RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 C11orf84Q9BUA3 381 aaPredicted RBP5.88□□□□□ -1.47
GPNMB-207ENST00000468723 ASH2LQ9UBL3 628 aa5.88□□□□□ -1.47
GPNMB-207ENST00000468723 CDK11AQ9UQ88 783 aaPredicted RBP5.88□□□□□ -1.47
GPNMB-207ENST00000468723 OTOL1A6NHN0 477 aaPredicted RBP5.87□□□□□ -1.47
GPNMB-207ENST00000468723 AQP7O14520 342 aa5.87□□□□□ -1.47
GPNMB-207ENST00000468723 SMARCA5O60264 1052 aaPredicted RBP5.87□□□□□ -1.47
GPNMB-207ENST00000468723 MAFKO60675 156 aa5.87□□□□□ -1.47
GPNMB-207ENST00000468723 SPIRE1Q08AE8 756 aa5.87□□□□□ -1.47
GPNMB-207ENST00000468723 LIPIQ6XZB0 460 aa5.87□□□□□ -1.47
GPNMB-207ENST00000468723 MAMDC2Q7Z304 686 aaPredicted RBP5.87□□□□□ -1.47
GPNMB-207ENST00000468723 PHOSPHO1Q8TCT1 267 aa5.87□□□□□ -1.47
GPNMB-207ENST00000468723 UBXN4Q92575 508 aa5.87□□□□□ -1.47
GPNMB-207ENST00000468723 KISS1RQ969F8 398 aaPredicted RBP5.87□□□□□ -1.47
GPNMB-207ENST00000468723 PUS7Q96PZ0 661 aaKnown RBP5.87□□□□□ -1.47
GPNMB-207ENST00000468723 ZSWIM4Q9H7M6 989 aa5.87□□□□□ -1.47
GPNMB-207ENST00000468723 DTLQ9NZJ0 730 aa5.87□□□□□ -1.47
GPNMB-207ENST00000468723 RBPJLQ9UBG7 517 aa5.87□□□□□ -1.47
GPNMB-207ENST00000468723 NDOR1Q9UHB4 597 aa5.87□□□□□ -1.47
GPNMB-207ENST00000468723 SCRIBQ14160 1630 aa5.87□□□□□ -1.47
GPNMB-207ENST00000468723 CRTAMO95727 393 aa5.86□□□□□ -1.47
GPNMB-207ENST00000468723 LRG1P02750 347 aa5.86□□□□□ -1.47
GPNMB-207ENST00000468723 HMGB1P09429 215 aaKnown RBP5.86□□□□□ -1.47
GPNMB-207ENST00000468723 KCNC1P48547 511 aa5.86□□□□□ -1.47
GPNMB-207ENST00000468723 ITGA1P56199 1179 aa5.86□□□□□ -1.47
GPNMB-207ENST00000468723 GABREP78334 506 aa5.86□□□□□ -1.47
GPNMB-207ENST00000468723 CAP1Q01518 475 aa5.86□□□□□ -1.47
GPNMB-207ENST00000468723 PAK1Q13153 545 aa5.86□□□□□ -1.47
GPNMB-207ENST00000468723 TUSC3Q13454 348 aa5.86□□□□□ -1.47
GPNMB-207ENST00000468723 LONRF2Q1L5Z9 754 aa5.86□□□□□ -1.47
GPNMB-207ENST00000468723 TEPPQ6URK8 271 aa5.86□□□□□ -1.47
GPNMB-207ENST00000468723 TMC5Q6UXY8 1006 aa5.86□□□□□ -1.47
GPNMB-207ENST00000468723 TTLL7Q6ZT98 887 aa5.86□□□□□ -1.47
GPNMB-207ENST00000468723 LINC00482Q8N8I6 264 aa5.86□□□□□ -1.47
GPNMB-207ENST00000468723 KYQ8NBH2 561 aa5.86□□□□□ -1.47
GPNMB-207ENST00000468723 ZSWIM3Q96MP5 696 aa5.86□□□□□ -1.47
GPNMB-207ENST00000468723 CD244Q9BZW8 370 aa5.86□□□□□ -1.47
GPNMB-207ENST00000468723 LNPKQ9C0E8 428 aa5.86□□□□□ -1.47
GPNMB-207ENST00000468723 DSEQ9UL01 958 aa5.86□□□□□ -1.47
GPNMB-207ENST00000468723 SH3D21A4FU49 640 aa5.85□□□□□ -1.47
GPNMB-207ENST00000468723 PYGMP11217 842 aa5.85□□□□□ -1.47
GPNMB-207ENST00000468723 HSP90B1P14625 803 aaKnown RBP5.85□□□□□ -1.47
GPNMB-207ENST00000468723 SARSP49591 514 aaKnown RBP5.85□□□□□ -1.47
GPNMB-207ENST00000468723 CCDC144BQ3MJ40 725 aa5.85□□□□□ -1.47
GPNMB-207ENST00000468723 LCE4AQ5TA78 99 aa5.85□□□□□ -1.47
GPNMB-207ENST00000468723 TRIM48Q8IWZ4 208 aa5.85□□□□□ -1.47
GPNMB-207ENST00000468723 SP8Q8IXZ3 490 aa5.85□□□□□ -1.47
GPNMB-207ENST00000468723 CARFQ8N187 725 aa5.85□□□□□ -1.47
GPNMB-207ENST00000468723 PCDH19Q8TAB3 1148 aa5.85□□□□□ -1.47
GPNMB-207ENST00000468723 UHMK1Q8TAS1 419 aaKnown RBP5.85□□□□□ -1.47
GPNMB-207ENST00000468723 THAP3Q8WTV1 239 aaPredicted RBP5.85□□□□□ -1.47
GPNMB-207ENST00000468723 C20orf173Q96LM9 149 aa5.85□□□□□ -1.47
GPNMB-207ENST00000468723 XYLT2Q9H1B5 865 aa5.85□□□□□ -1.47
GPNMB-207ENST00000468723 SLC52A2Q9HAB3 445 aa5.85□□□□□ -1.47
GPNMB-207ENST00000468723 NGRNQ9NPE2 291 aaKnown RBP5.85□□□□□ -1.47
GPNMB-207ENST00000468723 CATSPERZQ9NTU4 200 aa5.85□□□□□ -1.47
GPNMB-207ENST00000468723 NTMQ9P121 344 aa5.85□□□□□ -1.47
GPNMB-207ENST00000468723 WASF3Q9UPY6 502 aa5.85□□□□□ -1.47
GPNMB-207ENST00000468723 TELO2Q9Y4R8 837 aa5.85□□□□□ -1.47
GPNMB-207ENST00000468723 PTCH2Q9Y6C5 1203 aa5.85□□□□□ -1.47
GPNMB-207ENST00000468723 BICRAQ9NZM4 1560 aa5.84□□□□□ -1.47
GPNMB-207ENST00000468723 A0A0G2JLL6 359 aaPredicted RBP5.84□□□□□ -1.47
GPNMB-207ENST00000468723 TCRBV5S4A2TA0A5A2 114 aa5.84□□□□□ -1.47
GPNMB-207ENST00000468723 KRT15P19012 456 aa5.84□□□□□ -1.47
GPNMB-207ENST00000468723 THBS2P35442 1172 aa5.84□□□□□ -1.47
GPNMB-207ENST00000468723 DNM2P50570 870 aa5.84□□□□□ -1.47
GPNMB-207ENST00000468723 ADAM9Q13443 819 aa5.84□□□□□ -1.47
GPNMB-207ENST00000468723 NFE2L2Q16236 605 aa5.84□□□□□ -1.47
GPNMB-207ENST00000468723 C2orf27AQ580R0 203 aa5.84□□□□□ -1.47
GPNMB-207ENST00000468723 PHF19Q5T6S3 580 aa5.84□□□□□ -1.47
GPNMB-207ENST00000468723 NT5DC1Q5TFE4 455 aa5.84□□□□□ -1.47
GPNMB-207ENST00000468723 CYP4F22Q6NT55 531 aa5.84□□□□□ -1.47
GPNMB-207ENST00000468723 OSTM1Q86WC4 334 aa5.84□□□□□ -1.47
GPNMB-207ENST00000468723 ZC3H7AQ8IWR0 971 aaKnown RBP5.84□□□□□ -1.47
GPNMB-207ENST00000468723 ZSWIM2Q8NEG5 633 aa5.84□□□□□ -1.47
GPNMB-207ENST00000468723 SLC7A14Q8TBB6 771 aa5.84□□□□□ -1.47
GPNMB-207ENST00000468723 FBXW5Q969U6 566 aa5.84□□□□□ -1.47
GPNMB-207ENST00000468723 MRFAP1L1Q96HT8 127 aa5.84□□□□□ -1.47
GPNMB-207ENST00000468723 ADAM7Q9H2U9 754 aa5.84□□□□□ -1.47
GPNMB-207ENST00000468723 PCDH18Q9HCL0 1135 aa5.84□□□□□ -1.47
GPNMB-207ENST00000468723 LUC7LQ9NQ29 371 aaKnown RBP5.84□□□□□ -1.47
GPNMB-207ENST00000468723 CROTQ9UKG9 612 aa5.84□□□□□ -1.47
GPNMB-207ENST00000468723 ZCCHC6Q5VYS8 1495 aaKnown RBP5.83□□□□□ -1.48
GPNMB-207ENST00000468723 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.83□□□□□ -1.48
GPNMB-207ENST00000468723 DDX3XO00571 662 aaKnown RBP eCLIP5.83□□□□□ -1.48
GPNMB-207ENST00000468723 KCNK3O14649 394 aa5.83□□□□□ -1.48
GPNMB-207ENST00000468723 RASGRP1O95267 797 aa5.83□□□□□ -1.48
GPNMB-207ENST00000468723 CTSWP56202 376 aa5.83□□□□□ -1.48
GPNMB-207ENST00000468723 ST5P78524 1137 aa5.83□□□□□ -1.48
GPNMB-207ENST00000468723 PAN2Q504Q3 1202 aaKnown RBP5.83□□□□□ -1.48
GPNMB-207ENST00000468723 ZC3H12BQ5HYM0 836 aaKnown RBP5.83□□□□□ -1.48
GPNMB-207ENST00000468723 HABP4Q5JVS0 413 aaKnown RBP5.83□□□□□ -1.48
GPNMB-207ENST00000468723 LILRA6Q6PI73 481 aa5.83□□□□□ -1.48
GPNMB-207ENST00000468723 ARHGAP36Q6ZRI8 547 aa5.83□□□□□ -1.48
GPNMB-207ENST00000468723 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.83□□□□□ -1.48
GPNMB-207ENST00000468723 TTLL6Q8N841 843 aa5.83□□□□□ -1.48
GPNMB-207ENST00000468723 JMYQ8N9B5 988 aa5.83□□□□□ -1.48
GPNMB-207ENST00000468723 SH3RF2Q8TEC5 729 aa5.83□□□□□ -1.48
GPNMB-207ENST00000468723 KANSL2Q9H9L4 492 aa5.83□□□□□ -1.48
GPNMB-207ENST00000468723 CBLCQ9ULV8 474 aa5.83□□□□□ -1.48
GPNMB-207ENST00000468723 ARVCFO00192 962 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms