RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 NINJ1Q92982 152 aa7.3□□□□□ -1.24
LSM5-209ENST00000468872 ZBTB8AQ96BR9 441 aa7.3□□□□□ -1.24
LSM5-209ENST00000468872 SPATA6Q9NWH7 488 aaPredicted RBP7.3□□□□□ -1.24
LSM5-209ENST00000468872 PALD1Q9ULE6 856 aa7.3□□□□□ -1.24
LSM5-209ENST00000468872 PLAAQ9Y263 795 aa7.3□□□□□ -1.24
LSM5-209ENST00000468872 X6R8D5 127 aa7.3□□□□□ -1.24
LSM5-209ENST00000468872 BLACEA4D250 179 aa7.29□□□□□ -1.24
LSM5-209ENST00000468872 MYO1BO43795 1136 aa7.29□□□□□ -1.24
LSM5-209ENST00000468872 DNAJC6O75061 913 aa7.29□□□□□ -1.24
LSM5-209ENST00000468872 MASP1P48740 699 aa7.29□□□□□ -1.24
LSM5-209ENST00000468872 GTF2A2P52657 109 aa7.29□□□□□ -1.24
LSM5-209ENST00000468872 PTPROQ16827 1216 aa7.29□□□□□ -1.24
LSM5-209ENST00000468872 SKOR2Q2VWA4 1001 aaPredicted RBP7.29□□□□□ -1.24
LSM5-209ENST00000468872 FNDC3BQ53EP0 1204 aaKnown RBP7.29□□□□□ -1.24
LSM5-209ENST00000468872 SLC35F1Q5T1Q4 408 aa7.29□□□□□ -1.24
LSM5-209ENST00000468872 NT5DC1Q5TFE4 455 aa7.29□□□□□ -1.24
LSM5-209ENST00000468872 PPIL6Q8IXY8 311 aa7.29□□□□□ -1.24
LSM5-209ENST00000468872 LINC00482Q8N8I6 264 aa7.29□□□□□ -1.24
LSM5-209ENST00000468872 RCBTB1Q8NDN9 531 aa7.29□□□□□ -1.24
LSM5-209ENST00000468872 TRMT2BQ96GJ1 504 aaKnown RBP7.29□□□□□ -1.24
LSM5-209ENST00000468872 MRPL4Q9BYD3 311 aaKnown RBP7.29□□□□□ -1.24
LSM5-209ENST00000468872 SPC25Q9HBM1 224 aa7.29□□□□□ -1.24
LSM5-209ENST00000468872 FBXL7Q9UJT9 491 aa7.29□□□□□ -1.24
LSM5-209ENST00000468872 LTBRP36941 435 aa7.28□□□□□ -1.24
LSM5-209ENST00000468872 SMAD4Q13485 552 aaKnown RBP7.28□□□□□ -1.24
LSM5-209ENST00000468872 TM4SF20Q53R12 229 aa7.28□□□□□ -1.24
LSM5-209ENST00000468872 TAF7LQ5H9L4 462 aa7.28□□□□□ -1.24
LSM5-209ENST00000468872 ERICH6BQ5W0A0 696 aa7.28□□□□□ -1.24
LSM5-209ENST00000468872 DENND5AQ6IQ26 1287 aa7.28□□□□□ -1.24
LSM5-209ENST00000468872 MILR1Q7Z6M3 343 aa7.28□□□□□ -1.24
LSM5-209ENST00000468872 DHX37Q8IY37 1157 aaKnown RBP7.28□□□□□ -1.24
LSM5-209ENST00000468872 NIM1KQ8IY84 436 aa7.28□□□□□ -1.24
LSM5-209ENST00000468872 FAM26EQ8N5C1 309 aa7.28□□□□□ -1.24
LSM5-209ENST00000468872 TMEM169Q96HH4 297 aa7.28□□□□□ -1.24
LSM5-209ENST00000468872 GORASP1Q9BQQ3 440 aa7.28□□□□□ -1.24
LSM5-209ENST00000468872 KRTAP4-2Q9BYR5 136 aa7.28□□□□□ -1.24
LSM5-209ENST00000468872 USP40Q9NVE5 1235 aa7.28□□□□□ -1.24
LSM5-209ENST00000468872 NTMQ9P121 344 aa7.28□□□□□ -1.24
LSM5-209ENST00000468872 PRICKLE3O43900 615 aaPredicted RBP7.27□□□□□ -1.25
LSM5-209ENST00000468872 CELA3BP08861 270 aa7.27□□□□□ -1.25
LSM5-209ENST00000468872 LCP1P13796 627 aa7.27□□□□□ -1.25
LSM5-209ENST00000468872 HSP90B1P14625 803 aaKnown RBP7.27□□□□□ -1.25
LSM5-209ENST00000468872 TRIM61Q5EBN2 209 aa7.27□□□□□ -1.25
LSM5-209ENST00000468872 SLC7A14Q8TBB6 771 aa7.27□□□□□ -1.25
LSM5-209ENST00000468872 MFSD3Q96ES6 412 aa7.27□□□□□ -1.25
LSM5-209ENST00000468872 SYT3Q9BQG1 590 aa7.27□□□□□ -1.25
LSM5-209ENST00000468872 C11orf84Q9BUA3 381 aaPredicted RBP7.27□□□□□ -1.25
LSM5-209ENST00000468872 KRTAP9-3Q9BYQ3 159 aa7.27□□□□□ -1.25
LSM5-209ENST00000468872 SLC52A2Q9HAB3 445 aa7.27□□□□□ -1.25
LSM5-209ENST00000468872 PCDHA2Q9Y5H9 948 aa7.27□□□□□ -1.25
LSM5-209ENST00000468872 PPM1GO15355 546 aaPredicted RBP7.26□□□□□ -1.25
LSM5-209ENST00000468872 NOBOXO60393 691 aa7.26□□□□□ -1.25
LSM5-209ENST00000468872 SDSP20132 328 aa7.26□□□□□ -1.25
LSM5-209ENST00000468872 SARSP49591 514 aaKnown RBP7.26□□□□□ -1.25
LSM5-209ENST00000468872 RTP5Q14D33 572 aa7.26□□□□□ -1.25
LSM5-209ENST00000468872 ZFYVE27Q5T4F4 411 aa7.26□□□□□ -1.25
LSM5-209ENST00000468872 LCE5AQ5TCM9 118 aa7.26□□□□□ -1.25
LSM5-209ENST00000468872 CD300LDQ6UXZ3 194 aa7.26□□□□□ -1.25
LSM5-209ENST00000468872 TTLL7Q6ZT98 887 aa7.26□□□□□ -1.25
LSM5-209ENST00000468872 FAM126BQ8IXS8 530 aa7.26□□□□□ -1.25
LSM5-209ENST00000468872 PCDH18Q9HCL0 1135 aa7.26□□□□□ -1.25
LSM5-209ENST00000468872 NDOR1Q9UHB4 597 aa7.26□□□□□ -1.25
LSM5-209ENST00000468872 SFMBT1Q9UHJ3 866 aa7.26□□□□□ -1.25
LSM5-209ENST00000468872 COA3Q9Y2R0 106 aaPredicted RBP7.26□□□□□ -1.25
LSM5-209ENST00000468872 COL4A3BPQ9Y5P4 624 aa7.26□□□□□ -1.25
LSM5-209ENST00000468872 H7BY64 318 aa7.25□□□□□ -1.25
LSM5-209ENST00000468872 KCNQ2O43526 872 aa7.25□□□□□ -1.25
LSM5-209ENST00000468872 VIL1P09327 827 aaKnown RBP7.25□□□□□ -1.25
LSM5-209ENST00000468872 GABREP78334 506 aa7.25□□□□□ -1.25
LSM5-209ENST00000468872 LSAMPQ13449 338 aa7.25□□□□□ -1.25
LSM5-209ENST00000468872 USP53Q70EK8 1073 aa7.25□□□□□ -1.25
LSM5-209ENST00000468872 ZC3H18Q86VM9 953 aaKnown RBP7.25□□□□□ -1.25
LSM5-209ENST00000468872 ZNF761Q86XN6 746 aaPredicted RBP7.25□□□□□ -1.25
LSM5-209ENST00000468872 ANKRD13AQ8IZ07 590 aa7.25□□□□□ -1.25
LSM5-209ENST00000468872 GSTCDQ8NEC7 633 aa7.25□□□□□ -1.25
LSM5-209ENST00000468872 CHAMP1Q96JM3 812 aa7.25□□□□□ -1.25
LSM5-209ENST00000468872 BRINP2Q9C0B6 783 aa7.25□□□□□ -1.25
LSM5-209ENST00000468872 TMX1Q9H3N1 280 aa7.25□□□□□ -1.25
LSM5-209ENST00000468872 TRIM39Q9HCM9 518 aa7.25□□□□□ -1.25
LSM5-209ENST00000468872 NPFFR2Q9Y5X5 522 aa7.25□□□□□ -1.25
LSM5-209ENST00000468872 A0A087X0B3 334 aa7.24□□□□□ -1.25
LSM5-209ENST00000468872 DNAJC8O75937 253 aaPredicted RBP7.24□□□□□ -1.25
LSM5-209ENST00000468872 THBS2P35442 1172 aa7.24□□□□□ -1.25
LSM5-209ENST00000468872 GJA9P57773 515 aa7.24□□□□□ -1.25
LSM5-209ENST00000468872 BRAPQ7Z569 592 aa7.24□□□□□ -1.25
LSM5-209ENST00000468872 THNSL2Q86YJ6 484 aa7.24□□□□□ -1.25
LSM5-209ENST00000468872 KYQ8NBH2 561 aa7.24□□□□□ -1.25
LSM5-209ENST00000468872 PTPRN2Q92932 1015 aa7.24□□□□□ -1.25
LSM5-209ENST00000468872 BDH2Q9BUT1 245 aa7.24□□□□□ -1.25
LSM5-209ENST00000468872 KRTAP4-11Q9BYQ6 195 aa7.24□□□□□ -1.25
LSM5-209ENST00000468872 ZNF652Q9Y2D9 606 aa7.24□□□□□ -1.25
LSM5-209ENST00000468872 TRAF6Q9Y4K3 522 aa7.24□□□□□ -1.25
LSM5-209ENST00000468872 ASXL2Q76L83 1435 aa7.24□□□□□ -1.25
LSM5-209ENST00000468872 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.23□□□□□ -1.25
LSM5-209ENST00000468872 MYCLP1P12525 358 aaPredicted RBP7.23□□□□□ -1.25
LSM5-209ENST00000468872 STAT5AP42229 794 aa7.23□□□□□ -1.25
LSM5-209ENST00000468872 ITGA1P56199 1179 aa7.23□□□□□ -1.25
LSM5-209ENST00000468872 CHRNA2Q15822 529 aa7.23□□□□□ -1.25
LSM5-209ENST00000468872 CR1LQ2VPA4 569 aa7.23□□□□□ -1.25
LSM5-209ENST00000468872 UBXN11Q5T124 520 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms