RNA–Protein interactions for RNA: ENST00000465223.1

NCSTN-210, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-210ENST00000465223 GVINP1Q7Z2Y8 2422 aa17.77■□□□□ 0.44
NCSTN-210ENST00000465223 M0R2C6 588 aa17.77■□□□□ 0.44
NCSTN-210ENST00000465223 TREHO43280 583 aa17.77■□□□□ 0.44
NCSTN-210ENST00000465223 ITGB1P05556 798 aa17.77■□□□□ 0.44
NCSTN-210ENST00000465223 BTG3Q14201 252 aaPredicted RBP17.77■□□□□ 0.44
NCSTN-210ENST00000465223 MCTP2Q6DN12 878 aa17.77■□□□□ 0.44
NCSTN-210ENST00000465223 SPPL3Q8TCT6 385 aa17.77■□□□□ 0.44
NCSTN-210ENST00000465223 SUSD6Q92537 303 aa17.77■□□□□ 0.44
NCSTN-210ENST00000465223 TBC1D5Q92609 795 aa17.77■□□□□ 0.44
NCSTN-210ENST00000465223 ATP6V0A1Q93050 837 aa17.77■□□□□ 0.44
NCSTN-210ENST00000465223 TAAR1Q96RJ0 339 aa17.77■□□□□ 0.44
NCSTN-210ENST00000465223 MYO10Q9HD67 2058 aa17.76■□□□□ 0.43
NCSTN-210ENST00000465223 PLXNA4Q9HCM2 1894 aa17.76■□□□□ 0.43
NCSTN-210ENST00000465223 ATF7P17544 494 aaPredicted RBP17.76■□□□□ 0.43
NCSTN-210ENST00000465223 PPTC7Q8NI37 304 aa17.76■□□□□ 0.43
NCSTN-210ENST00000465223 APPBP2Q92624 585 aa17.76■□□□□ 0.43
NCSTN-210ENST00000465223 EMID1Q96A84 441 aaPredicted RBP17.76■□□□□ 0.43
NCSTN-210ENST00000465223 PLVAPQ9BX97 442 aa17.76■□□□□ 0.43
NCSTN-210ENST00000465223 VPS13AQ96RL7 3174 aa17.76■□□□□ 0.43
NCSTN-210ENST00000465223 C17orf102A2RUQ5 167 aa17.75■□□□□ 0.43
NCSTN-210ENST00000465223 TSPY2A6NKD2 308 aa17.75■□□□□ 0.43
NCSTN-210ENST00000465223 PPARAQ07869 468 aa17.75■□□□□ 0.43
NCSTN-210ENST00000465223 LAMC2Q13753 1193 aa17.75■□□□□ 0.43
NCSTN-210ENST00000465223 USH1GQ495M9 461 aa17.75■□□□□ 0.43
NCSTN-210ENST00000465223 FTSJ3Q8IY81 847 aaKnown RBP17.75■□□□□ 0.43
NCSTN-210ENST00000465223 KREMEN2Q8NCW0 462 aa17.75■□□□□ 0.43
NCSTN-210ENST00000465223 POF1BQ8WVV4 589 aa17.75■□□□□ 0.43
NCSTN-210ENST00000465223 APBB2Q92870 758 aa17.75■□□□□ 0.43
NCSTN-210ENST00000465223 ZNF689Q96CS4 500 aaPredicted RBP17.75■□□□□ 0.43
NCSTN-210ENST00000465223 SMOC2Q9H3U7 446 aa17.75■□□□□ 0.43
NCSTN-210ENST00000465223 COL20A1Q9P218 1284 aa17.75■□□□□ 0.43
NCSTN-210ENST00000465223 KMT2BQ9UMN6 2715 aaPredicted RBP17.75■□□□□ 0.43
NCSTN-210ENST00000465223 PATL2C9JE40 543 aaKnown RBP17.74■□□□□ 0.43
NCSTN-210ENST00000465223 PER2O15055 1255 aa17.74■□□□□ 0.43
NCSTN-210ENST00000465223 KLHL23Q8NBE8 558 aa17.74■□□□□ 0.43
NCSTN-210ENST00000465223 VN1R2Q8NFZ6 395 aa17.74■□□□□ 0.43
NCSTN-210ENST00000465223 P2RX5Q93086 422 aa17.74■□□□□ 0.43
NCSTN-210ENST00000465223 MRVI1Q9Y6F6 885 aa17.74■□□□□ 0.43
NCSTN-210ENST00000465223 MRPL42Q9Y6G3 142 aaKnown RBP17.74■□□□□ 0.43
NCSTN-210ENST00000465223 BRD1O95696 1058 aa17.73■□□□□ 0.43
NCSTN-210ENST00000465223 ARP10275 920 aa17.73■□□□□ 0.43
NCSTN-210ENST00000465223 HOXD8P13378 290 aaPredicted RBP17.73■□□□□ 0.43
NCSTN-210ENST00000465223 GNAT2P19087 354 aa17.73■□□□□ 0.43
NCSTN-210ENST00000465223 STXBP2Q15833 593 aa17.73■□□□□ 0.43
NCSTN-210ENST00000465223 HSDL1Q3SXM5 330 aa17.73■□□□□ 0.43
NCSTN-210ENST00000465223 PPP4R3BQ5MIZ7 849 aa17.73■□□□□ 0.43
NCSTN-210ENST00000465223 ASTLQ6HA08 431 aaPredicted RBP17.73■□□□□ 0.43
NCSTN-210ENST00000465223 KIAA2013Q8IYS2 634 aa17.73■□□□□ 0.43
NCSTN-210ENST00000465223 C16orf70Q9BSU1 422 aa17.73■□□□□ 0.43
NCSTN-210ENST00000465223 TLE6Q9H808 572 aa17.73■□□□□ 0.43
NCSTN-210ENST00000465223 SLC3A2P08195 630 aaKnown RBP17.72■□□□□ 0.43
NCSTN-210ENST00000465223 SMIM10L2AP0DMW4 78 aa17.72■□□□□ 0.43
NCSTN-210ENST00000465223 SMIM10L2BP0DMW5 78 aa17.72■□□□□ 0.43
NCSTN-210ENST00000465223 HOXC8P31273 242 aa17.72■□□□□ 0.43
NCSTN-210ENST00000465223 CTDSPL2Q05D32 466 aa17.72■□□□□ 0.43
NCSTN-210ENST00000465223 POTEDQ86YR6 584 aa17.72■□□□□ 0.43
NCSTN-210ENST00000465223 SYTL5Q8TDW5 730 aaPredicted RBP17.72■□□□□ 0.43
NCSTN-210ENST00000465223 ATP8B4Q8TF62 1192 aa17.72■□□□□ 0.43
NCSTN-210ENST00000465223 APOL5Q9BWW9 433 aa17.72■□□□□ 0.43
NCSTN-210ENST00000465223 RNPEPQ9H4A4 650 aa17.72■□□□□ 0.43
NCSTN-210ENST00000465223 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.72■□□□□ 0.43
NCSTN-210ENST00000465223 TTC3P53804 2025 aa17.72■□□□□ 0.43
NCSTN-210ENST00000465223 WDR19Q8NEZ3 1342 aa17.72■□□□□ 0.43
NCSTN-210ENST00000465223 ENPP3O14638 875 aa17.71■□□□□ 0.43
NCSTN-210ENST00000465223 RNF113AO15541 343 aaKnown RBP17.71■□□□□ 0.43
NCSTN-210ENST00000465223 PPFIA4O75335 1185 aa17.71■□□□□ 0.43
NCSTN-210ENST00000465223 DGKIO75912 1065 aa17.71■□□□□ 0.43
NCSTN-210ENST00000465223 NOVP48745 357 aa17.71■□□□□ 0.43
NCSTN-210ENST00000465223 NSUN6Q8TEA1 469 aaKnown RBP17.71■□□□□ 0.43
NCSTN-210ENST00000465223 SPATA33Q96N06 139 aa17.71■□□□□ 0.43
NCSTN-210ENST00000465223 CAND2O75155 1236 aa17.7■□□□□ 0.42
NCSTN-210ENST00000465223 GHRP10912 638 aa17.7■□□□□ 0.42
NCSTN-210ENST00000465223 EIF2AK2P19525 551 aaKnown RBP17.7■□□□□ 0.42
NCSTN-210ENST00000465223 MTMR3Q13615 1198 aa17.7■□□□□ 0.42
NCSTN-210ENST00000465223 MYSM1Q5VVJ2 828 aa17.7■□□□□ 0.42
NCSTN-210ENST00000465223 KBTBD3Q8NAB2 608 aa17.7■□□□□ 0.42
NCSTN-210ENST00000465223 RGS22Q8NE09 1264 aa17.7■□□□□ 0.42
NCSTN-210ENST00000465223 RMDN3Q96TC7 470 aa17.7■□□□□ 0.42
NCSTN-210ENST00000465223 SEC62Q99442 399 aaKnown RBP17.7■□□□□ 0.42
NCSTN-210ENST00000465223 NAPBQ9H115 298 aa17.7■□□□□ 0.42
NCSTN-210ENST00000465223 S1PR5Q9H228 398 aa17.7■□□□□ 0.42
NCSTN-210ENST00000465223 CDH22Q9UJ99 828 aa17.7■□□□□ 0.42
NCSTN-210ENST00000465223 PNMA2Q9UL42 364 aa17.7■□□□□ 0.42
NCSTN-210ENST00000465223 SORCS3Q9UPU3 1222 aa17.7■□□□□ 0.42
NCSTN-210ENST00000465223 SUPT16HQ9Y5B9 1047 aaKnown RBP17.7■□□□□ 0.42
NCSTN-210ENST00000465223 DMXL1Q9Y485 3027 aa17.7■□□□□ 0.42
NCSTN-210ENST00000465223 RANBP6O60518 1105 aaKnown RBP17.69■□□□□ 0.42
NCSTN-210ENST00000465223 PPFIA3O75145 1194 aa17.69■□□□□ 0.42
NCSTN-210ENST00000465223 RAB11FIP3O75154 756 aa17.69■□□□□ 0.42
NCSTN-210ENST00000465223 PUM1Q14671 1186 aaKnown RBP eCLIP17.69■□□□□ 0.42
NCSTN-210ENST00000465223 PAN2Q504Q3 1202 aaKnown RBP17.69■□□□□ 0.42
NCSTN-210ENST00000465223 NAALADL2Q58DX5 795 aa17.69■□□□□ 0.42
NCSTN-210ENST00000465223 FAM26DQ5JW98 314 aa17.69■□□□□ 0.42
NCSTN-210ENST00000465223 UBALD2Q8IYN6 164 aa17.69■□□□□ 0.42
NCSTN-210ENST00000465223 KCNG4Q8TDN1 519 aa17.69■□□□□ 0.42
NCSTN-210ENST00000465223 NEK1Q96PY6 1258 aa17.69■□□□□ 0.42
NCSTN-210ENST00000465223 IWS1Q96ST2 819 aa17.69■□□□□ 0.42
NCSTN-210ENST00000465223 TMEM47Q9BQJ4 181 aa17.69■□□□□ 0.42
NCSTN-210ENST00000465223 NACAP1Q9BZK3 213 aa17.69■□□□□ 0.42
NCSTN-210ENST00000465223 TSHZ2Q9NRE2 1034 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms