RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 SETQ01105 290 aaPredicted RBP23.12■■□□□ 1.29
SKA3-205ENST00000465471 NR5A1Q13285 461 aa23.12■■□□□ 1.29
SKA3-205ENST00000465471 DGKDQ16760 1214 aa23.12■■□□□ 1.29
SKA3-205ENST00000465471 EARS2Q5JPH6 523 aaKnown RBP23.12■■□□□ 1.29
SKA3-205ENST00000465471 MOXD1Q6UVY6 613 aa23.12■■□□□ 1.29
SKA3-205ENST00000465471 PLA2G4DQ86XP0 818 aa23.12■■□□□ 1.29
SKA3-205ENST00000465471 DIS3L2Q8IYB7 885 aaKnown RBP23.12■■□□□ 1.29
SKA3-205ENST00000465471 FAM184AQ8NB25 1140 aa23.12■■□□□ 1.29
SKA3-205ENST00000465471 SNX21Q969T3 373 aa23.12■■□□□ 1.29
SKA3-205ENST00000465471 MBOAT7Q96N66 472 aa23.12■■□□□ 1.29
SKA3-205ENST00000465471 MTG1Q9BT17 334 aaPredicted RBP23.12■■□□□ 1.29
SKA3-205ENST00000465471 CCDC194A0A1B0GVG4 234 aa23.11■■□□□ 1.29
SKA3-205ENST00000465471 BTBD18B2RXH4 712 aa23.11■■□□□ 1.29
SKA3-205ENST00000465471 SORBS3O60504 671 aa23.11■■□□□ 1.29
SKA3-205ENST00000465471 PPFIA4O75335 1185 aa23.11■■□□□ 1.29
SKA3-205ENST00000465471 FOSBP53539 338 aa23.11■■□□□ 1.29
SKA3-205ENST00000465471 ITGB3BPQ13352 177 aaPredicted RBP23.11■■□□□ 1.29
SKA3-205ENST00000465471 INF2Q27J81 1249 aa23.11■■□□□ 1.29
SKA3-205ENST00000465471 DPF3Q92784 378 aa23.11■■□□□ 1.29
SKA3-205ENST00000465471 KAT2BQ92831 832 aa23.11■■□□□ 1.29
SKA3-205ENST00000465471 GPR20Q99678 358 aa23.11■■□□□ 1.29
SKA3-205ENST00000465471 TELO2Q9Y4R8 837 aa23.11■■□□□ 1.29
SKA3-205ENST00000465471 EVI5O60447 810 aa23.1■■□□□ 1.29
SKA3-205ENST00000465471 TRIM60Q495X7 471 aa23.1■■□□□ 1.29
SKA3-205ENST00000465471 PIK3AP1Q6ZUJ8 805 aa23.1■■□□□ 1.29
SKA3-205ENST00000465471 ANKRD33Q7Z3H0 272 aa23.1■■□□□ 1.29
SKA3-205ENST00000465471 SEZ6LQ9BYH1 1024 aa23.1■■□□□ 1.29
SKA3-205ENST00000465471 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.1■■□□□ 1.29
SKA3-205ENST00000465471 FAM205CA6NFA0 338 aa23.09■■□□□ 1.29
SKA3-205ENST00000465471 ARVCFO00192 962 aa23.09■■□□□ 1.29
SKA3-205ENST00000465471 DHX15O43143 795 aaKnown RBP23.09■■□□□ 1.29
SKA3-205ENST00000465471 F2P00734 622 aa23.09■■□□□ 1.29
SKA3-205ENST00000465471 GJB2P29033 226 aa23.09■■□□□ 1.29
SKA3-205ENST00000465471 PSMC6P62333 389 aa23.09■■□□□ 1.29
SKA3-205ENST00000465471 GUCY1B3Q02153 619 aa23.09■■□□□ 1.29
SKA3-205ENST00000465471 ITGA7Q13683 1181 aa23.09■■□□□ 1.29
SKA3-205ENST00000465471 Q4G0T1 1027 aa23.09■■□□□ 1.29
SKA3-205ENST00000465471 PRR16Q569H4 304 aa23.09■■□□□ 1.29
SKA3-205ENST00000465471 TOX2Q96NM4 488 aa23.09■■□□□ 1.29
SKA3-205ENST00000465471 PKD2L1Q9P0L9 805 aa23.09■■□□□ 1.29
SKA3-205ENST00000465471 KIF3AQ9Y496 699 aa23.09■■□□□ 1.29
SKA3-205ENST00000465471 K7ELQ4 463 aaPredicted RBP23.08■■□□□ 1.29
SKA3-205ENST00000465471 HAS3O00219 553 aa23.08■■□□□ 1.29
SKA3-205ENST00000465471 TDP2O95551 362 aa23.08■■□□□ 1.29
SKA3-205ENST00000465471 NEK8Q86SG6 692 aa23.08■■□□□ 1.29
SKA3-205ENST00000465471 C7orf61Q8IZ16 206 aa23.08■■□□□ 1.29
SKA3-205ENST00000465471 C16orf70Q9BSU1 422 aa23.08■■□□□ 1.29
SKA3-205ENST00000465471 JPH1Q9HDC5 661 aaPredicted RBP23.08■■□□□ 1.29
SKA3-205ENST00000465471 ATP11BQ9Y2G3 1177 aa23.08■■□□□ 1.29
SKA3-205ENST00000465471 MROH7Q68CQ1 1323 aa23.08■■□□□ 1.28
SKA3-205ENST00000465471 CEP290O15078 2479 aa23.07■■□□□ 1.28
SKA3-205ENST00000465471 IPO5O00410 1097 aaKnown RBP23.07■■□□□ 1.28
SKA3-205ENST00000465471 NOP56O00567 594 aaKnown RBP23.07■■□□□ 1.28
SKA3-205ENST00000465471 LGALS2P05162 132 aa23.07■■□□□ 1.28
SKA3-205ENST00000465471 ZNF286BP0CG31 522 aa23.07■■□□□ 1.28
SKA3-205ENST00000465471 TLE2Q04725 743 aa23.07■■□□□ 1.28
SKA3-205ENST00000465471 SAFBQ15424 915 aaKnown RBP eCLIP23.07■■□□□ 1.28
SKA3-205ENST00000465471 PPP4R3AQ6IN85 833 aa23.07■■□□□ 1.28
SKA3-205ENST00000465471 VTI1AQ96AJ9 217 aa23.07■■□□□ 1.28
SKA3-205ENST00000465471 FOXP1Q9H334 677 aaPredicted RBP23.07■■□□□ 1.28
SKA3-205ENST00000465471 SLC9A2Q9UBY0 812 aa23.07■■□□□ 1.28
SKA3-205ENST00000465471 SMC3Q9UQE7 1217 aa23.07■■□□□ 1.28
SKA3-205ENST00000465471 GSTTP1A0A1W2PQM5 241 aa23.06■■□□□ 1.28
SKA3-205ENST00000465471 MSH4O15457 936 aa23.06■■□□□ 1.28
SKA3-205ENST00000465471 GCFC2P16383 781 aaKnown RBP23.06■■□□□ 1.28
SKA3-205ENST00000465471 NFRKBQ6P4R8 1299 aa23.06■■□□□ 1.28
SKA3-205ENST00000465471 FAM126BQ8IXS8 530 aa23.06■■□□□ 1.28
SKA3-205ENST00000465471 INTS4Q96HW7 963 aaKnown RBP23.06■■□□□ 1.28
SKA3-205ENST00000465471 SDF4Q9BRK5 362 aa23.06■■□□□ 1.28
SKA3-205ENST00000465471 ZNF577Q9BSK1 485 aa23.06■■□□□ 1.28
SKA3-205ENST00000465471 NR2E3Q9Y5X4 410 aa23.06■■□□□ 1.28
SKA3-205ENST00000465471 LTBP2Q14767 1821 aa23.05■■□□□ 1.28
SKA3-205ENST00000465471 LETM2Q2VYF4 491 aa23.05■■□□□ 1.28
SKA3-205ENST00000465471 NBPF20Q3BBV1 942 aa23.05■■□□□ 1.28
SKA3-205ENST00000465471 SESTD1Q86VW0 696 aa23.05■■□□□ 1.28
SKA3-205ENST00000465471 ETNPPLQ8TBG4 499 aa23.05■■□□□ 1.28
SKA3-205ENST00000465471 SEPT1Q8WYJ6 367 aa23.05■■□□□ 1.28
SKA3-205ENST00000465471 SLC5A5Q92911 643 aa23.05■■□□□ 1.28
SKA3-205ENST00000465471 NAP1L4Q99733 375 aaKnown RBP23.05■■□□□ 1.28
SKA3-205ENST00000465471 KATNAL1Q9BW62 490 aa23.05■■□□□ 1.28
SKA3-205ENST00000465471 PDLIM7Q9NR12 457 aa23.05■■□□□ 1.28
SKA3-205ENST00000465471 TBC1D22BQ9NU19 505 aa23.05■■□□□ 1.28
SKA3-205ENST00000465471 SLC37A4O43826 429 aa23.04■■□□□ 1.28
SKA3-205ENST00000465471 PQBP1O60828 265 aaKnown RBP23.04■■□□□ 1.28
SKA3-205ENST00000465471 ATG7O95352 703 aa23.04■■□□□ 1.28
SKA3-205ENST00000465471 CCNE2O96020 404 aa23.04■■□□□ 1.28
SKA3-205ENST00000465471 CD4P01730 458 aa23.04■■□□□ 1.28
SKA3-205ENST00000465471 U2AF2P26368 475 aaKnown RBP eCLIP23.04■■□□□ 1.28
SKA3-205ENST00000465471 TCF7P36402 384 aaPredicted RBP23.04■■□□□ 1.28
SKA3-205ENST00000465471 PSEN2P49810 448 aa23.04■■□□□ 1.28
SKA3-205ENST00000465471 SP4Q02446 784 aa23.04■■□□□ 1.28
SKA3-205ENST00000465471 PTPN11Q06124 597 aaPredicted RBP23.04■■□□□ 1.28
SKA3-205ENST00000465471 FAAP100Q0VG06 881 aa23.04■■□□□ 1.28
SKA3-205ENST00000465471 MFSD10Q14728 455 aa23.04■■□□□ 1.28
SKA3-205ENST00000465471 DDX25Q9UHL0 483 aaKnown RBP23.04■■□□□ 1.28
SKA3-205ENST00000465471 EMSYQ7Z589 1322 aa23.04■■□□□ 1.28
SKA3-205ENST00000465471 KIF28PB7ZC32 967 aa23.03■■□□□ 1.28
SKA3-205ENST00000465471 ACTR2P61160 394 aa23.03■■□□□ 1.28
SKA3-205ENST00000465471 RIT2Q99578 217 aa23.03■■□□□ 1.28
SKA3-205ENST00000465471 KCNMB3Q9NPA1 279 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms