RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 LGR5O75473 907 aa19.95■□□□□ 0.78
TRIM56-203ENST00000467847 FAM117BQ6P1L5 589 aa19.95■□□□□ 0.78
TRIM56-203ENST00000467847 GDPD5Q8WTR4 605 aa19.95■□□□□ 0.78
TRIM56-203ENST00000467847 ATP6V0A1Q93050 837 aa19.95■□□□□ 0.78
TRIM56-203ENST00000467847 TUT1Q9H6E5 874 aaKnown RBP19.95■□□□□ 0.78
TRIM56-203ENST00000467847 MTUS1Q9ULD2 1270 aa19.95■□□□□ 0.78
TRIM56-203ENST00000467847 FRMPD4Q14CM0 1322 aa19.95■□□□□ 0.78
TRIM56-203ENST00000467847 SIP14410 1827 aa19.95■□□□□ 0.78
TRIM56-203ENST00000467847 BRWD1Q9NSI6 2320 aa19.94■□□□□ 0.78
TRIM56-203ENST00000467847 RSPH10B2B2RC85 870 aa19.94■□□□□ 0.78
TRIM56-203ENST00000467847 RBAK-RBAKDNI3L0D1 243 aa19.94■□□□□ 0.78
TRIM56-203ENST00000467847 STAM2O75886 525 aa19.94■□□□□ 0.78
TRIM56-203ENST00000467847 LGALS2P05162 132 aa19.94■□□□□ 0.78
TRIM56-203ENST00000467847 RSPH10BP0C881 870 aa19.94■□□□□ 0.78
TRIM56-203ENST00000467847 SMIM10L2AP0DMW4 78 aa19.94■□□□□ 0.78
TRIM56-203ENST00000467847 SMIM10L2BP0DMW5 78 aa19.94■□□□□ 0.78
TRIM56-203ENST00000467847 ANTXR2P58335 489 aa19.94■□□□□ 0.78
TRIM56-203ENST00000467847 MRPS9P82933 396 aaKnown RBP19.94■□□□□ 0.78
TRIM56-203ENST00000467847 IGDCC4Q8TDY8 1250 aa19.94■□□□□ 0.78
TRIM56-203ENST00000467847 EPHX3Q9H6B9 360 aa19.94■□□□□ 0.78
TRIM56-203ENST00000467847 BCAS3Q9H6U6 928 aa19.94■□□□□ 0.78
TRIM56-203ENST00000467847 SPATA31C2B4DYI2 1134 aa19.93■□□□□ 0.78
TRIM56-203ENST00000467847 ICAM3P32942 547 aa19.93■□□□□ 0.78
TRIM56-203ENST00000467847 NEDD9Q14511 834 aa19.93■□□□□ 0.78
TRIM56-203ENST00000467847 METTL7BQ6UX53 244 aa19.93■□□□□ 0.78
TRIM56-203ENST00000467847 CYFIP1Q7L576 1253 aa19.93■□□□□ 0.78
TRIM56-203ENST00000467847 MB21D2Q8IYB1 491 aaPredicted RBP19.93■□□□□ 0.78
TRIM56-203ENST00000467847 CTCFLQ8NI51 663 aaPredicted RBP19.93■□□□□ 0.78
TRIM56-203ENST00000467847 HLA-CQ95604 372 aa19.93■□□□□ 0.78
TRIM56-203ENST00000467847 INPP4AQ96PE3 977 aaPredicted RBP19.93■□□□□ 0.78
TRIM56-203ENST00000467847 TGS1Q96RS0 853 aaKnown RBP19.93■□□□□ 0.78
TRIM56-203ENST00000467847 USP26Q9BXU7 913 aa19.93■□□□□ 0.78
TRIM56-203ENST00000467847 RTEL1Q9NZ71 1219 aa19.93■□□□□ 0.78
TRIM56-203ENST00000467847 LINC01553A4QN01 128 aa19.92■□□□□ 0.78
TRIM56-203ENST00000467847 FIBPO43427 364 aa19.92■□□□□ 0.78
TRIM56-203ENST00000467847 AMHP03971 560 aa19.92■□□□□ 0.78
TRIM56-203ENST00000467847 HOXC8P31273 242 aa19.92■□□□□ 0.78
TRIM56-203ENST00000467847 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.92■□□□□ 0.78
TRIM56-203ENST00000467847 ZNF654Q8IZM8 581 aa19.92■□□□□ 0.78
TRIM56-203ENST00000467847 DBF4BQ8NFT6 615 aa19.92■□□□□ 0.78
TRIM56-203ENST00000467847 SMARCC2Q8TAQ2 1214 aa19.92■□□□□ 0.78
TRIM56-203ENST00000467847 MAP4K1Q92918 833 aa19.92■□□□□ 0.78
TRIM56-203ENST00000467847 CUL5Q93034 780 aa19.92■□□□□ 0.78
TRIM56-203ENST00000467847 RRP36Q96EU6 259 aaKnown RBP19.92■□□□□ 0.78
TRIM56-203ENST00000467847 MYL10Q9BUA6 226 aa19.92■□□□□ 0.78
TRIM56-203ENST00000467847 SPZ1Q9BXG8 430 aa19.92■□□□□ 0.78
TRIM56-203ENST00000467847 RBM8AQ9Y5S9 174 aaKnown RBP19.92■□□□□ 0.78
TRIM56-203ENST00000467847 KAT6AQ92794 2004 aa19.92■□□□□ 0.78
TRIM56-203ENST00000467847 TREHO43280 583 aa19.91■□□□□ 0.78
TRIM56-203ENST00000467847 DDAH1O94760 285 aa19.91■□□□□ 0.78
TRIM56-203ENST00000467847 KIF5BP33176 963 aa19.91■□□□□ 0.78
TRIM56-203ENST00000467847 ERVK-21P61565 698 aa19.91■□□□□ 0.78
TRIM56-203ENST00000467847 SEMA3FQ13275 785 aa19.91■□□□□ 0.78
TRIM56-203ENST00000467847 USP17L6PQ6QN14 398 aa19.91■□□□□ 0.78
TRIM56-203ENST00000467847 MAP3K14Q99558 947 aa19.91■□□□□ 0.78
TRIM56-203ENST00000467847 GPR20Q99678 358 aa19.91■□□□□ 0.78
TRIM56-203ENST00000467847 RNPEPQ9H4A4 650 aa19.91■□□□□ 0.78
TRIM56-203ENST00000467847 SUGCTQ9HAC7 445 aa19.91■□□□□ 0.78
TRIM56-203ENST00000467847 LY9Q9HBG7 655 aa19.91■□□□□ 0.78
TRIM56-203ENST00000467847 LMCD1Q9NZU5 365 aa19.91■□□□□ 0.78
TRIM56-203ENST00000467847 SEC63Q9UGP8 760 aaKnown RBP19.91■□□□□ 0.78
TRIM56-203ENST00000467847 INSL6Q9Y581 213 aa19.91■□□□□ 0.78
TRIM56-203ENST00000467847 GNAT1P11488 350 aa19.9■□□□□ 0.78
TRIM56-203ENST00000467847 PLEKHG4Q58EX7 1191 aa19.9■□□□□ 0.78
TRIM56-203ENST00000467847 PCNX4Q63HM2 1172 aa19.9■□□□□ 0.78
TRIM56-203ENST00000467847 CASC1Q6TDU7 716 aa19.9■□□□□ 0.78
TRIM56-203ENST00000467847 MYOCDQ8IZQ8 938 aa19.9■□□□□ 0.78
TRIM56-203ENST00000467847 SETD4Q9NVD3 440 aa19.9■□□□□ 0.78
TRIM56-203ENST00000467847 ZNF215Q9UL58 517 aaPredicted RBP19.9■□□□□ 0.78
TRIM56-203ENST00000467847 PRC1O43663 620 aa19.89■□□□□ 0.77
TRIM56-203ENST00000467847 CAND2O75155 1236 aa19.89■□□□□ 0.77
TRIM56-203ENST00000467847 CTSHP09668 335 aa19.89■□□□□ 0.77
TRIM56-203ENST00000467847 IRX6P78412 446 aaPredicted RBP19.89■□□□□ 0.77
TRIM56-203ENST00000467847 SP4Q02446 784 aa19.89■□□□□ 0.77
TRIM56-203ENST00000467847 MKRN4PQ13434 485 aaPredicted RBP19.89■□□□□ 0.77
TRIM56-203ENST00000467847 XRRA1Q6P2D8 792 aa19.89■□□□□ 0.77
TRIM56-203ENST00000467847 NFXL1Q6ZNB6 911 aa19.89■□□□□ 0.77
TRIM56-203ENST00000467847 TRIM50Q86XT4 487 aa19.89■□□□□ 0.77
TRIM56-203ENST00000467847 SEPT8Q92599 483 aa19.89■□□□□ 0.77
TRIM56-203ENST00000467847 LZTS2Q9BRK4 669 aa19.89■□□□□ 0.77
TRIM56-203ENST00000467847 PIK3CDO00329 1044 aa19.88■□□□□ 0.77
TRIM56-203ENST00000467847 MEIS2O14770 477 aa19.88■□□□□ 0.77
TRIM56-203ENST00000467847 SMARCA1P28370 1054 aa19.88■□□□□ 0.77
TRIM56-203ENST00000467847 UTP14CQ5TAP6 766 aaKnown RBP19.88■□□□□ 0.77
TRIM56-203ENST00000467847 TELO2Q9Y4R8 837 aa19.88■□□□□ 0.77
TRIM56-203ENST00000467847 CCDC69A6NI79 296 aa19.87■□□□□ 0.77
TRIM56-203ENST00000467847 PLEKHA8P1O95397 391 aa19.87■□□□□ 0.77
TRIM56-203ENST00000467847 GNAQP50148 359 aa19.87■□□□□ 0.77
TRIM56-203ENST00000467847 HTRA4P83105 476 aaPredicted RBP19.87■□□□□ 0.77
TRIM56-203ENST00000467847 NLRX1Q86UT6 975 aa19.87■□□□□ 0.77
TRIM56-203ENST00000467847 FBXO22Q8NEZ5 403 aa19.87■□□□□ 0.77
TRIM56-203ENST00000467847 SENP7Q9BQF6 1050 aa19.87■□□□□ 0.77
TRIM56-203ENST00000467847 C17orf80Q9BSJ5 609 aa19.87■□□□□ 0.77
TRIM56-203ENST00000467847 MTA3Q9BTC8 594 aa19.87■□□□□ 0.77
TRIM56-203ENST00000467847 SH2B2O14492 632 aaPredicted RBP19.86■□□□□ 0.77
TRIM56-203ENST00000467847 MCM5P33992 734 aa19.86■□□□□ 0.77
TRIM56-203ENST00000467847 ARHGAP4P98171 946 aa19.86■□□□□ 0.77
TRIM56-203ENST00000467847 TMTC2Q8N394 836 aa19.86■□□□□ 0.77
TRIM56-203ENST00000467847 SRBD1Q8N5C6 995 aaKnown RBP19.86■□□□□ 0.77
TRIM56-203ENST00000467847 GIMAP8Q8ND71 665 aaPredicted RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms