RNA–Protein interactions for RNA: ENST00000471259.1

MRPL40-203, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-203ENST00000471259 IL17RAQ96F46 866 aa13.15□□□□□ -0.3
MRPL40-203ENST00000471259 PDCD2LQ9BRP1 358 aa13.15□□□□□ -0.3
MRPL40-203ENST00000471259 TUT1Q9H6E5 874 aaKnown RBP13.15□□□□□ -0.3
MRPL40-203ENST00000471259 ZNF215Q9UL58 517 aaPredicted RBP13.15□□□□□ -0.3
MRPL40-203ENST00000471259 MYH7BA7E2Y1 1941 aa13.15□□□□□ -0.3
MRPL40-203ENST00000471259 COL4A6Q14031 1691 aa13.15□□□□□ -0.31
MRPL40-203ENST00000471259 MYH6P13533 1939 aa13.14□□□□□ -0.31
MRPL40-203ENST00000471259 C19orf67A6NJJ6 358 aa13.14□□□□□ -0.31
MRPL40-203ENST00000471259 UPP2O95045 317 aa13.14□□□□□ -0.31
MRPL40-203ENST00000471259 RPLP2P05387 115 aaKnown RBP13.14□□□□□ -0.31
MRPL40-203ENST00000471259 GHRHRQ02643 423 aa13.14□□□□□ -0.31
MRPL40-203ENST00000471259 NEDD9Q14511 834 aa13.14□□□□□ -0.31
MRPL40-203ENST00000471259 COL19A1Q14993 1142 aa13.14□□□□□ -0.31
MRPL40-203ENST00000471259 ANKRD45Q5TZF3 282 aa13.14□□□□□ -0.31
MRPL40-203ENST00000471259 RSPH3Q86UC2 560 aa13.14□□□□□ -0.31
MRPL40-203ENST00000471259 TBC1D5Q92609 795 aa13.14□□□□□ -0.31
MRPL40-203ENST00000471259 ANKS1AQ92625 1134 aa13.14□□□□□ -0.31
MRPL40-203ENST00000471259 FBXL18Q96ME1 805 aa13.14□□□□□ -0.31
MRPL40-203ENST00000471259 KRT23Q9C075 422 aa13.14□□□□□ -0.31
MRPL40-203ENST00000471259 IRF2BPLQ9H1B7 796 aa13.14□□□□□ -0.31
MRPL40-203ENST00000471259 CNNM2Q9H8M5 875 aa13.14□□□□□ -0.31
MRPL40-203ENST00000471259 VAT1LQ9HCJ6 419 aa13.14□□□□□ -0.31
MRPL40-203ENST00000471259 COL20A1Q9P218 1284 aa13.14□□□□□ -0.31
MRPL40-203ENST00000471259 RALGAPA2Q2PPJ7 1873 aa13.13□□□□□ -0.31
MRPL40-203ENST00000471259 C5orf67F2Z3F1 127 aa13.13□□□□□ -0.31
MRPL40-203ENST00000471259 CTNNB1P35222 781 aa13.13□□□□□ -0.31
MRPL40-203ENST00000471259 MBTPS1Q14703 1052 aa13.13□□□□□ -0.31
MRPL40-203ENST00000471259 SMAD2Q15796 467 aaKnown RBP13.13□□□□□ -0.31
MRPL40-203ENST00000471259 HSDL1Q3SXM5 330 aa13.13□□□□□ -0.31
MRPL40-203ENST00000471259 STOX1Q6ZVD7 989 aa13.13□□□□□ -0.31
MRPL40-203ENST00000471259 RPAINQ86UA6 219 aa13.13□□□□□ -0.31
MRPL40-203ENST00000471259 VSIG10LQ86VR7 867 aa13.13□□□□□ -0.31
MRPL40-203ENST00000471259 ZSCAN10Q96SZ4 725 aaPredicted RBP13.13□□□□□ -0.31
MRPL40-203ENST00000471259 ZKSCAN3Q9BRR0 538 aa13.13□□□□□ -0.31
MRPL40-203ENST00000471259 UBAC1Q9BSL1 405 aa13.13□□□□□ -0.31
MRPL40-203ENST00000471259 PLVAPQ9BX97 442 aa13.13□□□□□ -0.31
MRPL40-203ENST00000471259 A0A0D9SFI3 127 aa13.12□□□□□ -0.31
MRPL40-203ENST00000471259 FSD2A1L4K1 749 aa13.12□□□□□ -0.31
MRPL40-203ENST00000471259 GCOM1H8Y6P7 765 aaPredicted RBP13.12□□□□□ -0.31
MRPL40-203ENST00000471259 HIP1O00291 1037 aa13.12□□□□□ -0.31
MRPL40-203ENST00000471259 KDM4AO75164 1064 aa13.12□□□□□ -0.31
MRPL40-203ENST00000471259 POLR2MP0CAP2 368 aa13.12□□□□□ -0.31
MRPL40-203ENST00000471259 SMIM10L2AP0DMW4 78 aa13.12□□□□□ -0.31
MRPL40-203ENST00000471259 SMIM10L2BP0DMW5 78 aa13.12□□□□□ -0.31
MRPL40-203ENST00000471259 PDE1AP54750 535 aa13.12□□□□□ -0.31
MRPL40-203ENST00000471259 PTPN5P54829 565 aa13.12□□□□□ -0.31
MRPL40-203ENST00000471259 ZNF200P98182 395 aaPredicted RBP13.12□□□□□ -0.31
MRPL40-203ENST00000471259 SMAD4Q13485 552 aaKnown RBP13.12□□□□□ -0.31
MRPL40-203ENST00000471259 PGM5Q15124 567 aa13.12□□□□□ -0.31
MRPL40-203ENST00000471259 IMMTQ16891 758 aaKnown RBP13.12□□□□□ -0.31
MRPL40-203ENST00000471259 TCTN1Q2MV58 587 aa13.12□□□□□ -0.31
MRPL40-203ENST00000471259 NAALADL2Q58DX5 795 aa13.12□□□□□ -0.31
MRPL40-203ENST00000471259 HERC4Q5GLZ8 1057 aaPredicted RBP13.12□□□□□ -0.31
MRPL40-203ENST00000471259 OTUD7AQ8TE49 926 aaPredicted RBP13.12□□□□□ -0.31
MRPL40-203ENST00000471259 FAM227BQ96M60 508 aa13.12□□□□□ -0.31
MRPL40-203ENST00000471259 C16orf70Q9BSU1 422 aa13.12□□□□□ -0.31
MRPL40-203ENST00000471259 JMJD4Q9H9V9 463 aa13.12□□□□□ -0.31
MRPL40-203ENST00000471259 PCDHA1Q9Y5I3 950 aa13.12□□□□□ -0.31
MRPL40-203ENST00000471259 ZBTB5O15062 677 aa13.11□□□□□ -0.31
MRPL40-203ENST00000471259 LGALS2P05162 132 aa13.11□□□□□ -0.31
MRPL40-203ENST00000471259 UBA1P22314 1058 aaKnown RBP13.11□□□□□ -0.31
MRPL40-203ENST00000471259 HOXC8P31273 242 aa13.11□□□□□ -0.31
MRPL40-203ENST00000471259 BMPR1AP36894 532 aa13.11□□□□□ -0.31
MRPL40-203ENST00000471259 NMIQ13287 307 aaPredicted RBP13.11□□□□□ -0.31
MRPL40-203ENST00000471259 IFIT1BQ5T764 474 aaKnown RBP13.11□□□□□ -0.31
MRPL40-203ENST00000471259 TAF2Q6P1X5 1199 aa13.11□□□□□ -0.31
MRPL40-203ENST00000471259 METTL7BQ6UX53 244 aa13.11□□□□□ -0.31
MRPL40-203ENST00000471259 FAM43BQ6ZT52 329 aaPredicted RBP13.11□□□□□ -0.31
MRPL40-203ENST00000471259 BMP8AQ7Z5Y6 402 aa13.11□□□□□ -0.31
MRPL40-203ENST00000471259 SUGP1Q8IWZ8 645 aaKnown RBP13.11□□□□□ -0.31
MRPL40-203ENST00000471259 GIMAP8Q8ND71 665 aaPredicted RBP13.11□□□□□ -0.31
MRPL40-203ENST00000471259 TNPO1Q92973 898 aaKnown RBP13.11□□□□□ -0.31
MRPL40-203ENST00000471259 WNT8BQ93098 351 aa13.11□□□□□ -0.31
MRPL40-203ENST00000471259 RILPL2Q969X0 211 aa13.11□□□□□ -0.31
MRPL40-203ENST00000471259 CPVLQ9H3G5 476 aa13.11□□□□□ -0.31
MRPL40-203ENST00000471259 RNPEPQ9H4A4 650 aa13.11□□□□□ -0.31
MRPL40-203ENST00000471259 SALL3Q9BXA9 1300 aa13.11□□□□□ -0.31
MRPL40-203ENST00000471259 NLRC5Q86WI3 1866 aa13.1□□□□□ -0.31
MRPL40-203ENST00000471259 KLRF2D3W0D1 207 aa13.1□□□□□ -0.31
MRPL40-203ENST00000471259 STXBP3O00186 592 aa13.1□□□□□ -0.31
MRPL40-203ENST00000471259 TREHO43280 583 aa13.1□□□□□ -0.31
MRPL40-203ENST00000471259 MBTPS2O43462 519 aa13.1□□□□□ -0.31
MRPL40-203ENST00000471259 CTSHP09668 335 aa13.1□□□□□ -0.31
MRPL40-203ENST00000471259 IRS1P35568 1242 aa13.1□□□□□ -0.31
MRPL40-203ENST00000471259 CTC1Q2NKJ3 1217 aa13.1□□□□□ -0.31
MRPL40-203ENST00000471259 FAM26DQ5JW98 314 aa13.1□□□□□ -0.31
MRPL40-203ENST00000471259 HFE2Q6ZVN8 426 aa13.1□□□□□ -0.31
MRPL40-203ENST00000471259 TBC1D10CQ8IV04 446 aa13.1□□□□□ -0.31
MRPL40-203ENST00000471259 CD207Q9UJ71 328 aa13.1□□□□□ -0.31
MRPL40-203ENST00000471259 NEDD4P46934 1319 aa13.1□□□□□ -0.31
MRPL40-203ENST00000471259 ADGRA3Q8IWK6 1321 aa13.1□□□□□ -0.31
MRPL40-203ENST00000471259 NRCAMQ92823 1304 aa13.1□□□□□ -0.31
MRPL40-203ENST00000471259 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.09□□□□□ -0.31
MRPL40-203ENST00000471259 FIBPO43427 364 aa13.09□□□□□ -0.31
MRPL40-203ENST00000471259 NDUFV1P49821 464 aa13.09□□□□□ -0.31
MRPL40-203ENST00000471259 TRDNQ13061 729 aa13.09□□□□□ -0.31
MRPL40-203ENST00000471259 BTG3Q14201 252 aaPredicted RBP13.09□□□□□ -0.31
MRPL40-203ENST00000471259 ZNF589Q86UQ0 364 aaPredicted RBP13.09□□□□□ -0.31
MRPL40-203ENST00000471259 ENAHQ8N8S7 591 aaPredicted RBP13.09□□□□□ -0.31
MRPL40-203ENST00000471259 EDAQ92838 391 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms