RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-208ENST00000465245 H3BRB1 525 aa14.01□□□□□ -0.17
TRA2B-208ENST00000465245 TREHO43280 583 aa14.01□□□□□ -0.17
TRA2B-208ENST00000465245 NCK2O43639 380 aa14.01□□□□□ -0.17
TRA2B-208ENST00000465245 UBA1P22314 1058 aaKnown RBP14.01□□□□□ -0.17
TRA2B-208ENST00000465245 LTBRP36941 435 aa14.01□□□□□ -0.17
TRA2B-208ENST00000465245 HSD17B4P51659 736 aa14.01□□□□□ -0.17
TRA2B-208ENST00000465245 NMIQ13287 307 aaPredicted RBP14.01□□□□□ -0.17
TRA2B-208ENST00000465245 ANKS1AQ92625 1134 aa14.01□□□□□ -0.17
TRA2B-208ENST00000465245 PDCD2LQ9BRP1 358 aa14.01□□□□□ -0.17
TRA2B-208ENST00000465245 TUT1Q9H6E5 874 aaKnown RBP14.01□□□□□ -0.17
TRA2B-208ENST00000465245 JMJD4Q9H9V9 463 aa14.01□□□□□ -0.17
TRA2B-208ENST00000465245 MUTYHQ9UIF7 546 aa14.01□□□□□ -0.17
TRA2B-208ENST00000465245 PCDHB15Q9Y5E8 787 aa14.01□□□□□ -0.17
TRA2B-208ENST00000465245 KIAA1671Q9BY89 1806 aa14.01□□□□□ -0.17
TRA2B-208ENST00000465245 OPLAHO14841 1288 aa14□□□□□ -0.17
TRA2B-208ENST00000465245 CAND2O75155 1236 aa14□□□□□ -0.17
TRA2B-208ENST00000465245 SMIM10L2AP0DMW4 78 aa14□□□□□ -0.17
TRA2B-208ENST00000465245 SMIM10L2BP0DMW5 78 aa14□□□□□ -0.17
TRA2B-208ENST00000465245 HOXC8P31273 242 aa14□□□□□ -0.17
TRA2B-208ENST00000465245 SP2Q02086 613 aa14□□□□□ -0.17
TRA2B-208ENST00000465245 PGM5Q15124 567 aa14□□□□□ -0.17
TRA2B-208ENST00000465245 SMAD2Q15796 467 aaKnown RBP14□□□□□ -0.17
TRA2B-208ENST00000465245 CCDC178Q5BJE1 867 aa14□□□□□ -0.17
TRA2B-208ENST00000465245 FIBCD1Q8N539 461 aa14□□□□□ -0.17
TRA2B-208ENST00000465245 APBB2Q92870 758 aa14□□□□□ -0.17
TRA2B-208ENST00000465245 AMNQ9BXJ7 453 aa14□□□□□ -0.17
TRA2B-208ENST00000465245 OSBPL7Q9BZF2 842 aa14□□□□□ -0.17
TRA2B-208ENST00000465245 MLXIPQ9HAP2 919 aa14□□□□□ -0.17
TRA2B-208ENST00000465245 TRIM6-TRIM34B2RNG4 842 aa13.99□□□□□ -0.17
TRA2B-208ENST00000465245 C5orf67F2Z3F1 127 aa13.99□□□□□ -0.17
TRA2B-208ENST00000465245 ZNF213O14771 459 aa13.99□□□□□ -0.17
TRA2B-208ENST00000465245 MBTPS2O43462 519 aa13.99□□□□□ -0.17
TRA2B-208ENST00000465245 KDM4AO75164 1064 aa13.99□□□□□ -0.17
TRA2B-208ENST00000465245 CSPG5O95196 566 aa13.99□□□□□ -0.17
TRA2B-208ENST00000465245 LGALS2P05162 132 aa13.99□□□□□ -0.17
TRA2B-208ENST00000465245 PARP1P09874 1014 aaKnown RBP13.99□□□□□ -0.17
TRA2B-208ENST00000465245 TGFB3P10600 412 aa13.99□□□□□ -0.17
TRA2B-208ENST00000465245 GHRHRQ02643 423 aa13.99□□□□□ -0.17
TRA2B-208ENST00000465245 DLX2Q07687 328 aaPredicted RBP13.99□□□□□ -0.17
TRA2B-208ENST00000465245 HYAL1Q12794 435 aa13.99□□□□□ -0.17
TRA2B-208ENST00000465245 CTC1Q2NKJ3 1217 aa13.99□□□□□ -0.17
TRA2B-208ENST00000465245 HERC4Q5GLZ8 1057 aaPredicted RBP13.99□□□□□ -0.17
TRA2B-208ENST00000465245 IL31RAQ8NI17 732 aa13.99□□□□□ -0.17
TRA2B-208ENST00000465245 IL17RAQ96F46 866 aa13.99□□□□□ -0.17
TRA2B-208ENST00000465245 SNX27Q96L92 541 aa13.99□□□□□ -0.17
TRA2B-208ENST00000465245 C11orf84Q9BUA3 381 aaPredicted RBP13.99□□□□□ -0.17
TRA2B-208ENST00000465245 LMAN2LQ9H0V9 348 aa13.99□□□□□ -0.17
TRA2B-208ENST00000465245 RNPEPQ9H4A4 650 aa13.99□□□□□ -0.17
TRA2B-208ENST00000465245 ADGRA3Q8IWK6 1321 aa13.98□□□□□ -0.17
TRA2B-208ENST00000465245 KMT2EQ8IZD2 1858 aa13.98□□□□□ -0.17
TRA2B-208ENST00000465245 NOP56O00567 594 aaKnown RBP13.98□□□□□ -0.17
TRA2B-208ENST00000465245 GRM6O15303 877 aa13.98□□□□□ -0.17
TRA2B-208ENST00000465245 RB1P06400 928 aa13.98□□□□□ -0.17
TRA2B-208ENST00000465245 GNAT1P11488 350 aa13.98□□□□□ -0.17
TRA2B-208ENST00000465245 CCND2P30279 289 aa13.98□□□□□ -0.17
TRA2B-208ENST00000465245 HOXA13P31271 388 aaPredicted RBP13.98□□□□□ -0.17
TRA2B-208ENST00000465245 NT5C2P49902 561 aa13.98□□□□□ -0.17
TRA2B-208ENST00000465245 PDE1AP54750 535 aa13.98□□□□□ -0.17
TRA2B-208ENST00000465245 MFAP1P55081 439 aaKnown RBP13.98□□□□□ -0.17
TRA2B-208ENST00000465245 ANKRD45Q5TZF3 282 aa13.98□□□□□ -0.17
TRA2B-208ENST00000465245 STOX1Q6ZVD7 989 aa13.98□□□□□ -0.17
TRA2B-208ENST00000465245 VSIG10LQ86VR7 867 aa13.98□□□□□ -0.17
TRA2B-208ENST00000465245 POTEDQ86YR6 584 aa13.98□□□□□ -0.17
TRA2B-208ENST00000465245 RNF135Q8IUD6 432 aa13.98□□□□□ -0.17
TRA2B-208ENST00000465245 ENAHQ8N8S7 591 aaPredicted RBP13.98□□□□□ -0.17
TRA2B-208ENST00000465245 GPKOWQ92917 476 aaPredicted RBP eCLIP13.98□□□□□ -0.17
TRA2B-208ENST00000465245 ZFP91Q96JP5 570 aaPredicted RBP13.98□□□□□ -0.17
TRA2B-208ENST00000465245 ZSCAN10Q96SZ4 725 aaPredicted RBP13.98□□□□□ -0.17
TRA2B-208ENST00000465245 MAP3K20Q9NYL2 800 aaKnown RBP13.98□□□□□ -0.17
TRA2B-208ENST00000465245 RWDD3Q9Y3V2 267 aa13.98□□□□□ -0.17
TRA2B-208ENST00000465245 BAZ2BQ9UIF8 2168 aaKnown RBP13.98□□□□□ -0.17
TRA2B-208ENST00000465245 TTC3P53804 2025 aa13.97□□□□□ -0.17
TRA2B-208ENST00000465245 B4E1Z4 1266 aa13.97□□□□□ -0.17
TRA2B-208ENST00000465245 STXBP3O00186 592 aa13.97□□□□□ -0.17
TRA2B-208ENST00000465245 TBX10O75333 385 aa13.97□□□□□ -0.17
TRA2B-208ENST00000465245 BMPR1AP36894 532 aa13.97□□□□□ -0.17
TRA2B-208ENST00000465245 SMAD4Q13485 552 aaKnown RBP13.97□□□□□ -0.17
TRA2B-208ENST00000465245 TICAM2Q86XR7 235 aa13.97□□□□□ -0.17
TRA2B-208ENST00000465245 PHOX2BQ99453 314 aa13.97□□□□□ -0.17
TRA2B-208ENST00000465245 IGFLR1Q9H665 355 aa13.97□□□□□ -0.17
TRA2B-208ENST00000465245 SETD4Q9NVD3 440 aa13.97□□□□□ -0.17
TRA2B-208ENST00000465245 PCDHA1Q9Y5I3 950 aa13.97□□□□□ -0.17
TRA2B-208ENST00000465245 PPP1R11O60927 126 aaPredicted RBP13.96□□□□□ -0.17
TRA2B-208ENST00000465245 LINC00271P0C7V0 271 aa13.96□□□□□ -0.17
TRA2B-208ENST00000465245 GTF2F1P35269 517 aaKnown RBP eCLIP13.96□□□□□ -0.17
TRA2B-208ENST00000465245 STAG2Q8N3U4 1231 aa13.96□□□□□ -0.17
TRA2B-208ENST00000465245 PRSS33Q8NF86 280 aa13.96□□□□□ -0.17
TRA2B-208ENST00000465245 EDAQ92838 391 aa13.96□□□□□ -0.17
TRA2B-208ENST00000465245 USP26Q9BXU7 913 aa13.96□□□□□ -0.17
TRA2B-208ENST00000465245 BCAS3Q9H6U6 928 aa13.96□□□□□ -0.17
TRA2B-208ENST00000465245 CD207Q9UJ71 328 aa13.96□□□□□ -0.17
TRA2B-208ENST00000465245 ZNF215Q9UL58 517 aaPredicted RBP13.96□□□□□ -0.17
TRA2B-208ENST00000465245 LOXHD1Q8IVV2 1947 aa13.96□□□□□ -0.18
TRA2B-208ENST00000465245 ZDBF2Q9HCK1 2354 aa13.95□□□□□ -0.18
TRA2B-208ENST00000465245 MYO15AQ9UKN7 3530 aa13.95□□□□□ -0.18
TRA2B-208ENST00000465245 ZBTB5O15062 677 aa13.95□□□□□ -0.18
TRA2B-208ENST00000465245 LINC01565O15544 149 aa13.95□□□□□ -0.18
TRA2B-208ENST00000465245 MMP1P03956 469 aa13.95□□□□□ -0.18
TRA2B-208ENST00000465245 NDUFV1P49821 464 aa13.95□□□□□ -0.18
TRA2B-208ENST00000465245 PTPN5P54829 565 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms