RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 ZSWIM6Q9HCJ5 1215 aa24.98■■□□□ 1.59
LIME1-203ENST00000465591 CDH23Q9H251 3354 aa24.98■■□□□ 1.59
LIME1-203ENST00000465591 PPFIA3O75145 1194 aa24.97■■□□□ 1.59
LIME1-203ENST00000465591 KCNA2P16389 499 aa24.97■■□□□ 1.59
LIME1-203ENST00000465591 DNAJB2P25686 324 aa24.97■■□□□ 1.59
LIME1-203ENST00000465591 SP4Q02446 784 aa24.97■■□□□ 1.59
LIME1-203ENST00000465591 TOB2Q14106 344 aaPredicted RBP24.97■■□□□ 1.59
LIME1-203ENST00000465591 PFKFB3Q16875 520 aaPredicted RBP24.97■■□□□ 1.59
LIME1-203ENST00000465591 RUFY3Q7L099 469 aa24.97■■□□□ 1.59
LIME1-203ENST00000465591 NLRX1Q86UT6 975 aa24.97■■□□□ 1.59
LIME1-203ENST00000465591 GPRASP2Q96D09 838 aa24.97■■□□□ 1.59
LIME1-203ENST00000465591 SENP7Q9BQF6 1050 aa24.97■■□□□ 1.59
LIME1-203ENST00000465591 TMEM260Q9NX78 707 aa24.97■■□□□ 1.59
LIME1-203ENST00000465591 STXBP5LQ9Y2K9 1186 aa24.97■■□□□ 1.59
LIME1-203ENST00000465591 SMCO2A6NFE2 343 aa24.96■■□□□ 1.59
LIME1-203ENST00000465591 hCG_1984214I3L0E3 225 aa24.96■■□□□ 1.59
LIME1-203ENST00000465591 NOP56O00567 594 aaKnown RBP24.96■■□□□ 1.59
LIME1-203ENST00000465591 ADCY7P51828 1080 aa24.96■■□□□ 1.59
LIME1-203ENST00000465591 EVCP57679 992 aa24.96■■□□□ 1.59
LIME1-203ENST00000465591 BFSP2Q13515 415 aa24.96■■□□□ 1.59
LIME1-203ENST00000465591 GPNMBQ14956 572 aa24.96■■□□□ 1.59
LIME1-203ENST00000465591 NTRK3Q16288 839 aa24.96■■□□□ 1.59
LIME1-203ENST00000465591 PKN1Q16512 942 aa24.96■■□□□ 1.59
LIME1-203ENST00000465591 TRIM50Q86XT4 487 aa24.96■■□□□ 1.59
LIME1-203ENST00000465591 RPUSD2Q8IZ73 545 aaKnown RBP24.96■■□□□ 1.59
LIME1-203ENST00000465591 ZNF713Q8N859 430 aaPredicted RBP24.96■■□□□ 1.59
LIME1-203ENST00000465591 PHKBQ93100 1093 aa24.96■■□□□ 1.59
LIME1-203ENST00000465591 PBX4Q9BYU1 374 aa24.96■■□□□ 1.59
LIME1-203ENST00000465591 CCDC196A0A1B0GTZ2 297 aa24.95■■□□□ 1.58
LIME1-203ENST00000465591 H3BRB1 525 aa24.95■■□□□ 1.58
LIME1-203ENST00000465591 PDIA3P30101 505 aaKnown RBP24.95■■□□□ 1.58
LIME1-203ENST00000465591 CLK2P49760 499 aaKnown RBP24.95■■□□□ 1.58
LIME1-203ENST00000465591 TRIM71Q2Q1W2 868 aaKnown RBP24.95■■□□□ 1.58
LIME1-203ENST00000465591 RETREG2Q8NC44 543 aa24.95■■□□□ 1.58
LIME1-203ENST00000465591 CYP2W1Q8TAV3 490 aa24.95■■□□□ 1.58
LIME1-203ENST00000465591 ANO3Q9BYT9 981 aa24.95■■□□□ 1.58
LIME1-203ENST00000465591 UPF3BQ9BZI7 483 aaKnown RBP24.95■■□□□ 1.58
LIME1-203ENST00000465591 TUT1Q9H6E5 874 aaKnown RBP24.95■■□□□ 1.58
LIME1-203ENST00000465591 NCOA5Q9HCD5 579 aaKnown RBP24.95■■□□□ 1.58
LIME1-203ENST00000465591 PKD2L1Q9P0L9 805 aa24.95■■□□□ 1.58
LIME1-203ENST00000465591 SCG2P13521 617 aa24.94■■□□□ 1.58
LIME1-203ENST00000465591 CCT2P78371 535 aaKnown RBP24.94■■□□□ 1.58
LIME1-203ENST00000465591 RBL2Q08999 1139 aa24.94■■□□□ 1.58
LIME1-203ENST00000465591 CAGE1Q8TC20 777 aa24.94■■□□□ 1.58
LIME1-203ENST00000465591 CDX2Q99626 313 aaPredicted RBP24.94■■□□□ 1.58
LIME1-203ENST00000465591 LARP6Q9BRS8 491 aaKnown RBP24.94■■□□□ 1.58
LIME1-203ENST00000465591 JADE2Q9NQC1 790 aa24.94■■□□□ 1.58
LIME1-203ENST00000465591 KAT6AQ92794 2004 aa24.93■■□□□ 1.58
LIME1-203ENST00000465591 PRPF3O43395 683 aaKnown RBP24.93■■□□□ 1.58
LIME1-203ENST00000465591 HOXC8P31273 242 aa24.93■■□□□ 1.58
LIME1-203ENST00000465591 MTMR1Q13613 665 aa24.93■■□□□ 1.58
LIME1-203ENST00000465591 UTP14CQ5TAP6 766 aaKnown RBP24.93■■□□□ 1.58
LIME1-203ENST00000465591 TRAF7Q6Q0C0 670 aa24.93■■□□□ 1.58
LIME1-203ENST00000465591 AFAP1L1Q8TED9 768 aa24.93■■□□□ 1.58
LIME1-203ENST00000465591 PTPRSQ13332 1948 aa24.92■■□□□ 1.58
LIME1-203ENST00000465591 PFKMP08237 780 aa24.92■■□□□ 1.58
LIME1-203ENST00000465591 SMIM10L2AP0DMW4 78 aa24.92■■□□□ 1.58
LIME1-203ENST00000465591 SMIM10L2BP0DMW5 78 aa24.92■■□□□ 1.58
LIME1-203ENST00000465591 CKBP12277 381 aa24.92■■□□□ 1.58
LIME1-203ENST00000465591 RFC2P35250 354 aa24.92■■□□□ 1.58
LIME1-203ENST00000465591 PTK7Q13308 1070 aa24.92■■□□□ 1.58
LIME1-203ENST00000465591 TIFAQ96CG3 184 aa24.92■■□□□ 1.58
LIME1-203ENST00000465591 MXRA8Q9BRK3 442 aa24.92■■□□□ 1.58
LIME1-203ENST00000465591 TM6SF1Q9BZW5 370 aa24.92■■□□□ 1.58
LIME1-203ENST00000465591 CYP46A1Q9Y6A2 500 aa24.92■■□□□ 1.58
LIME1-203ENST00000465591 TMEM265A0A087WTH1 108 aa24.91■■□□□ 1.58
LIME1-203ENST00000465591 GSTTP1A0A1W2PQM5 241 aa24.91■■□□□ 1.58
LIME1-203ENST00000465591 ZBBXA8MT70 800 aa24.91■■□□□ 1.58
LIME1-203ENST00000465591 FOSP01100 380 aaPredicted RBP24.91■■□□□ 1.58
LIME1-203ENST00000465591 SELPP16109 830 aa24.91■■□□□ 1.58
LIME1-203ENST00000465591 JAKMIP3Q5VZ66 844 aa24.91■■□□□ 1.58
LIME1-203ENST00000465591 LRRC8DQ7L1W4 858 aa24.91■■□□□ 1.58
LIME1-203ENST00000465591 CCDC155Q8N6L0 562 aa24.91■■□□□ 1.58
LIME1-203ENST00000465591 CDHR1Q96JP9 859 aa24.91■■□□□ 1.58
LIME1-203ENST00000465591 MTIF3Q9H2K0 278 aaKnown RBP24.91■■□□□ 1.58
LIME1-203ENST00000465591 RNPEPQ9H4A4 650 aa24.91■■□□□ 1.58
LIME1-203ENST00000465591 EHMT1Q9H9B1 1298 aa24.91■■□□□ 1.58
LIME1-203ENST00000465591 CHD9Q3L8U1 2897 aa24.9■■□□□ 1.58
LIME1-203ENST00000465591 ARP10275 920 aa24.9■■□□□ 1.58
LIME1-203ENST00000465591 IFNAR1P17181 557 aa24.9■■□□□ 1.58
LIME1-203ENST00000465591 SREBF1P36956 1147 aa24.9■■□□□ 1.58
LIME1-203ENST00000465591 RABGGTBP53611 331 aa24.9■■□□□ 1.58
LIME1-203ENST00000465591 TCTN1Q2MV58 587 aa24.9■■□□□ 1.58
LIME1-203ENST00000465591 SERINC5Q86VE9 423 aa24.9■■□□□ 1.58
LIME1-203ENST00000465591 TEX2Q8IWB9 1127 aa24.9■■□□□ 1.58
LIME1-203ENST00000465591 GIMAP8Q8ND71 665 aaPredicted RBP24.9■■□□□ 1.58
LIME1-203ENST00000465591 MYLIPQ8WY64 445 aa24.9■■□□□ 1.58
LIME1-203ENST00000465591 ZMYND12Q9H0C1 365 aa24.9■■□□□ 1.58
LIME1-203ENST00000465591 KCNH7Q9NS40 1196 aa24.9■■□□□ 1.58
LIME1-203ENST00000465591 YBX2Q9Y2T7 364 aaKnown RBP24.9■■□□□ 1.58
LIME1-203ENST00000465591 SLC4A7Q9Y6M7 1214 aa24.9■■□□□ 1.58
LIME1-203ENST00000465591 ESYT2A0FGR8 921 aa24.89■■□□□ 1.58
LIME1-203ENST00000465591 C17orf102A2RUQ5 167 aa24.89■■□□□ 1.58
LIME1-203ENST00000465591 TREHO43280 583 aa24.89■■□□□ 1.58
LIME1-203ENST00000465591 NBNO60934 754 aa24.89■■□□□ 1.58
LIME1-203ENST00000465591 TCF7P36402 384 aaPredicted RBP24.89■■□□□ 1.58
LIME1-203ENST00000465591 AP3B2Q13367 1082 aa24.89■■□□□ 1.58
LIME1-203ENST00000465591 MBTPS1Q14703 1052 aa24.89■■□□□ 1.58
LIME1-203ENST00000465591 GRIN2CQ14957 1233 aa24.89■■□□□ 1.58
LIME1-203ENST00000465591 ZNF618Q5T7W0 954 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms