 aa23.03■■□□□ 1.28
CCDC78-208ENST00000471861 AMNQ9BXJ7 453 aa23.03■■□□□ 1.28
CCDC78-208ENST00000471861 IFIH1Q9BYX4 1025 aaKnown RBP23.03■■□□□ 1.28
CCDC78-208ENST00000471861 RNPEPQ9H4A4 650 aa23.03■■□□□ 1.28
CCDC78-208ENST00000471861 H3BRB1 525 aa23.02■■□□□ 1.28
CCDC78-208ENST00000471861 DIEXFQ68CQ4 756 aaKnown RBP23.02■■□□□ 1.28
CCDC78-208ENST00000471861 TICAM2Q86XR7 235 aa23.02■■□□□ 1.28
CCDC78-208ENST00000471861 MTMR8Q96EF0 704 aa23.02■■□□□ 1.28
CCDC78-208ENST00000471861 KCNH6Q9H252 994 aa23.02■■□□□ 1.28
CCDC78-208ENST00000471861 TUT1Q9H6E5 874 aaKnown RBP23.02■■□□□ 1.28
CCDC78-208ENST00000471861 ZNF213O14771 459 aa23.01■■□□□ 1.27
CCDC78-208ENST00000471861 CAND2O75155 1236 aa23.01■■□□□ 1.27
CCDC78-208ENST00000471861 HYAL1Q12794 435 aa23.01■■□□□ 1.27
CCDC78-208ENST00000471861 SLC35G1Q2M3R5 365 aa23.01■■□□□ 1.27
CCDC78-208ENST00000471861 KCNV1Q6PIU1 500 aa23.01■■□□□ 1.27
CCDC78-208ENST00000471861 FAM50BQ9Y247 325 aa23.01■■□□□ 1.27
CCDC78-208ENST00000471861 TELO2Q9Y4R8 837 aa23.01■■□□□ 1.27
CCDC78-208ENST00000471861 C5orf67F2Z3F1 127 aa23■■□□□ 1.27
CCDC78-208ENST00000471861 SMAD2Q15796 467 aaKnown RBP23■■□□□ 1.27
CCDC78-208ENST00000471861 CLUL1Q15846 466 aa23■■□□□ 1.27
CCDC78-208ENST00000471861 CCDC178Q5BJE1 867 aa23■■□□□ 1.27
CCDC78-208ENST00000471861 RC3H2Q9HBD1 1191 aaKnown RBP23■■□□□ 1.27
CCDC78-208ENST00000471861 ZSWIM5Q9P217 1185 aa23■■□□□ 1.27
CCDC78-208ENST00000471861 GRM6O15303 877 aa22.99■■□□□ 1.27
CCDC78-208ENST00000471861 TBX10O75333 385 aa22.99■■□□□ 1.27
CCDC78-208ENST00000471861 TGFB3P10600 412 aa22.99■■□□□ 1.27
CCDC78-208ENST00000471861 CTNNB1P35222 781 aa22.99■■□□□ 1.27
CCDC78-208ENST00000471861 ADAM17P78536 824 aa22.99■■□□□ 1.27
CCDC78-208ENST00000471861 TRIM50Q86XT4 487 aa22.99■■□□□ 1.27
CCDC78-208ENST00000471861 MLXIPQ9HAP2 919 aa22.99■■□□□ 1.27
CCDC78-208ENST00000471861 SETD4Q9NVD3 440 aa22.99■■□□□ 1.27
CCDC78-208ENST00000471861 MUTYHQ9UIF7 546 aa22.99■■□□□ 1.27
CCDC78-208ENST00000471861 TRIM6-TRIM34B2RNG4 842 aa22.98■■□□□ 1.27
CCDC78-208ENST00000471861 MBTPS2O43462 519 aa22.98■■□□□ 1.27
CCDC78-208ENST00000471861 GTF2F1P35269 517 aaKnown RBP eCLIP22.98■■□□□ 1.27
CCDC78-208ENST00000471861 NT5C2P49902 561 aa22.98■■□□□ 1.27
CCDC78-208ENST00000471861 MAP3K20Q9NYL2 800 aaKnown RBP22.98■■□□□ 1.27
CCDC78-208ENST00000471861 SUPT16HQ9Y5B9 1047 aaKnown RBP22.98■■□□□ 1.27
CCDC78-208ENST00000471861 PCDHA1Q9Y5I3 950 aa22.98■■□□□ 1.27
CCDC78-208ENST00000471861 TECTAO75443 2155 aa22.98■■□□□ 1.27
CCDC78-208ENST00000471861 DOCK5Q9H7D0 1870 aa22.97■■□□□ 1.27
CCDC78-208ENST00000471861 ZBTB5O15062 677 aa22.97■■□□□ 1.27
CCDC78-208ENST00000471861 SDSP20132 328 aa22.97■■□□□ 1.27
CCDC78-208ENST00000471861 CCND2P30279 289 aa22.97■■□□□ 1.27
CCDC78-208ENST00000471861 SEMA3FQ13275 785 aa22.97■■□□□ 1.27
CCDC78-208ENST00000471861 HERC4Q5GLZ8 1057 aaPredicted RBP22.97■■□□□ 1.27
CCDC78-208ENST00000471861 FAM26DQ5JW98 314 aa22.97■■□□□ 1.27
CCDC78-208ENST00000471861 FIBCD1Q8N539 461 aa22.97■■□□□ 1.27
CCDC78-208ENST00000471861 APBB2Q92870 758 aa22.97■■□□□ 1.27
CCDC78-208ENST00000471861 IL17RAQ96F46 866 aa22.97■■□□□ 1.27
CCDC78-208ENST00000471861 PHOX2BQ99453 314 aa22.97■■□□□ 1.27
CCDC78-208ENST00000471861 MAD2L2Q9UI95 211 aa22.97■■□□□ 1.27
CCDC78-208ENST00000471861 KLRF2D3W0D1 207 aa22.96■■□□□ 1.27
CCDC78-208ENST00000471861 LINC01565O15544 149 aa22.96■■□□□ 1.27
CCDC78-208ENST00000471861 BMPR1AP36894 532 aa22.96■■□□□ 1.27
CCDC78-208ENST00000471861 MRPS9P82933 396 aaKnown RBP22.96■■□□□ 1.27
CCDC78-208ENST00000471861 LMBR1Q8WVP7 490 aa22.96■■□□□ 1.27
CCDC78-208ENST00000471861 RILPL2Q969X0 211 aa22.96■■□□□ 1.27
CCDC78-208ENST00000471861 ZBTB47Q9UFB7 747 aaPredicted RBP22.96■■□□□ 1.27
CCDC78-208ENST00000471861 ADGRA3Q8IWK6 1321 aa22.96■■□□□ 1.27
CCDC78-208ENST00000471861 CSPG5O95196 566 aa22.95■■□□□ 1.26
CCDC78-208ENST00000471861 CHRNA1P02708 482 aa22.95■■□□□ 1.26
CCDC78-208ENST00000471861 MFAP1P55081 439 aaKnown RBP22.95■■□□□ 1.26
CCDC78-208ENST00000471861 FRMPD4Q14CM0 1322 aa22.95■■□□□ 1.26
CCDC78-208ENST00000471861 USP34Q70CQ2 3546 aa22.95■■□□□ 1.26
CCDC78-208ENST00000471861 FCHSD1Q86WN1 690 aa22.95■■□□□ 1.26
CCDC78-208ENST00000471861 INPP4AQ96PE3 977 aaPredicted RBP22.95■■□□□ 1.26
CCDC78-208ENST00000471861 GPR20Q99678 358 aa22.95■■□□□ 1.26
CCDC78-208ENST00000471861 C11orf84Q9BUA3 381 aaPredicted RBP22.95■■□□□ 1.26
CCDC78-208ENST00000471861 LMAN2LQ9H0V9 348 aa22.95■■□□□ 1.26
CCDC78-208ENST00000471861 NOP56O00567 594 aaKnown RBP22.94■■□□□ 1.26
CCDC78-208ENST00000471861 NCK2O43639 380 aa22.94■■□□□ 1.26
CCDC78-208ENST00000471861 RB1P06400 928 aa22.94■■□□□ 1.26
CCDC78-208ENST00000471861 SMAD4Q13485 552 aaKnown RBP22.94■■□□□ 1.26
CCDC78-208ENST00000471861 CAMK1Q14012 370 aa22.94■■□□□ 1.26
CCDC78-208ENST00000471861 SEC23AQ15436 765 aa22.94■■□□□ 1.26
CCDC78-208ENST00000471861 METTL7BQ6UX53 244 aa22.94■■□□□ 1.26
CCDC78-208ENST00000471861 CYFIP1Q7L576 1253 aa22.94■■□□□ 1.26
CCDC78-208ENST00000471861 RNF135Q8IUD6 432 aa22.94■■□□□ 1.26
CCDC78-208ENST00000471861 SAMD3Q8N6K7 520 aa22.94■■□□□ 1.26
CCDC78-208ENST00000471861 PRSS33Q8NF86 280 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms