RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 IGF2BP3O00425 579 aaKnown RBP eCLIP9.35□□□□□ -0.91
GTF3A-206ENST00000470606 CHMP2AO43633 222 aa9.35□□□□□ -0.91
GTF3A-206ENST00000470606 OSBPP22059 807 aa9.35□□□□□ -0.91
GTF3A-206ENST00000470606 CCT6AP40227 531 aaKnown RBP9.35□□□□□ -0.91
GTF3A-206ENST00000470606 SETQ01105 290 aaPredicted RBP9.35□□□□□ -0.91
GTF3A-206ENST00000470606 MTMR1Q13613 665 aa9.35□□□□□ -0.91
GTF3A-206ENST00000470606 NIPA1Q7RTP0 329 aa9.35□□□□□ -0.91
GTF3A-206ENST00000470606 ANKRD23Q86SG2 305 aa9.35□□□□□ -0.91
GTF3A-206ENST00000470606 ANKRD35Q8N283 1001 aa9.35□□□□□ -0.91
GTF3A-206ENST00000470606 ANKRD13CQ8N6S4 541 aa9.35□□□□□ -0.91
GTF3A-206ENST00000470606 NSUN6Q8TEA1 469 aaKnown RBP9.35□□□□□ -0.91
GTF3A-206ENST00000470606 LARP4BQ92615 738 aaKnown RBP9.35□□□□□ -0.91
GTF3A-206ENST00000470606 RAD54LQ92698 747 aa9.35□□□□□ -0.91
GTF3A-206ENST00000470606 HPS3Q969F9 1004 aa9.35□□□□□ -0.91
GTF3A-206ENST00000470606 CALML4Q96GE6 196 aa9.35□□□□□ -0.91
GTF3A-206ENST00000470606 GSDMAQ96QA5 445 aa9.35□□□□□ -0.91
GTF3A-206ENST00000470606 EIF2AK1Q9BQI3 630 aaKnown RBP9.35□□□□□ -0.91
GTF3A-206ENST00000470606 EHMT1Q9H9B1 1298 aa9.35□□□□□ -0.91
GTF3A-206ENST00000470606 EFCC1Q9HA90 598 aa9.35□□□□□ -0.91
GTF3A-206ENST00000470606 PLXNA1Q9UIW2 1896 aa9.35□□□□□ -0.91
GTF3A-206ENST00000470606 PLXNB2O15031 1838 aa9.34□□□□□ -0.91
GTF3A-206ENST00000470606 TESPA1A2RU30 521 aaPredicted RBP9.34□□□□□ -0.91
GTF3A-206ENST00000470606 PPP1R3GB7ZBB8 358 aa9.34□□□□□ -0.91
GTF3A-206ENST00000470606 GAS7O60861 476 aa9.34□□□□□ -0.91
GTF3A-206ENST00000470606 SLITRK3O94933 977 aa9.34□□□□□ -0.91
GTF3A-206ENST00000470606 CCNE2O96020 404 aa9.34□□□□□ -0.91
GTF3A-206ENST00000470606 RPA1P27694 616 aa9.34□□□□□ -0.91
GTF3A-206ENST00000470606 SP2Q02086 613 aa9.34□□□□□ -0.91
GTF3A-206ENST00000470606 CTTNQ14247 550 aaKnown RBP9.34□□□□□ -0.91
GTF3A-206ENST00000470606 ARSHQ5FYA8 562 aa9.34□□□□□ -0.91
GTF3A-206ENST00000470606 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.34□□□□□ -0.91
GTF3A-206ENST00000470606 AOPEPQ8N6M6 819 aa9.34□□□□□ -0.91
GTF3A-206ENST00000470606 DNAJC19Q96DA6 116 aa9.34□□□□□ -0.91
GTF3A-206ENST00000470606 PDLIM2Q96JY6 352 aa9.34□□□□□ -0.91
GTF3A-206ENST00000470606 RIT2Q99578 217 aa9.34□□□□□ -0.91
GTF3A-206ENST00000470606 C7orf25Q9BPX7 421 aa9.34□□□□□ -0.91
GTF3A-206ENST00000470606 PYM1Q9BRP8 204 aaKnown RBP9.34□□□□□ -0.91
GTF3A-206ENST00000470606 STK17AQ9UEE5 414 aa9.34□□□□□ -0.91
GTF3A-206ENST00000470606 GDAQ9Y2T3 454 aa9.34□□□□□ -0.91
GTF3A-206ENST00000470606 SLC45A1Q9Y2W3 748 aa9.34□□□□□ -0.91
GTF3A-206ENST00000470606 NPHP3-ACAD11A0A0J9YXS1 232 aa9.33□□□□□ -0.92
GTF3A-206ENST00000470606 DCAF8L1A6NGE4 600 aa9.33□□□□□ -0.92
GTF3A-206ENST00000470606 COBLO75128 1261 aa9.33□□□□□ -0.92
GTF3A-206ENST00000470606 RPN1P04843 607 aaKnown RBP9.33□□□□□ -0.92
GTF3A-206ENST00000470606 KCNA2P16389 499 aa9.33□□□□□ -0.92
GTF3A-206ENST00000470606 EDNRBP24530 442 aa9.33□□□□□ -0.92
GTF3A-206ENST00000470606 ALDH5A1P51649 535 aaPredicted RBP9.33□□□□□ -0.92
GTF3A-206ENST00000470606 ZNF157P51786 506 aaPredicted RBP9.33□□□□□ -0.92
GTF3A-206ENST00000470606 SLC12A3P55017 1021 aa9.33□□□□□ -0.92
GTF3A-206ENST00000470606 PABPC4Q13310 644 aaKnown RBP eCLIP9.33□□□□□ -0.923e-8■■■■□ 24.1
GTF3A-206ENST00000470606 UVSSAQ2YD98 709 aa9.33□□□□□ -0.92
GTF3A-206ENST00000470606 KMT5BQ4FZB7 885 aa9.33□□□□□ -0.92
GTF3A-206ENST00000470606 DYDC2Q96IM9 177 aa9.33□□□□□ -0.92
GTF3A-206ENST00000470606 BPIFA3Q9BQP9 254 aa9.33□□□□□ -0.92
GTF3A-206ENST00000470606 CUEDC2Q9H467 287 aa9.33□□□□□ -0.92
GTF3A-206ENST00000470606 GPBP1L1Q9HC44 474 aaPredicted RBP9.33□□□□□ -0.92
GTF3A-206ENST00000470606 HOOK1Q9UJC3 728 aaKnown RBP9.33□□□□□ -0.92
GTF3A-206ENST00000470606 SMC2O95347 1197 aa9.33□□□□□ -0.92
GTF3A-206ENST00000470606 FCER1AP12319 257 aa9.33□□□□□ -0.92
GTF3A-206ENST00000470606 CCND2P30279 289 aa9.33□□□□□ -0.92
GTF3A-206ENST00000470606 EHHADHQ08426 723 aa9.33□□□□□ -0.92
GTF3A-206ENST00000470606 UGCGQ16739 394 aa9.33□□□□□ -0.92
GTF3A-206ENST00000470606 DYMQ7RTS9 669 aa9.33□□□□□ -0.92
GTF3A-206ENST00000470606 TRMT44Q8IYL2 757 aaKnown RBP9.33□□□□□ -0.92
GTF3A-206ENST00000470606 TRIML1Q8N9V2 468 aa9.33□□□□□ -0.92
GTF3A-206ENST00000470606 GLIS3Q8NEA6 775 aa9.33□□□□□ -0.92
GTF3A-206ENST00000470606 DNERQ8NFT8 737 aa9.33□□□□□ -0.92
GTF3A-206ENST00000470606 SMCR8Q8TEV9 937 aaPredicted RBP9.33□□□□□ -0.92
GTF3A-206ENST00000470606 DDX12PQ92771 950 aa9.33□□□□□ -0.92
GTF3A-206ENST00000470606 POLR3CQ9BUI4 534 aaPredicted RBP9.33□□□□□ -0.92
GTF3A-206ENST00000470606 POLD4Q9HCU8 107 aa9.33□□□□□ -0.92
GTF3A-206ENST00000470606 MORF4L1Q9UBU8 362 aa9.33□□□□□ -0.92
GTF3A-206ENST00000470606 FBXO40Q9UH90 709 aa9.33□□□□□ -0.92
GTF3A-206ENST00000470606 MYH9P35579 1960 aaKnown RBP9.33□□□□□ -0.92
GTF3A-206ENST00000470606 PFASO15067 1338 aa9.32□□□□□ -0.92
GTF3A-206ENST00000470606 ADGRA2Q96PE1 1338 aa9.32□□□□□ -0.92
GTF3A-206ENST00000470606 SPATA31C2B4DYI2 1134 aa9.32□□□□□ -0.92
GTF3A-206ENST00000470606 POTEB2H3BUK9 544 aa9.32□□□□□ -0.92
GTF3A-206ENST00000470606 RHOBTB3O94955 611 aa9.32□□□□□ -0.92
GTF3A-206ENST00000470606 CAVIN2O95810 425 aa9.32□□□□□ -0.92
GTF3A-206ENST00000470606 SLC25A27O95847 323 aa9.32□□□□□ -0.92
GTF3A-206ENST00000470606 PLA2G4BP0C869 781 aa9.32□□□□□ -0.92
GTF3A-206ENST00000470606 ATP1A3P13637 1013 aa9.32□□□□□ -0.92
GTF3A-206ENST00000470606 CYP11B2P19099 503 aa9.32□□□□□ -0.92
GTF3A-206ENST00000470606 PTGS1P23219 599 aa9.32□□□□□ -0.92
GTF3A-206ENST00000470606 CACNB1Q02641 598 aaPredicted RBP9.32□□□□□ -0.92
GTF3A-206ENST00000470606 STK4Q13043 487 aa9.32□□□□□ -0.92
GTF3A-206ENST00000470606 TMEM63BQ5T3F8 832 aa9.32□□□□□ -0.92
GTF3A-206ENST00000470606 RGMBQ6NW40 437 aa9.32□□□□□ -0.92
GTF3A-206ENST00000470606 XRRA1Q6P2D8 792 aa9.32□□□□□ -0.92
GTF3A-206ENST00000470606 SV2BQ7L1I2 683 aa9.32□□□□□ -0.92
GTF3A-206ENST00000470606 KIAA0895Q8NCT3 520 aa9.32□□□□□ -0.92
GTF3A-206ENST00000470606 BANK1Q8NDB2 785 aa9.32□□□□□ -0.92
GTF3A-206ENST00000470606 GPRC5AQ8NFJ5 357 aa9.32□□□□□ -0.92
GTF3A-206ENST00000470606 PIGOQ8TEQ8 1089 aa9.32□□□□□ -0.92
GTF3A-206ENST00000470606 CDK5RAP3Q96JB5 506 aa9.32□□□□□ -0.92
GTF3A-206ENST00000470606 PPP1R9BQ96SB3 815 aa9.32□□□□□ -0.92
GTF3A-206ENST00000470606 TEKT3Q9BXF9 490 aa9.32□□□□□ -0.92
GTF3A-206ENST00000470606 FGFBP2Q9BYJ0 223 aa9.32□□□□□ -0.92
GTF3A-206ENST00000470606 MAF1Q9H063 256 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms