RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 CLSTN1O94985 981 aa15.07■□□□□ 0
BRCA1-209ENST00000470026 ATP2B2Q01814 1243 aa15.07■□□□□ 0
BRCA1-209ENST00000470026 RASSF7Q02833 373 aa15.07■□□□□ 0
BRCA1-209ENST00000470026 SFMBT2Q5VUG0 894 aa15.07■□□□□ 0
BRCA1-209ENST00000470026 EMBQ6PCB8 327 aa15.07■□□□□ 0
BRCA1-209ENST00000470026 MOXD1Q6UVY6 613 aa15.07■□□□□ 0
BRCA1-209ENST00000470026 TMC4Q7Z404 712 aa15.07■□□□□ 0
BRCA1-209ENST00000470026 CCDC65Q8IXS2 484 aa15.07■□□□□ 0
BRCA1-209ENST00000470026 RIN2Q8WYP3 895 aaPredicted RBP15.07■□□□□ 0
BRCA1-209ENST00000470026 CAVIN3Q969G5 261 aa15.07■□□□□ 0
BRCA1-209ENST00000470026 C8orf37Q96NL8 207 aa15.07■□□□□ 0
BRCA1-209ENST00000470026 COA1Q9GZY4 146 aa15.07■□□□□ 0
BRCA1-209ENST00000470026 PSTPIP2Q9H939 334 aa15.07■□□□□ 0
BRCA1-209ENST00000470026 BMP2KQ9NSY1 1161 aaPredicted RBP15.07■□□□□ 0
BRCA1-209ENST00000470026 AIPL1Q9NZN9 384 aa15.07■□□□□ 0
BRCA1-209ENST00000470026 ATP6V0A2Q9Y487 856 aa15.07■□□□□ 0
BRCA1-209ENST00000470026 PITPNM2Q9BZ72 1349 aa15.07■□□□□ 0
BRCA1-209ENST00000470026 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.07■□□□□ 0
BRCA1-209ENST00000470026 CYP11B2P19099 503 aa15.07■□□□□ 0
BRCA1-209ENST00000470026 USP11P51784 963 aa15.07■□□□□ 0
BRCA1-209ENST00000470026 GTF2IP78347 998 aa15.07■□□□□ 0
BRCA1-209ENST00000470026 NAB2Q15742 525 aa15.07■□□□□ 0
BRCA1-209ENST00000470026 EDRF1Q3B7T1 1238 aa15.07■□□□□ 0
BRCA1-209ENST00000470026 PPP4R3CPQ6ZMV5 832 aa15.07■□□□□ 0
BRCA1-209ENST00000470026 SCFD1Q8WVM8 642 aa15.07■□□□□ 0
BRCA1-209ENST00000470026 LRRC4BQ9NT99 713 aa15.07■□□□□ 0
BRCA1-209ENST00000470026 STIM2Q9P246 746 aa15.07■□□□□ 0
BRCA1-209ENST00000470026 PCDHGC5Q9Y5F6 944 aa15.07■□□□□ 0
BRCA1-209ENST00000470026 GOLGA6BA6NDN3 693 aa15.06■□□□□ 0
BRCA1-209ENST00000470026 USP17L10C9JJH3 530 aa15.06■□□□□ 0
BRCA1-209ENST00000470026 MYO1CO00159 1063 aa15.06■□□□□ 0
BRCA1-209ENST00000470026 PLA2G4BP0C869 781 aa15.06■□□□□ 0
BRCA1-209ENST00000470026 PAFAH1B1P43034 410 aa15.06■□□□□ 0
BRCA1-209ENST00000470026 EPHB4P54760 987 aa15.06■□□□□ 0
BRCA1-209ENST00000470026 EIF6P56537 245 aaKnown RBP15.06■□□□□ 0
BRCA1-209ENST00000470026 NNTQ13423 1086 aa15.06■□□□□ 0
BRCA1-209ENST00000470026 PICALMQ13492 652 aa15.06■□□□□ 0
BRCA1-209ENST00000470026 SLC18A3Q16572 532 aa15.06■□□□□ 0
BRCA1-209ENST00000470026 CCDC40Q4G0X9 1142 aa15.06■□□□□ 0
BRCA1-209ENST00000470026 DPY19L2P1Q6NXN4 242 aa15.06■□□□□ 0
BRCA1-209ENST00000470026 CERS5Q8N5B7 392 aa15.06■□□□□ 0
BRCA1-209ENST00000470026 GOLGA6L1Q8N7Z2 621 aa15.06■□□□□ 0
BRCA1-209ENST00000470026 CRYGNQ8WXF5 182 aa15.06■□□□□ 0
BRCA1-209ENST00000470026 ZBTB9Q96C00 473 aa15.06■□□□□ 0
BRCA1-209ENST00000470026 DRC1Q96MC2 740 aa15.06■□□□□ 0
BRCA1-209ENST00000470026 TANGO6Q9C0B7 1094 aa15.06■□□□□ 0
BRCA1-209ENST00000470026 GANQ9H2C0 597 aa15.06■□□□□ 0
BRCA1-209ENST00000470026 LCMT1Q9UIC8 334 aa15.06■□□□□ 0
BRCA1-209ENST00000470026 BTNL10A8MVZ5 291 aa15.05■□□□□ 0
BRCA1-209ENST00000470026 NCK2O43639 380 aa15.05■□□□□ 0
BRCA1-209ENST00000470026 EPB41P11171 864 aaKnown RBP15.05■□□□□ 0
BRCA1-209ENST00000470026 FOXR1Q6PIV2 292 aa15.05■□□□□ 0
BRCA1-209ENST00000470026 SND1Q7KZF4 910 aaKnown RBP eCLIP15.05■□□□□ 0
BRCA1-209ENST00000470026 SP8Q8IXZ3 490 aa15.05■□□□□ 0
BRCA1-209ENST00000470026 GDAP1L1Q96MZ0 367 aa15.05■□□□□ 0
BRCA1-209ENST00000470026 LSM14BQ9BX40 385 aaKnown RBP15.05■□□□□ 0
BRCA1-209ENST00000470026 EHD4Q9H223 541 aa15.05■□□□□ 0
BRCA1-209ENST00000470026 TMEM51Q9NW97 253 aa15.05■□□□□ 0
BRCA1-209ENST00000470026 RRP15Q9Y3B9 282 aaKnown RBP15.05■□□□□ 0
BRCA1-209ENST00000470026 KIF13BQ9NQT8 1826 aa15.05■□□□□ 0
BRCA1-209ENST00000470026 E9PMD0 336 aa15.05■□□□□ -0
BRCA1-209ENST00000470026 SLC12A3P55017 1021 aa15.05■□□□□ -0
BRCA1-209ENST00000470026 POLR2FP61218 127 aaKnown RBP15.05■□□□□ -0
BRCA1-209ENST00000470026 SF3B2Q13435 895 aaKnown RBP15.05■□□□□ -0
BRCA1-209ENST00000470026 CCDC181Q5TID7 509 aa15.05■□□□□ -0
BRCA1-209ENST00000470026 ANKRD13CQ8N6S4 541 aa15.05■□□□□ -0
BRCA1-209ENST00000470026 GJA10Q969M2 543 aa15.05■□□□□ -0
BRCA1-209ENST00000470026 NLRC4Q9NPP4 1024 aa15.05■□□□□ -0
BRCA1-209ENST00000470026 LUC7LQ9NQ29 371 aaKnown RBP15.05■□□□□ -0
BRCA1-209ENST00000470026 GDF3Q9NR23 364 aa15.05■□□□□ -0
BRCA1-209ENST00000470026 RBM12Q9NTZ6 932 aaKnown RBP15.05■□□□□ -0
BRCA1-209ENST00000470026 KIAA1024Q9UPX6 916 aa15.05■□□□□ -0
BRCA1-209ENST00000470026 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.05■□□□□ -0
BRCA1-209ENST00000470026 A0A0U1RQG5 324 aaPredicted RBP15.04■□□□□ -0
BRCA1-209ENST00000470026 GRID2IPA4D2P6 1211 aa15.04■□□□□ -0
BRCA1-209ENST00000470026 C6orf229H3BNL8 230 aa15.04■□□□□ -0
BRCA1-209ENST00000470026 PPFIA4O75335 1185 aa15.04■□□□□ -0
BRCA1-209ENST00000470026 CXCR5P32302 372 aa15.04■□□□□ -0
BRCA1-209ENST00000470026 SLC16A2P36021 539 aa15.04■□□□□ -0
BRCA1-209ENST00000470026 CFAP221Q4G0U5 840 aa15.04■□□□□ -0
BRCA1-209ENST00000470026 TDRD12Q587J7 1177 aaKnown RBP15.04■□□□□ -0
BRCA1-209ENST00000470026 ARSHQ5FYA8 562 aa15.04■□□□□ -0
BRCA1-209ENST00000470026 FAM182BQ5T319 152 aa15.04■□□□□ -0
BRCA1-209ENST00000470026 ALS2CLQ60I27 953 aa15.04■□□□□ -0
BRCA1-209ENST00000470026 MKL1Q969V6 931 aa15.04■□□□□ -0
BRCA1-209ENST00000470026 CCDC17Q96LX7 622 aa15.04■□□□□ -0
BRCA1-209ENST00000470026 EMILIN3Q9NT22 766 aa15.04■□□□□ -0
BRCA1-209ENST00000470026 SMARCAL1Q9NZC9 954 aa15.04■□□□□ -0
BRCA1-209ENST00000470026 EHD2Q9NZN4 543 aa15.04■□□□□ -0
BRCA1-209ENST00000470026 POTEB3A0JP26 581 aa15.04■□□□□ -0
BRCA1-209ENST00000470026 POTECB2RU33 542 aa15.04■□□□□ -0
BRCA1-209ENST00000470026 GOLGA8KD6RF30 607 aa15.04■□□□□ -0
BRCA1-209ENST00000470026 SPIRE1Q08AE8 756 aa15.04■□□□□ -0
BRCA1-209ENST00000470026 MEI1Q5TIA1 1274 aa15.04■□□□□ -0
BRCA1-209ENST00000470026 POTEBQ6S5H4 581 aa15.04■□□□□ -0
BRCA1-209ENST00000470026 HHIPL2Q6UWX4 724 aa15.04■□□□□ -0
BRCA1-209ENST00000470026 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.04■□□□□ -0
BRCA1-209ENST00000470026 GPBP1Q86WP2 473 aa15.04■□□□□ -0
BRCA1-209ENST00000470026 FAM76AQ8TAV0 307 aa15.04■□□□□ -0
BRCA1-209ENST00000470026 USP40Q9NVE5 1235 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms