RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 ZNF844Q08AG5 666 aa21.68■■□□□ 1.06
SDF4-205ENST00000465727 KCNMA1Q12791 1236 aa21.68■■□□□ 1.06
SDF4-205ENST00000465727 XRCC4Q13426 336 aa21.68■■□□□ 1.06
SDF4-205ENST00000465727 NONOQ15233 471 aaKnown RBP eCLIP21.68■■□□□ 1.061e-7■■■■□ 26.4
SDF4-205ENST00000465727 NBPF9Q3BBW0 867 aa21.68■■□□□ 1.06
SDF4-205ENST00000465727 C10orf76Q5T2E6 689 aa21.68■■□□□ 1.06
SDF4-205ENST00000465727 ACTRT1Q8TDG2 376 aa21.68■■□□□ 1.06
SDF4-205ENST00000465727 SEC16BQ96JE7 1060 aa21.68■■□□□ 1.06
SDF4-205ENST00000465727 MMTAG2Q9BU76 263 aaKnown RBP21.68■■□□□ 1.06
SDF4-205ENST00000465727 LRRC27Q9C0I9 530 aa21.68■■□□□ 1.06
SDF4-205ENST00000465727 IFI16Q16666 785 aaKnown RBP21.67■■□□□ 1.06
SDF4-205ENST00000465727 FAM83BQ5T0W9 1011 aa21.67■■□□□ 1.06
SDF4-205ENST00000465727 HEATR3Q7Z4Q2 680 aa21.67■■□□□ 1.06
SDF4-205ENST00000465727 SCFD2Q8WU76 684 aa21.67■■□□□ 1.06
SDF4-205ENST00000465727 TANGO6Q9C0B7 1094 aa21.67■■□□□ 1.06
SDF4-205ENST00000465727 ZMYND12Q9H0C1 365 aa21.67■■□□□ 1.06
SDF4-205ENST00000465727 SWAP70Q9UH65 585 aa21.67■■□□□ 1.06
SDF4-205ENST00000465727 CCNT1O60563 726 aaKnown RBP21.67■■□□□ 1.06
SDF4-205ENST00000465727 TLR2O60603 784 aa21.67■■□□□ 1.06
SDF4-205ENST00000465727 UBE4AQ14139 1066 aa21.67■■□□□ 1.06
SDF4-205ENST00000465727 UAP1Q16222 522 aaPredicted RBP21.67■■□□□ 1.06
SDF4-205ENST00000465727 KIAA0753Q2KHM9 967 aa21.67■■□□□ 1.06
SDF4-205ENST00000465727 CAVIN4Q5BKX8 364 aa21.67■■□□□ 1.06
SDF4-205ENST00000465727 GKAP1Q5VSY0 366 aaPredicted RBP21.67■■□□□ 1.06
SDF4-205ENST00000465727 TMC4Q7Z404 712 aa21.67■■□□□ 1.06
SDF4-205ENST00000465727 N4BP2L2Q92802 583 aaPredicted RBP21.67■■□□□ 1.06
SDF4-205ENST00000465727 TATDN2Q93075 761 aa21.67■■□□□ 1.06
SDF4-205ENST00000465727 HPS3Q969F9 1004 aa21.67■■□□□ 1.06
SDF4-205ENST00000465727 KDM4CQ9H3R0 1056 aa21.67■■□□□ 1.06
SDF4-205ENST00000465727 MAD2L2Q9UI95 211 aa21.67■■□□□ 1.06
SDF4-205ENST00000465727 PHLPP1O60346 1717 aa21.66■■□□□ 1.06
SDF4-205ENST00000465727 RPS6KA1Q15418 735 aa21.66■■□□□ 1.06
SDF4-205ENST00000465727 PARP10Q53GL7 1025 aa21.66■■□□□ 1.06
SDF4-205ENST00000465727 NEK8Q86SG6 692 aa21.66■■□□□ 1.06
SDF4-205ENST00000465727 KLHL7Q8IXQ5 586 aa21.66■■□□□ 1.06
SDF4-205ENST00000465727 ZNF384Q8TF68 577 aa21.66■■□□□ 1.06
SDF4-205ENST00000465727 LZTS2Q9BRK4 669 aa21.66■■□□□ 1.06
SDF4-205ENST00000465727 CNOT10Q9H9A5 744 aaKnown RBP21.66■■□□□ 1.06
SDF4-205ENST00000465727 LEMD3Q9Y2U8 911 aa21.66■■□□□ 1.06
SDF4-205ENST00000465727 CCDC188H7C350 402 aa21.65■■□□□ 1.06
SDF4-205ENST00000465727 DNM1LO00429 736 aa21.65■■□□□ 1.06
SDF4-205ENST00000465727 DNAJC8O75937 253 aaPredicted RBP21.65■■□□□ 1.06
SDF4-205ENST00000465727 GCFC2P16383 781 aaKnown RBP21.65■■□□□ 1.06
SDF4-205ENST00000465727 TECP42680 631 aa21.65■■□□□ 1.06
SDF4-205ENST00000465727 TRADDQ15628 312 aa21.65■■□□□ 1.06
SDF4-205ENST00000465727 LETM2Q2VYF4 491 aa21.65■■□□□ 1.06
SDF4-205ENST00000465727 TBC1D5Q92609 795 aa21.65■■□□□ 1.06
SDF4-205ENST00000465727 NLRC4Q9NPP4 1024 aa21.65■■□□□ 1.06
SDF4-205ENST00000465727 COL4A3BPQ9Y5P4 624 aa21.65■■□□□ 1.06
SDF4-205ENST00000465727 MYMKA6NI61 221 aa21.65■■□□□ 1.06
SDF4-205ENST00000465727 NOL4O94818 638 aa21.65■■□□□ 1.06
SDF4-205ENST00000465727 ADAMTS2O95450 1211 aa21.65■■□□□ 1.06
SDF4-205ENST00000465727 GYG1P46976 350 aa21.65■■□□□ 1.06
SDF4-205ENST00000465727 SCTRP47872 440 aa21.65■■□□□ 1.06
SDF4-205ENST00000465727 USP11P51784 963 aa21.65■■□□□ 1.06
SDF4-205ENST00000465727 ODF2Q5BJF6 829 aa21.65■■□□□ 1.06
SDF4-205ENST00000465727 LARP4BQ92615 738 aaKnown RBP21.65■■□□□ 1.06
SDF4-205ENST00000465727 MIEF2Q96C03 454 aa21.65■■□□□ 1.06
SDF4-205ENST00000465727 BLOC1S4Q9NUP1 217 aa21.65■■□□□ 1.06
SDF4-205ENST00000465727 AIPL1Q9NZN9 384 aa21.65■■□□□ 1.06
SDF4-205ENST00000465727 MYH4Q9Y623 1939 aa21.65■■□□□ 1.06
SDF4-205ENST00000465727 GNA14O95837 355 aa21.64■■□□□ 1.05
SDF4-205ENST00000465727 DNA2P51530 1060 aa21.64■■□□□ 1.05
SDF4-205ENST00000465727 FKBP3Q00688 224 aaKnown RBP21.64■■□□□ 1.05
SDF4-205ENST00000465727 SPDYCQ5MJ68 293 aa21.64■■□□□ 1.05
SDF4-205ENST00000465727 NSUN4Q96CB9 384 aaKnown RBP21.64■■□□□ 1.05
SDF4-205ENST00000465727 SLC4A9Q96Q91 983 aa21.64■■□□□ 1.05
SDF4-205ENST00000465727 ATP6V0A4Q9HBG4 840 aa21.64■■□□□ 1.05
SDF4-205ENST00000465727 KCNK3O14649 394 aa21.64■■□□□ 1.05
SDF4-205ENST00000465727 KIF4AO95239 1232 aa21.64■■□□□ 1.05
SDF4-205ENST00000465727 GNA11P29992 359 aa21.64■■□□□ 1.05
SDF4-205ENST00000465727 ATP2B2Q01814 1243 aa21.64■■□□□ 1.05
SDF4-205ENST00000465727 GRB10Q13322 594 aa21.64■■□□□ 1.05
SDF4-205ENST00000465727 QPCTQ16769 361 aa21.64■■□□□ 1.05
SDF4-205ENST00000465727 BRINP3Q76B58 766 aa21.64■■□□□ 1.05
SDF4-205ENST00000465727 BANK1Q8NDB2 785 aa21.64■■□□□ 1.05
SDF4-205ENST00000465727 CEP63Q96MT8 703 aa21.64■■□□□ 1.05
SDF4-205ENST00000465727 ATP8B3O60423 1300 aa21.63■■□□□ 1.05
SDF4-205ENST00000465727 BCL9O00512 1426 aa21.63■■□□□ 1.05
SDF4-205ENST00000465727 MAST2Q6P0Q8 1798 aa21.63■■□□□ 1.05
SDF4-205ENST00000465727 MGRN1O60291 552 aa21.63■■□□□ 1.05
SDF4-205ENST00000465727 CRYMQ14894 314 aa21.63■■□□□ 1.05
SDF4-205ENST00000465727 CEP57Q86XR8 500 aa21.63■■□□□ 1.05
SDF4-205ENST00000465727 CCT6BQ92526 530 aa21.63■■□□□ 1.05
SDF4-205ENST00000465727 RAPGEF5Q92565 580 aa21.63■■□□□ 1.05
SDF4-205ENST00000465727 CENPTQ96BT3 561 aa21.63■■□□□ 1.05
SDF4-205ENST00000465727 SLITRK6Q9H5Y7 841 aa21.63■■□□□ 1.05
SDF4-205ENST00000465727 C6orf50Q9HD87 102 aa21.63■■□□□ 1.05
SDF4-205ENST00000465727 HAUS2Q9NVX0 235 aa21.63■■□□□ 1.05
SDF4-205ENST00000465727 TPX2Q9ULW0 747 aaKnown RBP21.63■■□□□ 1.05
SDF4-205ENST00000465727 PACSIN2Q9UNF0 486 aaPredicted RBP21.63■■□□□ 1.05
SDF4-205ENST00000465727 A0A087X0T9 212 aa21.62■■□□□ 1.05
SDF4-205ENST00000465727 A0A0G2JS52 829 aa21.62■■□□□ 1.05
SDF4-205ENST00000465727 PGRMC1O00264 195 aaKnown RBP21.62■■□□□ 1.05
SDF4-205ENST00000465727 CYTH3O43739 400 aa21.62■■□□□ 1.05
SDF4-205ENST00000465727 ZPR1O75312 459 aa21.62■■□□□ 1.05
SDF4-205ENST00000465727 FAM228BP0C875 321 aa21.62■■□□□ 1.05
SDF4-205ENST00000465727 MARSP56192 900 aaKnown RBP21.62■■□□□ 1.05
SDF4-205ENST00000465727 POLR2FP61218 127 aaKnown RBP21.62■■□□□ 1.05
SDF4-205ENST00000465727 TFAP4Q01664 338 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms