RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 SCN7AQ01118 1682 aa8.61□□□□□ -1.03
PTP4A1-202ENST00000470661 COL11A2P13942 1736 aaPredicted RBP8.6□□□□□ -1.03
PTP4A1-202ENST00000470661 NUP98P52948 1817 aa8.6□□□□□ -1.03
PTP4A1-202ENST00000470661 NTSR2O95665 410 aa8.6□□□□□ -1.03
PTP4A1-202ENST00000470661 GJA8P48165 433 aa8.6□□□□□ -1.03
PTP4A1-202ENST00000470661 HTRA3P83110 453 aa8.6□□□□□ -1.03
PTP4A1-202ENST00000470661 RUFY4Q6ZNE9 571 aa8.6□□□□□ -1.03
PTP4A1-202ENST00000470661 THAP5Q7Z6K1 395 aa8.6□□□□□ -1.03
PTP4A1-202ENST00000470661 NLRP10Q86W26 655 aa8.6□□□□□ -1.03
PTP4A1-202ENST00000470661 PI4K2BQ8TCG2 481 aa8.6□□□□□ -1.03
PTP4A1-202ENST00000470661 VWCEQ96DN2 955 aa8.6□□□□□ -1.03
PTP4A1-202ENST00000470661 IFT57Q9NWB7 429 aa8.6□□□□□ -1.03
PTP4A1-202ENST00000470661 KCNH3Q9ULD8 1083 aa8.6□□□□□ -1.03
PTP4A1-202ENST00000470661 BCORQ6W2J9 1755 aa8.6□□□□□ -1.03
PTP4A1-202ENST00000470661 TNFRSF10CO14798 259 aa8.59□□□□□ -1.03
PTP4A1-202ENST00000470661 RNASE1P07998 156 aaKnown RBP8.59□□□□□ -1.03
PTP4A1-202ENST00000470661 ACRP10323 421 aa8.59□□□□□ -1.03
PTP4A1-202ENST00000470661 IMPDH2P12268 514 aa8.59□□□□□ -1.03
PTP4A1-202ENST00000470661 SOX9P48436 509 aa8.59□□□□□ -1.03
PTP4A1-202ENST00000470661 GNAI1P63096 354 aa8.59□□□□□ -1.03
PTP4A1-202ENST00000470661 TCIRG1Q13488 830 aa8.59□□□□□ -1.03
PTP4A1-202ENST00000470661 STYK1Q6J9G0 422 aa8.59□□□□□ -1.03
PTP4A1-202ENST00000470661 CBLL1Q75N03 491 aa8.59□□□□□ -1.03
PTP4A1-202ENST00000470661 TMEM192Q8IY95 271 aa8.59□□□□□ -1.03
PTP4A1-202ENST00000470661 RASGRP4Q8TDF6 673 aa8.59□□□□□ -1.03
PTP4A1-202ENST00000470661 FAM89AQ96GI7 184 aa8.59□□□□□ -1.03
PTP4A1-202ENST00000470661 UTP14AQ9BVJ6 771 aaKnown RBP8.59□□□□□ -1.03
PTP4A1-202ENST00000470661 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.59□□□□□ -1.032e-13■■■□□ 15.4
PTP4A1-202ENST00000470661 BABAM1Q9NWV8 329 aa8.59□□□□□ -1.03
PTP4A1-202ENST00000470661 CACNA1SQ13698 1873 aa8.59□□□□□ -1.03
PTP4A1-202ENST00000470661 CCDC88AQ3V6T2 1871 aa8.59□□□□□ -1.03
PTP4A1-202ENST00000470661 LAMB4A4D0S4 1761 aa8.58□□□□□ -1.04
PTP4A1-202ENST00000470661 SBF1O95248 1867 aa8.58□□□□□ -1.04
PTP4A1-202ENST00000470661 SHISA3A0PJX4 238 aa8.58□□□□□ -1.04
PTP4A1-202ENST00000470661 KLRG2A4D1S0 409 aaPredicted RBP8.58□□□□□ -1.04
PTP4A1-202ENST00000470661 CLEC3AO75596 197 aa8.58□□□□□ -1.04
PTP4A1-202ENST00000470661 NPR1P16066 1061 aa8.58□□□□□ -1.04
PTP4A1-202ENST00000470661 NASPP49321 788 aaPredicted RBP8.58□□□□□ -1.04
PTP4A1-202ENST00000470661 RNF4P78317 190 aa8.58□□□□□ -1.04
PTP4A1-202ENST00000470661 LSRQ86X29 649 aaPredicted RBP8.58□□□□□ -1.04
PTP4A1-202ENST00000470661 SLC6A18Q96N87 628 aa8.58□□□□□ -1.04
PTP4A1-202ENST00000470661 MYD88Q99836 296 aa8.58□□□□□ -1.04
PTP4A1-202ENST00000470661 TRMT112Q9UI30 125 aaKnown RBP8.58□□□□□ -1.04
PTP4A1-202ENST00000470661 TNRC6CQ9HCJ0 1690 aaKnown RBP8.58□□□□□ -1.04
PTP4A1-202ENST00000470661 ARFGEF1Q9Y6D6 1849 aa8.57□□□□□ -1.04
PTP4A1-202ENST00000470661 DDNO94850 711 aaPredicted RBP8.57□□□□□ -1.04
PTP4A1-202ENST00000470661 TPP2P29144 1249 aaPredicted RBP8.57□□□□□ -1.04
PTP4A1-202ENST00000470661 EXOSC9Q06265 439 aaKnown RBP8.57□□□□□ -1.04
PTP4A1-202ENST00000470661 COL9A2Q14055 689 aaPredicted RBP8.57□□□□□ -1.04
PTP4A1-202ENST00000470661 NBPF12Q5TAG4 269 aaPredicted RBP8.57□□□□□ -1.04
PTP4A1-202ENST00000470661 MCTP1Q6DN14 999 aa8.57□□□□□ -1.04
PTP4A1-202ENST00000470661 SLC23A3Q6PIS1 610 aa8.57□□□□□ -1.04
PTP4A1-202ENST00000470661 LRRN4CLQ8ND94 238 aa8.57□□□□□ -1.04
PTP4A1-202ENST00000470661 PLBD2Q8NHP8 589 aa8.57□□□□□ -1.04
PTP4A1-202ENST00000470661 RPGRQ92834 1020 aaKnown RBP8.57□□□□□ -1.04
PTP4A1-202ENST00000470661 SPATA32Q96LK8 384 aa8.57□□□□□ -1.04
PTP4A1-202ENST00000470661 GPR62Q9BZJ7 368 aa8.57□□□□□ -1.04
PTP4A1-202ENST00000470661 TRIT1Q9H3H1 467 aaKnown RBP8.57□□□□□ -1.04
PTP4A1-202ENST00000470661 RC3H2Q9HBD1 1191 aaKnown RBP8.57□□□□□ -1.04
PTP4A1-202ENST00000470661 GPATCH2Q9NW75 528 aa8.57□□□□□ -1.04
PTP4A1-202ENST00000470661 DBF4Q9UBU7 674 aaPredicted RBP8.57□□□□□ -1.04
PTP4A1-202ENST00000470661 TAF1P21675 1872 aa8.57□□□□□ -1.04
PTP4A1-202ENST00000470661 ESR1P03372 595 aa8.56□□□□□ -1.04
PTP4A1-202ENST00000470661 SRFP11831 508 aa8.56□□□□□ -1.04
PTP4A1-202ENST00000470661 TAL1P17542 331 aaPredicted RBP8.56□□□□□ -1.04
PTP4A1-202ENST00000470661 ZYXQ15942 572 aaKnown RBP8.56□□□□□ -1.04
PTP4A1-202ENST00000470661 CREG2Q8IUH2 290 aa8.56□□□□□ -1.04
PTP4A1-202ENST00000470661 GPR101Q96P66 508 aaPredicted RBP8.56□□□□□ -1.04
PTP4A1-202ENST00000470661 ISCA1Q9BUE6 129 aa8.56□□□□□ -1.04
PTP4A1-202ENST00000470661 NYXQ9GZU5 481 aa8.56□□□□□ -1.04
PTP4A1-202ENST00000470661 TAOK3Q9H2K8 898 aa8.56□□□□□ -1.04
PTP4A1-202ENST00000470661 HYPKQ9NX55 129 aa8.56□□□□□ -1.04
PTP4A1-202ENST00000470661 ZNF541Q9H0D2 1346 aa8.55□□□□□ -1.04
PTP4A1-202ENST00000470661 FANCIQ9NVI1 1328 aa8.55□□□□□ -1.04
PTP4A1-202ENST00000470661 WTIPA6NIX2 430 aaPredicted RBP8.55□□□□□ -1.04
PTP4A1-202ENST00000470661 E9PSI1 815 aa8.55□□□□□ -1.04
PTP4A1-202ENST00000470661 CCNFP41002 786 aa8.55□□□□□ -1.04
PTP4A1-202ENST00000470661 SNW1Q13573 536 aaKnown RBP8.55□□□□□ -1.04
PTP4A1-202ENST00000470661 GAB4Q2WGN9 574 aa8.55□□□□□ -1.04
PTP4A1-202ENST00000470661 TWISTNBQ3B726 338 aaPredicted RBP8.55□□□□□ -1.04
PTP4A1-202ENST00000470661 CRY2Q49AN0 593 aa8.55□□□□□ -1.04
PTP4A1-202ENST00000470661 SLC10A5Q5PT55 438 aa8.55□□□□□ -1.04
PTP4A1-202ENST00000470661 PPP1R42Q7Z4L9 355 aa8.55□□□□□ -1.04
PTP4A1-202ENST00000470661 TMC3Q7Z5M5 1100 aa8.55□□□□□ -1.04
PTP4A1-202ENST00000470661 RBBP8NLQ8NC74 664 aaPredicted RBP8.55□□□□□ -1.04
PTP4A1-202ENST00000470661 CRBNQ96SW2 442 aa8.55□□□□□ -1.04
PTP4A1-202ENST00000470661 TM9SF2Q99805 663 aa8.55□□□□□ -1.04
PTP4A1-202ENST00000470661 SRRTQ9BXP5 876 aaKnown RBP8.55□□□□□ -1.04
PTP4A1-202ENST00000470661 MKRN2Q9H000 416 aaKnown RBP8.55□□□□□ -1.04
PTP4A1-202ENST00000470661 LMCD1Q9NZU5 365 aa8.55□□□□□ -1.04
PTP4A1-202ENST00000470661 MAP3K2Q9Y2U5 619 aa8.55□□□□□ -1.04
PTP4A1-202ENST00000470661 COL4A1P02462 1669 aa8.55□□□□□ -1.04
PTP4A1-202ENST00000470661 DLEC1Q9Y238 1755 aa8.55□□□□□ -1.04
PTP4A1-202ENST00000470661 ABCC4O15439 1325 aa8.54□□□□□ -1.04
PTP4A1-202ENST00000470661 PI4KAP2A4QPH2 592 aa8.54□□□□□ -1.04
PTP4A1-202ENST00000470661 GLTPD2A6NH11 291 aa8.54□□□□□ -1.04
PTP4A1-202ENST00000470661 VAMP4O75379 141 aa8.54□□□□□ -1.04
PTP4A1-202ENST00000470661 GUCY2CP25092 1073 aa8.54□□□□□ -1.04
PTP4A1-202ENST00000470661 ALDH1B1P30837 517 aa8.54□□□□□ -1.04
PTP4A1-202ENST00000470661 EIF6P56537 245 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms