RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 AK8Q96MA6 479 aa9.23□□□□□ -0.93
NPHP3-204ENST00000469232 PURBQ96QR8 312 aaKnown RBP9.23□□□□□ -0.93
NPHP3-204ENST00000469232 MMP19Q99542 508 aa9.23□□□□□ -0.93
NPHP3-204ENST00000469232 CCSER1Q9C0I3 900 aa9.23□□□□□ -0.93
NPHP3-204ENST00000469232 SAGE1Q9NXZ1 904 aa9.23□□□□□ -0.93
NPHP3-204ENST00000469232 GJD2Q9UKL4 321 aa9.23□□□□□ -0.93
NPHP3-204ENST00000469232 MSH4O15457 936 aa9.23□□□□□ -0.93
NPHP3-204ENST00000469232 DHX15O43143 795 aaKnown RBP9.23□□□□□ -0.93
NPHP3-204ENST00000469232 COBLO75128 1261 aa9.23□□□□□ -0.93
NPHP3-204ENST00000469232 EIF3JO75822 258 aaKnown RBP9.23□□□□□ -0.93
NPHP3-204ENST00000469232 ATP2B1P20020 1258 aa9.23□□□□□ -0.93
NPHP3-204ENST00000469232 PSEN2P49810 448 aa9.23□□□□□ -0.93
NPHP3-204ENST00000469232 SEMA3FQ13275 785 aa9.23□□□□□ -0.93
NPHP3-204ENST00000469232 SNW1Q13573 536 aaKnown RBP9.23□□□□□ -0.93
NPHP3-204ENST00000469232 KCTD2Q14681 263 aa9.23□□□□□ -0.93
NPHP3-204ENST00000469232 CALCRLQ16602 461 aa9.23□□□□□ -0.93
NPHP3-204ENST00000469232 ELOA2Q8IYF1 753 aaPredicted RBP9.23□□□□□ -0.93
NPHP3-204ENST00000469232 SLFN12Q8IYM2 578 aa9.23□□□□□ -0.93
NPHP3-204ENST00000469232 FMR1NBQ8N0W7 255 aaPredicted RBP9.23□□□□□ -0.93
NPHP3-204ENST00000469232 MRPS27Q92552 414 aaKnown RBP9.23□□□□□ -0.93
NPHP3-204ENST00000469232 RIT2Q99578 217 aa9.23□□□□□ -0.93
NPHP3-204ENST00000469232 CPA4Q9UI42 421 aa9.23□□□□□ -0.93
NPHP3-204ENST00000469232 VAV3Q9UKW4 847 aa9.23□□□□□ -0.93
NPHP3-204ENST00000469232 PLXNA1Q9UIW2 1896 aa9.22□□□□□ -0.93
NPHP3-204ENST00000469232 RBM47A0AV96 593 aaKnown RBP9.22□□□□□ -0.93
NPHP3-204ENST00000469232 B4DLN1 442 aa9.22□□□□□ -0.93
NPHP3-204ENST00000469232 SPATA31C2B4DYI2 1134 aa9.22□□□□□ -0.93
NPHP3-204ENST00000469232 DPYSL4O14531 572 aa9.22□□□□□ -0.93
NPHP3-204ENST00000469232 ARP10275 920 aa9.22□□□□□ -0.93
NPHP3-204ENST00000469232 HSPA6P17066 643 aa9.22□□□□□ -0.93
NPHP3-204ENST00000469232 EIF2AK2P19525 551 aaKnown RBP9.22□□□□□ -0.93
NPHP3-204ENST00000469232 ADORA2AP29274 412 aa9.22□□□□□ -0.93
NPHP3-204ENST00000469232 PPP2R5CQ13362 524 aa9.22□□□□□ -0.93
NPHP3-204ENST00000469232 HYIQ5T013 277 aa9.22□□□□□ -0.93
NPHP3-204ENST00000469232 ARHGEF16Q5VV41 709 aa9.22□□□□□ -0.93
NPHP3-204ENST00000469232 DTHD1Q6ZMT9 781 aa9.22□□□□□ -0.93
NPHP3-204ENST00000469232 PLA2G4DQ86XP0 818 aa9.22□□□□□ -0.93
NPHP3-204ENST00000469232 TIGD1Q96MW7 591 aa9.22□□□□□ -0.93
NPHP3-204ENST00000469232 CLIC6Q96NY7 704 aa9.22□□□□□ -0.93
NPHP3-204ENST00000469232 SENP7Q9BQF6 1050 aa9.22□□□□□ -0.93
NPHP3-204ENST00000469232 MMTAG2Q9BU76 263 aaKnown RBP9.22□□□□□ -0.93
NPHP3-204ENST00000469232 KATNBL1Q9H079 304 aa9.22□□□□□ -0.93
NPHP3-204ENST00000469232 CSRNP2Q9H175 543 aa9.22□□□□□ -0.93
NPHP3-204ENST00000469232 GOLPH3LQ9H4A5 285 aa9.22□□□□□ -0.93
NPHP3-204ENST00000469232 AGO4Q9HCK5 861 aaKnown RBP9.22□□□□□ -0.93
NPHP3-204ENST00000469232 KCNH7Q9NS40 1196 aa9.22□□□□□ -0.93
NPHP3-204ENST00000469232 MGAMO43451 1857 aa9.21□□□□□ -0.93
NPHP3-204ENST00000469232 ASB14A6NK59 587 aa9.21□□□□□ -0.93
NPHP3-204ENST00000469232 TRAK2O60296 914 aa9.21□□□□□ -0.93
NPHP3-204ENST00000469232 TGFB3P10600 412 aa9.21□□□□□ -0.93
NPHP3-204ENST00000469232 LIG1P18858 919 aa9.21□□□□□ -0.93
NPHP3-204ENST00000469232 CTGFP29279 349 aa9.21□□□□□ -0.93
NPHP3-204ENST00000469232 FAM160A1Q05DH4 1040 aa9.21□□□□□ -0.93
NPHP3-204ENST00000469232 MAP2K5Q13163 448 aa9.21□□□□□ -0.93
NPHP3-204ENST00000469232 STXBP2Q15833 593 aa9.21□□□□□ -0.93
NPHP3-204ENST00000469232 PRR16Q569H4 304 aa9.21□□□□□ -0.93
NPHP3-204ENST00000469232 RBM43Q6ZSC3 357 aaKnown RBP9.21□□□□□ -0.93
NPHP3-204ENST00000469232 USP49Q70CQ1 688 aa9.21□□□□□ -0.93
NPHP3-204ENST00000469232 OTOP1Q7RTM1 612 aa9.21□□□□□ -0.93
NPHP3-204ENST00000469232 CCAR1Q8IX12 1150 aaKnown RBP9.21□□□□□ -0.93
NPHP3-204ENST00000469232 KCTD17Q8N5Z5 321 aa9.21□□□□□ -0.93
NPHP3-204ENST00000469232 CDHR1Q96JP9 859 aa9.21□□□□□ -0.93
NPHP3-204ENST00000469232 RNF186Q9NXI6 227 aa9.21□□□□□ -0.93
NPHP3-204ENST00000469232 NFASCO94856 1347 aa9.21□□□□□ -0.93
NPHP3-204ENST00000469232 SYNGAP1Q96PV0 1343 aa9.21□□□□□ -0.93
NPHP3-204ENST00000469232 VWA3AA6NCI4 1184 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 IPO5O00410 1097 aaKnown RBP9.2□□□□□ -0.94
NPHP3-204ENST00000469232 XRCC5P13010 732 aaKnown RBP9.2□□□□□ -0.94
NPHP3-204ENST00000469232 KCNA2P16389 499 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 MUTP22033 750 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 C1QTNF8P60827 252 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 UBXN2AP68543 259 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 LACTBP83111 547 aaPredicted RBP9.2□□□□□ -0.94
NPHP3-204ENST00000469232 ITGB3BPQ13352 177 aaPredicted RBP9.2□□□□□ -0.94
NPHP3-204ENST00000469232 E2F4Q16254 413 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 KIAA1217Q5T5P2 1943 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 DMRTA1Q5VZB9 504 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 OLFML2BQ68BL8 750 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 CCDC62Q6P9F0 684 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 DOCK3Q8IZD9 2030 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 FSIP1Q8NA03 581 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 RDM1Q8NG50 284 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 SOCS4Q8WXH5 440 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 MAML3Q96JK9 1138 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 WDR11Q9BZH6 1224 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 TTC12Q9H892 705 aaPredicted RBP9.2□□□□□ -0.94
NPHP3-204ENST00000469232 TBC1D22BQ9NU19 505 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 DDX19AQ9NUU7 478 aaKnown RBP9.2□□□□□ -0.94
NPHP3-204ENST00000469232 USP25Q9UHP3 1055 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 PCDHA12Q9UN75 941 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 IVNS1ABPQ9Y6Y0 642 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 PGK2P07205 417 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 PFKFB1P16118 471 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 ZNF76P36508 570 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 NDUFA8P51970 172 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 MTMR1Q13613 665 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 KCNV1Q6PIU1 500 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 SH3RF1Q7Z6J0 888 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 NLRX1Q86UT6 975 aa9.2□□□□□ -0.94
NPHP3-204ENST00000469232 DNAJC5GQ8N7S2 189 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms