RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	NFRKB	Q6P4R8	1299 aa		13.75	□□□□□ -0.21
CTNS-205	ENST00000467663	AFG1L	Q8WV93	481 aa		13.75	□□□□□ -0.21
CTNS-205	ENST00000467663	GLT8D2	Q9H1C3	349 aa		13.75	□□□□□ -0.21
CTNS-205	ENST00000467663	UMODL1	Q5DID0	1318 aa		13.74	□□□□□ -0.21
CTNS-205	ENST00000467663	MYCL	P12524	364 aa	Predicted RBP	13.74	□□□□□ -0.21
CTNS-205	ENST00000467663	LAMC2	Q13753	1193 aa		13.74	□□□□□ -0.21
CTNS-205	ENST00000467663	PKN1	Q16512	942 aa		13.74	□□□□□ -0.21
CTNS-205	ENST00000467663	RASIP1	Q5U651	963 aa		13.74	□□□□□ -0.21
CTNS-205	ENST00000467663	KRT40	Q6A162	431 aa		13.74	□□□□□ -0.21
CTNS-205	ENST00000467663	KCNV1	Q6PIU1	500 aa		13.74	□□□□□ -0.21
CTNS-205	ENST00000467663	IL31RA	Q8NI17	732 aa		13.74	□□□□□ -0.21
CTNS-205	ENST00000467663	PIBF1	Q8WXW3	757 aa		13.74	□□□□□ -0.21
CTNS-205	ENST00000467663	FOXP1	Q9H334	677 aa	Predicted RBP	13.74	□□□□□ -0.21
CTNS-205	ENST00000467663	IL23A	Q9NPF7	189 aa		13.74	□□□□□ -0.21
CTNS-205	ENST00000467663	TRMT13	Q9NUP7	481 aa	Known RBP	13.74	□□□□□ -0.21
CTNS-205	ENST00000467663	CFAP45	Q9UL16	551 aa		13.74	□□□□□ -0.21
CTNS-205	ENST00000467663	MRVI1	Q9Y6F6	885 aa		13.74	□□□□□ -0.21
CTNS-205	ENST00000467663	FRMPD4	Q14CM0	1322 aa		13.73	□□□□□ -0.21
CTNS-205	ENST00000467663	SCN10A	Q9Y5Y9	1956 aa		13.73	□□□□□ -0.21
CTNS-205	ENST00000467663	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	13.73	□□□□□ -0.21
CTNS-205	ENST00000467663	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	13.73	□□□□□ -0.21
CTNS-205	ENST00000467663	BAG4	O95429	457 aa	Known RBP	13.73	□□□□□ -0.21
CTNS-205	ENST00000467663	MMP1	P03956	469 aa		13.73	□□□□□ -0.21
CTNS-205	ENST00000467663	TGFB3	P10600	412 aa		13.73	□□□□□ -0.21
CTNS-205	ENST00000467663	CCND2	P30279	289 aa		13.73	□□□□□ -0.21
CTNS-205	ENST00000467663	ZNF697	Q5TEC3	545 aa		13.73	□□□□□ -0.21
CTNS-205	ENST00000467663	PPP1R18	Q6NYC8	613 aa		13.73	□□□□□ -0.21
CTNS-205	ENST00000467663	PSRC1	Q6PGN9	363 aa	Predicted RBP	13.73	□□□□□ -0.21
CTNS-205	ENST00000467663	ZNF365	Q70YC5	407 aa		13.73	□□□□□ -0.21
CTNS-205	ENST00000467663	FCHSD1	Q86WN1	690 aa		13.73	□□□□□ -0.21
CTNS-205	ENST00000467663	CCDC82	Q8N4S0	544 aa		13.73	□□□□□ -0.21
CTNS-205	ENST00000467663	ZNF396	Q96N95	335 aa	Predicted RBP	13.73	□□□□□ -0.21
CTNS-205	ENST00000467663	WNT8A	Q9H1J5	351 aa		13.73	□□□□□ -0.21
CTNS-205	ENST00000467663	STXBP5L	Q9Y2K9	1186 aa		13.73	□□□□□ -0.21
CTNS-205	ENST00000467663	ESYT2	A0FGR8	921 aa		13.72	□□□□□ -0.21
CTNS-205	ENST00000467663	PIK3CD	O00329	1044 aa		13.72	□□□□□ -0.21
CTNS-205	ENST00000467663	MEIS2	O14770	477 aa		13.72	□□□□□ -0.21
CTNS-205	ENST00000467663	STAM2	O75886	525 aa		13.72	□□□□□ -0.21
CTNS-205	ENST00000467663	ACR	P10323	421 aa		13.72	□□□□□ -0.21
CTNS-205	ENST00000467663	CYP2C9	P11712	490 aa		13.72	□□□□□ -0.21
CTNS-205	ENST00000467663	HOXD8	P13378	290 aa	Predicted RBP	13.72	□□□□□ -0.21
CTNS-205	ENST00000467663	U2AF2	P26368	475 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
CTNS-205	ENST00000467663	GNA11	P29992	359 aa		13.72	□□□□□ -0.21
CTNS-205	ENST00000467663	MCM4	P33991	863 aa		13.72	□□□□□ -0.21
CTNS-205	ENST00000467663	CCL23	P55773	120 aa		13.72	□□□□□ -0.21
CTNS-205	ENST00000467663	KRT85	P78386	507 aa		13.72	□□□□□ -0.21
CTNS-205	ENST00000467663	REST	Q13127	1097 aa		13.72	□□□□□ -0.21
CTNS-205	ENST00000467663	DGKD	Q16760	1214 aa		13.72	□□□□□ -0.21
CTNS-205	ENST00000467663	FAM47C	Q5HY64	1035 aa		13.72	□□□□□ -0.21
CTNS-205	ENST00000467663	CELF3	Q5SZQ8	465 aa	Known RBP	13.72	□□□□□ -0.21
CTNS-205	ENST00000467663	MYSM1	Q5VVJ2	828 aa		13.72	□□□□□ -0.21
CTNS-205	ENST00000467663	MCTP2	Q6DN12	878 aa		13.72	□□□□□ -0.21
CTNS-205	ENST00000467663	SESTD1	Q86VW0	696 aa		13.72	□□□□□ -0.21
CTNS-205	ENST00000467663	DHX37	Q8IY37	1157 aa	Known RBP	13.72	□□□□□ -0.21
CTNS-205	ENST00000467663	CMTR1	Q8N1G2	835 aa	Known RBP	13.72	□□□□□ -0.21
CTNS-205	ENST00000467663	PPTC7	Q8NI37	304 aa		13.72	□□□□□ -0.21
CTNS-205	ENST00000467663	BICD2	Q8TD16	824 aa		13.72	□□□□□ -0.21
CTNS-205	ENST00000467663	KAT2B	Q92831	832 aa		13.72	□□□□□ -0.21
CTNS-205	ENST00000467663	GUCD1	Q96NT3	240 aa		13.72	□□□□□ -0.21
CTNS-205	ENST00000467663	PHF20	Q9BVI0	1012 aa		13.72	□□□□□ -0.21
CTNS-205	ENST00000467663	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.72	□□□□□ -0.21
CTNS-205	ENST00000467663	BARHL2	Q9NY43	387 aa		13.72	□□□□□ -0.21
CTNS-205	ENST00000467663	KIAA1217	Q5T5P2	1943 aa		13.72	□□□□□ -0.21
CTNS-205	ENST00000467663	TMEM265	A0A087WTH1	108 aa		13.71	□□□□□ -0.21
CTNS-205	ENST00000467663	FGB	P02675	491 aa		13.71	□□□□□ -0.21
CTNS-205	ENST00000467663	ICAM3	P32942	547 aa		13.71	□□□□□ -0.21
CTNS-205	ENST00000467663	MRPS9	P82933	396 aa	Known RBP	13.71	□□□□□ -0.21
CTNS-205	ENST00000467663	SP2	Q02086	613 aa		13.71	□□□□□ -0.21
CTNS-205	ENST00000467663	GNL2	Q13823	731 aa	Known RBP	13.71	□□□□□ -0.21
CTNS-205	ENST00000467663	MCTP1	Q6DN14	999 aa		13.71	□□□□□ -0.21
CTNS-205	ENST00000467663	USP17L6P	Q6QN14	398 aa		13.71	□□□□□ -0.21
CTNS-205	ENST00000467663	DAGLB	Q8NCG7	672 aa		13.71	□□□□□ -0.21
CTNS-205	ENST00000467663	PPP1R13L	Q8WUF5	828 aa		13.71	□□□□□ -0.21
CTNS-205	ENST00000467663	HERVK_113	Q902F9	699 aa		13.71	□□□□□ -0.21
CTNS-205	ENST00000467663	CUL5	Q93034	780 aa		13.71	□□□□□ -0.21
CTNS-205	ENST00000467663	VWCE	Q96DN2	955 aa		13.71	□□□□□ -0.21
CTNS-205	ENST00000467663	INPP4A	Q96PE3	977 aa	Predicted RBP	13.71	□□□□□ -0.21
CTNS-205	ENST00000467663	SEMA6B	Q9H3T3	888 aa		13.71	□□□□□ -0.21
CTNS-205	ENST00000467663	SPATA31C2	B4DYI2	1134 aa		13.7	□□□□□ -0.22
CTNS-205	ENST00000467663	HAS3	O00219	553 aa		13.7	□□□□□ -0.22
CTNS-205	ENST00000467663	PITPNM1	O00562	1244 aa		13.7	□□□□□ -0.22
CTNS-205	ENST00000467663	PPFIA4	O75335	1185 aa		13.7	□□□□□ -0.22
CTNS-205	ENST00000467663	GGPS1	O95749	300 aa		13.7	□□□□□ -0.22
CTNS-205	ENST00000467663	UBA1	P22314	1058 aa	Known RBP	13.7	□□□□□ -0.22
CTNS-205	ENST00000467663	KRT2	P35908	639 aa		13.7	□□□□□ -0.22
CTNS-205	ENST00000467663	NLRP5	P59047	1200 aa		13.7	□□□□□ -0.22
CTNS-205	ENST00000467663	NFKBIB	Q15653	356 aa		13.7	□□□□□ -0.22
CTNS-205	ENST00000467663	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.7	□□□□□ -0.22
CTNS-205	ENST00000467663	GNPTAB	Q3T906	1256 aa		13.7	□□□□□ -0.22
CTNS-205	ENST00000467663	XRRA1	Q6P2D8	792 aa		13.7	□□□□□ -0.22
CTNS-205	ENST00000467663	RPUSD2	Q8IZ73	545 aa	Known RBP	13.7	□□□□□ -0.22
CTNS-205	ENST00000467663	TMEM87A	Q8NBN3	555 aa		13.7	□□□□□ -0.22
CTNS-205	ENST00000467663	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.7	□□□□□ -0.22
CTNS-205	ENST00000467663	ZFP91	Q96JP5	570 aa	Predicted RBP	13.7	□□□□□ -0.22
CTNS-205	ENST00000467663	ZMYND12	Q9H0C1	365 aa		13.7	□□□□□ -0.22
CTNS-205	ENST00000467663	TTYH1	Q9H313	450 aa	Predicted RBP	13.7	□□□□□ -0.22
CTNS-205	ENST00000467663	C6orf50	Q9HD87	102 aa		13.7	□□□□□ -0.22
CTNS-205	ENST00000467663	F2	P00734	622 aa		13.69	□□□□□ -0.22
CTNS-205	ENST00000467663	PFKM	P08237	780 aa		13.69	□□□□□ -0.22
CTNS-205	ENST00000467663	PSEN2	P49810	448 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms