RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 FAM20AQ96MK3 541 aa19.1■□□□□ 0.65
EXOSC3-203ENST00000465229 AGO4Q9HCK5 861 aaKnown RBP19.1■□□□□ 0.65
EXOSC3-203ENST00000465229 MORC2Q9Y6X9 1032 aaPredicted RBP19.1■□□□□ 0.65
EXOSC3-203ENST00000465229 CASP8AP2Q9UKL3 1982 aa19.09■□□□□ 0.65
EXOSC3-203ENST00000465229 IPO5O00410 1097 aaKnown RBP19.09■□□□□ 0.65
EXOSC3-203ENST00000465229 CCDC192P0DO97 292 aa19.09■□□□□ 0.65
EXOSC3-203ENST00000465229 IL17AQ16552 155 aa19.09■□□□□ 0.65
EXOSC3-203ENST00000465229 SLC5A5Q92911 643 aa19.09■□□□□ 0.65
EXOSC3-203ENST00000465229 ZNF577Q9BSK1 485 aa19.09■□□□□ 0.65
EXOSC3-203ENST00000465229 RBM47A0AV96 593 aaKnown RBP19.08■□□□□ 0.65
EXOSC3-203ENST00000465229 CTAGE5O15320 804 aa19.08■□□□□ 0.65
EXOSC3-203ENST00000465229 ZNF865P0CJ78 1059 aaPredicted RBP19.08■□□□□ 0.65
EXOSC3-203ENST00000465229 TGFB3P10600 412 aa19.08■□□□□ 0.65
EXOSC3-203ENST00000465229 PRPHP41219 470 aa19.08■□□□□ 0.65
EXOSC3-203ENST00000465229 TXKP42681 527 aa19.08■□□□□ 0.65
EXOSC3-203ENST00000465229 SP2Q02086 613 aa19.08■□□□□ 0.65
EXOSC3-203ENST00000465229 MFSD14CQ5VZR4 134 aa19.08■□□□□ 0.65
EXOSC3-203ENST00000465229 ARL6IP4Q66PJ3 421 aaKnown RBP19.08■□□□□ 0.65
EXOSC3-203ENST00000465229 CCDC62Q6P9F0 684 aa19.08■□□□□ 0.65
EXOSC3-203ENST00000465229 PXYLP1Q8TE99 480 aa19.08■□□□□ 0.65
EXOSC3-203ENST00000465229 TNMDQ9H2S6 317 aa19.08■□□□□ 0.65
EXOSC3-203ENST00000465229 PKD2L1Q9P0L9 805 aa19.08■□□□□ 0.65
EXOSC3-203ENST00000465229 DHX15O43143 795 aaKnown RBP19.07■□□□□ 0.64
EXOSC3-203ENST00000465229 MARCH6O60337 910 aa19.07■□□□□ 0.64
EXOSC3-203ENST00000465229 PPP6R2O75170 966 aa19.07■□□□□ 0.64
EXOSC3-203ENST00000465229 NR1I2O75469 434 aa19.07■□□□□ 0.64
EXOSC3-203ENST00000465229 ARIH2O95376 493 aa19.07■□□□□ 0.64
EXOSC3-203ENST00000465229 KCNA2P16389 499 aa19.07■□□□□ 0.64
EXOSC3-203ENST00000465229 ME1P48163 572 aa19.07■□□□□ 0.64
EXOSC3-203ENST00000465229 TRIM32Q13049 653 aa19.07■□□□□ 0.64
EXOSC3-203ENST00000465229 ITGB3BPQ13352 177 aaPredicted RBP19.07■□□□□ 0.64
EXOSC3-203ENST00000465229 KCNV1Q6PIU1 500 aa19.07■□□□□ 0.64
EXOSC3-203ENST00000465229 SLFN12Q8IYM2 578 aa19.07■□□□□ 0.64
EXOSC3-203ENST00000465229 SCFD2Q8WU76 684 aa19.07■□□□□ 0.64
EXOSC3-203ENST00000465229 DDX41Q9UJV9 622 aaKnown RBP19.07■□□□□ 0.64
EXOSC3-203ENST00000465229 FBXO2Q9UK22 296 aaPredicted RBP19.07■□□□□ 0.64
EXOSC3-203ENST00000465229 ZHX1Q9UKY1 873 aaPredicted RBP19.07■□□□□ 0.64
EXOSC3-203ENST00000465229 PTPN22Q9Y2R2 807 aa19.07■□□□□ 0.64
EXOSC3-203ENST00000465229 SRPRBQ9Y5M8 271 aaKnown RBP19.07■□□□□ 0.64
EXOSC3-203ENST00000465229 PTCH2Q9Y6C5 1203 aa19.07■□□□□ 0.64
EXOSC3-203ENST00000465229 PSMD10O75832 226 aa19.07■□□□□ 0.64
EXOSC3-203ENST00000465229 FAM160A1Q05DH4 1040 aa19.07■□□□□ 0.64
EXOSC3-203ENST00000465229 TPRNQ4KMQ1 711 aa19.07■□□□□ 0.64
EXOSC3-203ENST00000465229 TMEM63BQ5T3F8 832 aa19.07■□□□□ 0.64
EXOSC3-203ENST00000465229 DTHD1Q6ZMT9 781 aa19.07■□□□□ 0.64
EXOSC3-203ENST00000465229 CCDC73Q6ZRK6 1079 aa19.07■□□□□ 0.64
EXOSC3-203ENST00000465229 RIT2Q99578 217 aa19.07■□□□□ 0.64
EXOSC3-203ENST00000465229 SENP7Q9BQF6 1050 aa19.07■□□□□ 0.64
EXOSC3-203ENST00000465229 BCAS3Q9H6U6 928 aa19.07■□□□□ 0.64
EXOSC3-203ENST00000465229 TTC12Q9H892 705 aaPredicted RBP19.07■□□□□ 0.64
EXOSC3-203ENST00000465229 PCDHA7Q9UN72 937 aa19.07■□□□□ 0.64
EXOSC3-203ENST00000465229 PCDHA12Q9UN75 941 aa19.07■□□□□ 0.64
EXOSC3-203ENST00000465229 ADCYAP1R1P41586 468 aa19.06■□□□□ 0.64
EXOSC3-203ENST00000465229 GRIN1Q05586 938 aa19.06■□□□□ 0.64
EXOSC3-203ENST00000465229 CACNB2Q08289 660 aaPredicted RBP19.06■□□□□ 0.64
EXOSC3-203ENST00000465229 TTLL4Q14679 1199 aa19.06■□□□□ 0.64
EXOSC3-203ENST00000465229 LY6KQ17RY6 165 aa19.06■□□□□ 0.64
EXOSC3-203ENST00000465229 CCDC144BQ3MJ40 725 aa19.06■□□□□ 0.64
EXOSC3-203ENST00000465229 LRCH2Q5VUJ6 765 aa19.06■□□□□ 0.64
EXOSC3-203ENST00000465229 TRPV1Q8NER1 839 aa19.06■□□□□ 0.64
EXOSC3-203ENST00000465229 ENGASEQ8NFI3 743 aa19.06■□□□□ 0.64
EXOSC3-203ENST00000465229 FERMT2Q96AC1 680 aa19.06■□□□□ 0.64
EXOSC3-203ENST00000465229 CLIC6Q96NY7 704 aa19.06■□□□□ 0.64
EXOSC3-203ENST00000465229 NRBP1Q9UHY1 535 aa19.06■□□□□ 0.64
EXOSC3-203ENST00000465229 LRRC37A2A6NM11 1700 aa19.06■□□□□ 0.64
EXOSC3-203ENST00000465229 VWA3AA6NCI4 1184 aa19.05■□□□□ 0.64
EXOSC3-203ENST00000465229 HMGCRP04035 888 aa19.05■□□□□ 0.64
EXOSC3-203ENST00000465229 TXNP10599 105 aaKnown RBP19.05■□□□□ 0.64
EXOSC3-203ENST00000465229 UBA1P22314 1058 aaKnown RBP19.05■□□□□ 0.64
EXOSC3-203ENST00000465229 TECP42680 631 aa19.05■□□□□ 0.64
EXOSC3-203ENST00000465229 IQSEC1Q6DN90 963 aa19.05■□□□□ 0.64
EXOSC3-203ENST00000465229 KRI1Q8N9T8 703 aaKnown RBP19.05■□□□□ 0.64
EXOSC3-203ENST00000465229 SLAIN1Q8ND83 568 aa19.05■□□□□ 0.64
EXOSC3-203ENST00000465229 MRPS27Q92552 414 aaKnown RBP19.05■□□□□ 0.64
EXOSC3-203ENST00000465229 TBC1D22BQ9NU19 505 aa19.05■□□□□ 0.64
EXOSC3-203ENST00000465229 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.04■□□□□ 0.64
EXOSC3-203ENST00000465229 GAS7O60861 476 aa19.04■□□□□ 0.64
EXOSC3-203ENST00000465229 CYBAP13498 195 aa19.04■□□□□ 0.64
EXOSC3-203ENST00000465229 GRK4P32298 578 aa19.04■□□□□ 0.64
EXOSC3-203ENST00000465229 FXR2P51116 673 aaKnown RBP eCLIP19.04■□□□□ 0.64
EXOSC3-203ENST00000465229 SPIRE1Q08AE8 756 aa19.04■□□□□ 0.64
EXOSC3-203ENST00000465229 SNW1Q13573 536 aaKnown RBP19.04■□□□□ 0.64
EXOSC3-203ENST00000465229 HS1BP3Q53T59 392 aa19.04■□□□□ 0.64
EXOSC3-203ENST00000465229 AXDND1Q5T1B0 1012 aaPredicted RBP19.04■□□□□ 0.64
EXOSC3-203ENST00000465229 CTU1Q7Z7A3 348 aaKnown RBP19.04■□□□□ 0.64
EXOSC3-203ENST00000465229 RNF214Q8ND24 703 aa19.04■□□□□ 0.64
EXOSC3-203ENST00000465229 VAV3Q9UKW4 847 aa19.04■□□□□ 0.64
EXOSC3-203ENST00000465229 CAVIN2O95810 425 aa19.03■□□□□ 0.64
EXOSC3-203ENST00000465229 PRKAR2AP13861 404 aaKnown RBP19.03■□□□□ 0.64
EXOSC3-203ENST00000465229 SMPD1P17405 629 aa19.03■□□□□ 0.64
EXOSC3-203ENST00000465229 NEDD9Q14511 834 aa19.03■□□□□ 0.64
EXOSC3-203ENST00000465229 MAP3K21Q5TCX8 1036 aa19.03■□□□□ 0.64
EXOSC3-203ENST00000465229 B3GNT9Q6UX72 402 aa19.03■□□□□ 0.64
EXOSC3-203ENST00000465229 FSIP1Q8NA03 581 aa19.03■□□□□ 0.64
EXOSC3-203ENST00000465229 COPS5Q92905 334 aa19.03■□□□□ 0.64
EXOSC3-203ENST00000465229 TRIM44Q96DX7 344 aaPredicted RBP19.03■□□□□ 0.64
EXOSC3-203ENST00000465229 TEKT3Q9BXF9 490 aa19.03■□□□□ 0.64
EXOSC3-203ENST00000465229 NFASCO94856 1347 aa19.03■□□□□ 0.64
EXOSC3-203ENST00000465229 KIAA1217Q5T5P2 1943 aa19.03■□□□□ 0.64
EXOSC3-203ENST00000465229 DDX39AO00148 427 aaKnown RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms