RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 TNFAIP2Q03169 654 aa11.28□□□□□ -0.6
PMF1-204ENST00000466489 TRIM32Q13049 653 aa11.28□□□□□ -0.6
PMF1-204ENST00000466489 CCDC144BQ3MJ40 725 aa11.28□□□□□ -0.6
PMF1-204ENST00000466489 TAF3Q5VWG9 929 aa11.28□□□□□ -0.6
PMF1-204ENST00000466489 JAKMIP3Q5VZ66 844 aa11.28□□□□□ -0.6
PMF1-204ENST00000466489 PCNX4Q63HM2 1172 aa11.28□□□□□ -0.6
PMF1-204ENST00000466489 IQSEC1Q6DN90 963 aa11.28□□□□□ -0.6
PMF1-204ENST00000466489 TYW1BQ6NUM6 668 aa11.28□□□□□ -0.6
PMF1-204ENST00000466489 KRT25Q7Z3Z0 450 aa11.28□□□□□ -0.6
PMF1-204ENST00000466489 NLRX1Q86UT6 975 aa11.28□□□□□ -0.6
PMF1-204ENST00000466489 FBXO16Q8IX29 292 aaPredicted RBP11.28□□□□□ -0.6
PMF1-204ENST00000466489 BLIDQ8IZY5 108 aa11.28□□□□□ -0.6
PMF1-204ENST00000466489 DAGLBQ8NCG7 672 aa11.28□□□□□ -0.6
PMF1-204ENST00000466489 ARRDC4Q8NCT1 418 aa11.28□□□□□ -0.6
PMF1-204ENST00000466489 CCDC150Q8NCX0 1101 aa11.28□□□□□ -0.6
PMF1-204ENST00000466489 CCDC112Q8NEF3 446 aa11.28□□□□□ -0.6
PMF1-204ENST00000466489 U2AF1L4Q8WU68 220 aaKnown RBP11.28□□□□□ -0.6
PMF1-204ENST00000466489 SDF4Q9BRK5 362 aa11.28□□□□□ -0.6
PMF1-204ENST00000466489 ANO3Q9BYT9 981 aa11.28□□□□□ -0.6
PMF1-204ENST00000466489 AP5M1Q9H0R1 490 aa11.28□□□□□ -0.6
PMF1-204ENST00000466489 POLR3EQ9NVU0 708 aa11.28□□□□□ -0.6
PMF1-204ENST00000466489 CGNQ9P2M7 1197 aaKnown RBP11.28□□□□□ -0.6
PMF1-204ENST00000466489 DACH1Q9UI36 760 aa11.28□□□□□ -0.6
PMF1-204ENST00000466489 FRMPD4Q14CM0 1322 aa11.28□□□□□ -0.6
PMF1-204ENST00000466489 DUSP11O75319 330 aaKnown RBP11.27□□□□□ -0.61
PMF1-204ENST00000466489 SGPL1O95470 568 aa11.27□□□□□ -0.61
PMF1-204ENST00000466489 IGHA2P01877 340 aa11.27□□□□□ -0.61
PMF1-204ENST00000466489 ZNF865P0CJ78 1059 aaPredicted RBP11.27□□□□□ -0.61
PMF1-204ENST00000466489 ME1P48163 572 aa11.27□□□□□ -0.61
PMF1-204ENST00000466489 GJA8P48165 433 aa11.27□□□□□ -0.61
PMF1-204ENST00000466489 ZNF75DP51815 510 aa11.27□□□□□ -0.61
PMF1-204ENST00000466489 RESTQ13127 1097 aa11.27□□□□□ -0.61
PMF1-204ENST00000466489 PRAMEF19Q5SWL8 479 aa11.27□□□□□ -0.61
PMF1-204ENST00000466489 KANK3Q6NY19 840 aa11.27□□□□□ -0.61
PMF1-204ENST00000466489 SEPT14Q6ZU15 432 aa11.27□□□□□ -0.61
PMF1-204ENST00000466489 RNF180Q86T96 592 aa11.27□□□□□ -0.61
PMF1-204ENST00000466489 VSIG10LQ86VR7 867 aa11.27□□□□□ -0.61
PMF1-204ENST00000466489 PLA2G4DQ86XP0 818 aa11.27□□□□□ -0.61
PMF1-204ENST00000466489 ANKLE1Q8NAG6 615 aa11.27□□□□□ -0.61
PMF1-204ENST00000466489 MRPS27Q92552 414 aaKnown RBP11.27□□□□□ -0.61
PMF1-204ENST00000466489 PHF20Q9BVI0 1012 aa11.27□□□□□ -0.61
PMF1-204ENST00000466489 SRRTQ9BXP5 876 aaKnown RBP11.27□□□□□ -0.61
PMF1-204ENST00000466489 XPNPEP3Q9NQH7 507 aa11.27□□□□□ -0.61
PMF1-204ENST00000466489 MRVI1Q9Y6F6 885 aa11.27□□□□□ -0.61
PMF1-204ENST00000466489 ASTN1O14525 1302 aa11.27□□□□□ -0.61
PMF1-204ENST00000466489 KBTBD13C9JR72 458 aa11.26□□□□□ -0.61
PMF1-204ENST00000466489 MAFGO15525 162 aa11.26□□□□□ -0.61
PMF1-204ENST00000466489 CTIFO43310 598 aaKnown RBP11.26□□□□□ -0.61
PMF1-204ENST00000466489 ZEB2O60315 1214 aa11.26□□□□□ -0.61
PMF1-204ENST00000466489 MYCNP04198 464 aaPredicted RBP11.26□□□□□ -0.61
PMF1-204ENST00000466489 TGFB3P10600 412 aa11.26□□□□□ -0.61
PMF1-204ENST00000466489 FDPSP14324 419 aaKnown RBP11.26□□□□□ -0.61
PMF1-204ENST00000466489 SREBF1P36956 1147 aa11.26□□□□□ -0.61
PMF1-204ENST00000466489 CLK2P49760 499 aaKnown RBP11.26□□□□□ -0.61
PMF1-204ENST00000466489 NONOQ15233 471 aaKnown RBP eCLIP11.26□□□□□ -0.61
PMF1-204ENST00000466489 FOXD4L6Q3SYB3 417 aaPredicted RBP11.26□□□□□ -0.61
PMF1-204ENST00000466489 ANO6Q4KMQ2 910 aa11.26□□□□□ -0.61
PMF1-204ENST00000466489 UTP14CQ5TAP6 766 aaKnown RBP11.26□□□□□ -0.61
PMF1-204ENST00000466489 FOXD4L3Q6VB84 417 aaPredicted RBP11.26□□□□□ -0.61
PMF1-204ENST00000466489 GIMAP8Q8ND71 665 aaPredicted RBP11.26□□□□□ -0.61
PMF1-204ENST00000466489 AIFM3Q96NN9 605 aa11.26□□□□□ -0.61
PMF1-204ENST00000466489 NAP1L4Q99733 375 aaKnown RBP11.26□□□□□ -0.61
PMF1-204ENST00000466489 PYM1Q9BRP8 204 aaKnown RBP11.26□□□□□ -0.61
PMF1-204ENST00000466489 WDR11Q9BZH6 1224 aa11.26□□□□□ -0.61
PMF1-204ENST00000466489 CBX8Q9HC52 389 aa11.26□□□□□ -0.61
PMF1-204ENST00000466489 TCEAL9Q9UHQ7 104 aa11.26□□□□□ -0.61
PMF1-204ENST00000466489 KCNJ14Q9UNX9 436 aa11.26□□□□□ -0.61
PMF1-204ENST00000466489 Q9Y3F1 56 aa11.26□□□□□ -0.61
PMF1-204ENST00000466489 HTTP42858 3142 aa11.25□□□□□ -0.61
PMF1-204ENST00000466489 IKBKBO14920 756 aa11.25□□□□□ -0.61
PMF1-204ENST00000466489 MMP1P03956 469 aa11.25□□□□□ -0.61
PMF1-204ENST00000466489 TXNP10599 105 aaKnown RBP11.25□□□□□ -0.61
PMF1-204ENST00000466489 CMA1P23946 247 aa11.25□□□□□ -0.61
PMF1-204ENST00000466489 ADCYAP1R1P41586 468 aa11.25□□□□□ -0.61
PMF1-204ENST00000466489 CPT1AP50416 773 aa11.25□□□□□ -0.61
PMF1-204ENST00000466489 FOSBP53539 338 aa11.25□□□□□ -0.61
PMF1-204ENST00000466489 SOX10P56693 466 aa11.25□□□□□ -0.61
PMF1-204ENST00000466489 ARHGAP4P98171 946 aa11.25□□□□□ -0.61
PMF1-204ENST00000466489 SETQ01105 290 aaPredicted RBP11.25□□□□□ -0.61
PMF1-204ENST00000466489 ST3GAL1Q11201 340 aa11.25□□□□□ -0.61
PMF1-204ENST00000466489 MTMR1Q13613 665 aa11.25□□□□□ -0.61
PMF1-204ENST00000466489 DUSP28Q4G0W2 176 aa11.25□□□□□ -0.61
PMF1-204ENST00000466489 KRT40Q6A162 431 aa11.25□□□□□ -0.61
PMF1-204ENST00000466489 TLK2Q86UE8 772 aa11.25□□□□□ -0.61
PMF1-204ENST00000466489 PCSK9Q8NBP7 692 aaKnown RBP11.25□□□□□ -0.61
PMF1-204ENST00000466489 TRPV1Q8NER1 839 aa11.25□□□□□ -0.61
PMF1-204ENST00000466489 KIF18AQ8NI77 898 aa11.25□□□□□ -0.61
PMF1-204ENST00000466489 GPRASP2Q96D09 838 aa11.25□□□□□ -0.61
PMF1-204ENST00000466489 KATNBL1Q9H079 304 aa11.25□□□□□ -0.61
PMF1-204ENST00000466489 CEP131Q9UPN4 1083 aa11.25□□□□□ -0.61
PMF1-204ENST00000466489 RBM47A0AV96 593 aaKnown RBP11.24□□□□□ -0.61
PMF1-204ENST00000466489 PPP6R2O75170 966 aa11.24□□□□□ -0.61
PMF1-204ENST00000466489 BMP15O95972 392 aa11.24□□□□□ -0.61
PMF1-204ENST00000466489 GH1P01241 217 aa11.24□□□□□ -0.61
PMF1-204ENST00000466489 C6orf222P0C671 652 aaPredicted RBP11.24□□□□□ -0.61
PMF1-204ENST00000466489 USP11P51784 963 aa11.24□□□□□ -0.61
PMF1-204ENST00000466489 SEMA3FQ13275 785 aa11.24□□□□□ -0.61
PMF1-204ENST00000466489 TUBB2AQ13885 445 aa11.24□□□□□ -0.61
PMF1-204ENST00000466489 NEDD9Q14511 834 aa11.24□□□□□ -0.61
PMF1-204ENST00000466489 PTPN14Q15678 1187 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms