RNA–Protein interactions for RNA: ENST00000466562.5

CRAMP1-204, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 4

Gene CRAMP1, Length 534 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-204ENST00000466562 GRXCR1A8MXD5 290 aa18.2■□□□□ 0.5
CRAMP1-204ENST00000466562 H3BRB1 525 aa18.2■□□□□ 0.5
CRAMP1-204ENST00000466562 FOSP01100 380 aaPredicted RBP18.2■□□□□ 0.5
CRAMP1-204ENST00000466562 PFKMP08237 780 aa18.2■□□□□ 0.5
CRAMP1-204ENST00000466562 PDIA3P30101 505 aaKnown RBP18.2■□□□□ 0.5
CRAMP1-204ENST00000466562 RFC2P35250 354 aa18.2■□□□□ 0.5
CRAMP1-204ENST00000466562 CLK2P49760 499 aaKnown RBP18.2■□□□□ 0.5
CRAMP1-204ENST00000466562 HIC1Q14526 733 aa18.2■□□□□ 0.5
CRAMP1-204ENST00000466562 DEFB128Q7Z7B8 93 aa18.2■□□□□ 0.5
CRAMP1-204ENST00000466562 GIMAP8Q8ND71 665 aaPredicted RBP18.2■□□□□ 0.5
CRAMP1-204ENST00000466562 CDHR1Q96JP9 859 aa18.2■□□□□ 0.5
CRAMP1-204ENST00000466562 PGBD1Q96JS3 809 aa18.2■□□□□ 0.5
CRAMP1-204ENST00000466562 TM6SF1Q9BZW5 370 aa18.2■□□□□ 0.5
CRAMP1-204ENST00000466562 MTIF3Q9H2K0 278 aaKnown RBP18.2■□□□□ 0.5
CRAMP1-204ENST00000466562 TUT1Q9H6E5 874 aaKnown RBP18.2■□□□□ 0.5
CRAMP1-204ENST00000466562 EHMT1Q9H9B1 1298 aa18.2■□□□□ 0.5
CRAMP1-204ENST00000466562 JADE2Q9NQC1 790 aa18.2■□□□□ 0.5
CRAMP1-204ENST00000466562 STXBP5LQ9Y2K9 1186 aa18.2■□□□□ 0.5
CRAMP1-204ENST00000466562 COL6A3P12111 3177 aa18.19■□□□□ 0.5
CRAMP1-204ENST00000466562 MAFGO15525 162 aa18.19■□□□□ 0.5
CRAMP1-204ENST00000466562 PRPF3O43395 683 aaKnown RBP18.19■□□□□ 0.5
CRAMP1-204ENST00000466562 SCG2P13521 617 aa18.19■□□□□ 0.5
CRAMP1-204ENST00000466562 KCNA2P16389 499 aa18.19■□□□□ 0.5
CRAMP1-204ENST00000466562 DNAJB2P25686 324 aa18.19■□□□□ 0.5
CRAMP1-204ENST00000466562 ZNF200P98182 395 aaPredicted RBP18.19■□□□□ 0.5
CRAMP1-204ENST00000466562 RBL2Q08999 1139 aa18.19■□□□□ 0.5
CRAMP1-204ENST00000466562 MTMR1Q13613 665 aa18.19■□□□□ 0.5
CRAMP1-204ENST00000466562 TOB2Q14106 344 aaPredicted RBP18.19■□□□□ 0.5
CRAMP1-204ENST00000466562 NTRK3Q16288 839 aa18.19■□□□□ 0.5
CRAMP1-204ENST00000466562 PKN1Q16512 942 aa18.19■□□□□ 0.5
CRAMP1-204ENST00000466562 CCDC155Q8N6L0 562 aa18.19■□□□□ 0.5
CRAMP1-204ENST00000466562 PHKBQ93100 1093 aa18.19■□□□□ 0.5
CRAMP1-204ENST00000466562 GLT8D2Q9H1C3 349 aa18.19■□□□□ 0.5
CRAMP1-204ENST00000466562 TMEM260Q9NX78 707 aa18.19■□□□□ 0.5
CRAMP1-204ENST00000466562 CYP46A1Q9Y6A2 500 aa18.19■□□□□ 0.5
CRAMP1-204ENST00000466562 MYH7BA7E2Y1 1941 aa18.19■□□□□ 0.5
CRAMP1-204ENST00000466562 TMEM265A0A087WTH1 108 aa18.18■□□□□ 0.5
CRAMP1-204ENST00000466562 CCT2P78371 535 aaKnown RBP18.18■□□□□ 0.5
CRAMP1-204ENST00000466562 SP4Q02446 784 aa18.18■□□□□ 0.5
CRAMP1-204ENST00000466562 PTK7Q13308 1070 aa18.18■□□□□ 0.5
CRAMP1-204ENST00000466562 AP3B2Q13367 1082 aa18.18■□□□□ 0.5
CRAMP1-204ENST00000466562 AFAP1L1Q8TED9 768 aa18.18■□□□□ 0.5
CRAMP1-204ENST00000466562 MXRA8Q9BRK3 442 aa18.18■□□□□ 0.5
CRAMP1-204ENST00000466562 ANO3Q9BYT9 981 aa18.18■□□□□ 0.5
CRAMP1-204ENST00000466562 PBX4Q9BYU1 374 aa18.18■□□□□ 0.5
CRAMP1-204ENST00000466562 CKBP12277 381 aa18.17■□□□□ 0.5
CRAMP1-204ENST00000466562 SELPP16109 830 aa18.17■□□□□ 0.5
CRAMP1-204ENST00000466562 PBX2P40425 430 aa18.17■□□□□ 0.5
CRAMP1-204ENST00000466562 GPNMBQ14956 572 aa18.17■□□□□ 0.5
CRAMP1-204ENST00000466562 TRIM71Q2Q1W2 868 aaKnown RBP18.17■□□□□ 0.5
CRAMP1-204ENST00000466562 UTP14CQ5TAP6 766 aaKnown RBP18.17■□□□□ 0.5
CRAMP1-204ENST00000466562 LRRC8DQ7L1W4 858 aa18.17■□□□□ 0.5
CRAMP1-204ENST00000466562 TRIM50Q86XT4 487 aa18.17■□□□□ 0.5
CRAMP1-204ENST00000466562 CYP2W1Q8TAV3 490 aa18.17■□□□□ 0.5
CRAMP1-204ENST00000466562 WNT8BQ93098 351 aa18.17■□□□□ 0.5
CRAMP1-204ENST00000466562 TIFAQ96CG3 184 aa18.17■□□□□ 0.5
CRAMP1-204ENST00000466562 CDX2Q99626 313 aaPredicted RBP18.17■□□□□ 0.5
CRAMP1-204ENST00000466562 UPF3BQ9BZI7 483 aaKnown RBP18.17■□□□□ 0.5
CRAMP1-204ENST00000466562 ZMYND12Q9H0C1 365 aa18.17■□□□□ 0.5
CRAMP1-204ENST00000466562 NCOA5Q9HCD5 579 aaKnown RBP18.17■□□□□ 0.5
CRAMP1-204ENST00000466562 PKD2L1Q9P0L9 805 aa18.17■□□□□ 0.5
CRAMP1-204ENST00000466562 ESYT2A0FGR8 921 aa18.16■□□□□ 0.5
CRAMP1-204ENST00000466562 C17orf102A2RUQ5 167 aa18.16■□□□□ 0.5
CRAMP1-204ENST00000466562 ZBBXA8MT70 800 aa18.16■□□□□ 0.5
CRAMP1-204ENST00000466562 PPFIA3O75145 1194 aa18.16■□□□□ 0.5
CRAMP1-204ENST00000466562 SMIM10L2AP0DMW4 78 aa18.16■□□□□ 0.5
CRAMP1-204ENST00000466562 SMIM10L2BP0DMW5 78 aa18.16■□□□□ 0.5
CRAMP1-204ENST00000466562 IFNAR1P17181 557 aa18.16■□□□□ 0.5
CRAMP1-204ENST00000466562 HOXC8P31273 242 aa18.16■□□□□ 0.5
CRAMP1-204ENST00000466562 TCF7P36402 384 aaPredicted RBP18.16■□□□□ 0.5
CRAMP1-204ENST00000466562 SREBF1P36956 1147 aa18.16■□□□□ 0.5
CRAMP1-204ENST00000466562 SEPT1Q8WYJ6 367 aa18.16■□□□□ 0.5
CRAMP1-204ENST00000466562 LARP6Q9BRS8 491 aaKnown RBP18.16■□□□□ 0.5
CRAMP1-204ENST00000466562 RNF26Q9BY78 433 aaPredicted RBP18.16■□□□□ 0.5
CRAMP1-204ENST00000466562 FTOQ9C0B1 505 aaKnown RBP eCLIP18.16■□□□□ 0.5
CRAMP1-204ENST00000466562 RNPEPQ9H4A4 650 aa18.16■□□□□ 0.5
CRAMP1-204ENST00000466562 KCNH7Q9NS40 1196 aa18.16■□□□□ 0.5
CRAMP1-204ENST00000466562 SLC4A7Q9Y6M7 1214 aa18.16■□□□□ 0.5
CRAMP1-204ENST00000466562 CDH23Q9H251 3354 aa18.16■□□□□ 0.5
CRAMP1-204ENST00000466562 GSTTP1A0A1W2PQM5 241 aa18.15■□□□□ 0.5
CRAMP1-204ENST00000466562 ADAMTS3O15072 1205 aa18.15■□□□□ 0.5
CRAMP1-204ENST00000466562 ACTN1P12814 892 aa18.15■□□□□ 0.5
CRAMP1-204ENST00000466562 AKAP17AQ02040 695 aaKnown RBP18.15■□□□□ 0.5
CRAMP1-204ENST00000466562 CEP55Q53EZ4 464 aa18.15■□□□□ 0.5
CRAMP1-204ENST00000466562 JAKMIP3Q5VZ66 844 aa18.15■□□□□ 0.5
CRAMP1-204ENST00000466562 TRAF7Q6Q0C0 670 aa18.15■□□□□ 0.5
CRAMP1-204ENST00000466562 SERINC5Q86VE9 423 aa18.15■□□□□ 0.5
CRAMP1-204ENST00000466562 CCDC12Q8WUD4 166 aaPredicted RBP18.15■□□□□ 0.5
CRAMP1-204ENST00000466562 ATP6V0A1Q93050 837 aa18.15■□□□□ 0.5
CRAMP1-204ENST00000466562 ZNF274Q96GC6 653 aaPredicted RBP18.15■□□□□ 0.5
CRAMP1-204ENST00000466562 SLC26A6Q9BXS9 759 aa18.15■□□□□ 0.5
CRAMP1-204ENST00000466562 C6orf50Q9HD87 102 aa18.15■□□□□ 0.5
CRAMP1-204ENST00000466562 PDRG1Q9NUG6 133 aa18.15■□□□□ 0.5
CRAMP1-204ENST00000466562 ZNF215Q9UL58 517 aaPredicted RBP18.15■□□□□ 0.5
CRAMP1-204ENST00000466562 MEIS1O00470 390 aa18.14■□□□□ 0.49
CRAMP1-204ENST00000466562 TREHO43280 583 aa18.14■□□□□ 0.49
CRAMP1-204ENST00000466562 PARNO95453 639 aaKnown RBP18.14■□□□□ 0.49
CRAMP1-204ENST00000466562 ARP10275 920 aa18.14■□□□□ 0.49
CRAMP1-204ENST00000466562 ARHGAP4P98171 946 aa18.14■□□□□ 0.49
CRAMP1-204ENST00000466562 ZNF618Q5T7W0 954 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms