RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 FBLN5Q9UBX5 448 aa6.68□□□□□ -1.34
USP25-207ENST00000464435 HCFC2Q9Y5Z7 792 aa6.68□□□□□ -1.34
USP25-207ENST00000464435 X6R8D5 127 aa6.68□□□□□ -1.34
USP25-207ENST00000464435 C22orf46C9J442 243 aa6.67□□□□□ -1.34
USP25-207ENST00000464435 H7BY64 318 aa6.67□□□□□ -1.34
USP25-207ENST00000464435 MSCO60682 206 aa6.67□□□□□ -1.34
USP25-207ENST00000464435 NTRK1P04629 796 aa6.67□□□□□ -1.34
USP25-207ENST00000464435 LCP1P13796 627 aa6.67□□□□□ -1.34
USP25-207ENST00000464435 ATF2P15336 505 aa6.67□□□□□ -1.34
USP25-207ENST00000464435 BMP7P18075 431 aa6.67□□□□□ -1.34
USP25-207ENST00000464435 STAT3P40763 770 aa6.67□□□□□ -1.34
USP25-207ENST00000464435 HTRA3P83110 453 aa6.67□□□□□ -1.34
USP25-207ENST00000464435 CACNB2Q08289 660 aaPredicted RBP6.67□□□□□ -1.34
USP25-207ENST00000464435 CNNM4Q6P4Q7 775 aa6.67□□□□□ -1.34
USP25-207ENST00000464435 MAMDC2Q7Z304 686 aaPredicted RBP6.67□□□□□ -1.34
USP25-207ENST00000464435 RNF180Q86T96 592 aa6.67□□□□□ -1.34
USP25-207ENST00000464435 LRRTM3Q86VH5 581 aa6.67□□□□□ -1.34
USP25-207ENST00000464435 UBR7Q8N806 425 aa6.67□□□□□ -1.34
USP25-207ENST00000464435 ZCRB1Q8TBF4 217 aaKnown RBP6.67□□□□□ -1.34
USP25-207ENST00000464435 BRINP2Q9C0B6 783 aa6.67□□□□□ -1.34
USP25-207ENST00000464435 ZCCHC4Q9H5U6 513 aa6.67□□□□□ -1.34
USP25-207ENST00000464435 NGRNQ9NPE2 291 aaKnown RBP6.67□□□□□ -1.34
USP25-207ENST00000464435 NOP58Q9Y2X3 529 aaKnown RBP6.67□□□□□ -1.34
USP25-207ENST00000464435 TNPO3Q9Y5L0 923 aaKnown RBP6.67□□□□□ -1.34
USP25-207ENST00000464435 NPFFR2Q9Y5X5 522 aa6.67□□□□□ -1.34
USP25-207ENST00000464435 CRTAMO95727 393 aa6.66□□□□□ -1.34
USP25-207ENST00000464435 POU3F3P20264 500 aaPredicted RBP6.66□□□□□ -1.34
USP25-207ENST00000464435 PMLP29590 882 aa6.66□□□□□ -1.34
USP25-207ENST00000464435 LSAMPQ13449 338 aa6.66□□□□□ -1.34
USP25-207ENST00000464435 CHRNA2Q15822 529 aa6.66□□□□□ -1.34
USP25-207ENST00000464435 RSPO2Q6UXX9 243 aaPredicted RBP6.66□□□□□ -1.34
USP25-207ENST00000464435 KRT26Q7Z3Y9 468 aa6.66□□□□□ -1.34
USP25-207ENST00000464435 RPUSD2Q8IZ73 545 aaKnown RBP6.66□□□□□ -1.34
USP25-207ENST00000464435 DCAF4Q8WV16 495 aa6.66□□□□□ -1.34
USP25-207ENST00000464435 TRMT2BQ96GJ1 504 aaKnown RBP6.66□□□□□ -1.34
USP25-207ENST00000464435 MAGEC2Q9UBF1 373 aaPredicted RBP6.66□□□□□ -1.34
USP25-207ENST00000464435 PCDHA9Q9Y5H5 950 aa6.66□□□□□ -1.34
USP25-207ENST00000464435 PMF1-BGLAPU3KQ54 211 aa6.66□□□□□ -1.34
USP25-207ENST00000464435 TCRBV16S1A1N1A0A5B0 115 aa6.65□□□□□ -1.34
USP25-207ENST00000464435 TRIM13O60858 407 aa6.65□□□□□ -1.34
USP25-207ENST00000464435 EFCAB14O75071 495 aa6.65□□□□□ -1.34
USP25-207ENST00000464435 HMGB1P09429 215 aaKnown RBP6.65□□□□□ -1.34
USP25-207ENST00000464435 IBSPP21815 317 aaPredicted RBP6.65□□□□□ -1.34
USP25-207ENST00000464435 CNGA1P29973 690 aa6.65□□□□□ -1.34
USP25-207ENST00000464435 CTSWP56202 376 aa6.65□□□□□ -1.34
USP25-207ENST00000464435 IGBP1P78318 339 aa6.65□□□□□ -1.34
USP25-207ENST00000464435 CEP68Q76N32 757 aa6.65□□□□□ -1.34
USP25-207ENST00000464435 SAPCD2Q86UD0 394 aa6.65□□□□□ -1.34
USP25-207ENST00000464435 TEX2Q8IWB9 1127 aa6.65□□□□□ -1.34
USP25-207ENST00000464435 RCBTB1Q8NDN9 531 aa6.65□□□□□ -1.34
USP25-207ENST00000464435 FNIP1Q8TF40 1166 aa6.65□□□□□ -1.34
USP25-207ENST00000464435 CHAC2Q8WUX2 184 aa6.65□□□□□ -1.34
USP25-207ENST00000464435 TMEM169Q96HH4 297 aa6.65□□□□□ -1.34
USP25-207ENST00000464435 INTS7Q9NVH2 962 aaKnown RBP6.65□□□□□ -1.34
USP25-207ENST00000464435 FBXL7Q9UJT9 491 aa6.65□□□□□ -1.34
USP25-207ENST00000464435 COA3Q9Y2R0 106 aaPredicted RBP6.65□□□□□ -1.34
USP25-207ENST00000464435 SH3D21A4FU49 640 aa6.64□□□□□ -1.35
USP25-207ENST00000464435 OPA1O60313 960 aa6.64□□□□□ -1.35
USP25-207ENST00000464435 HOXA5P20719 270 aa6.64□□□□□ -1.35
USP25-207ENST00000464435 LIMS1P48059 325 aa6.64□□□□□ -1.35
USP25-207ENST00000464435 MTDHQ86UE4 582 aaKnown RBP6.64□□□□□ -1.35
USP25-207ENST00000464435 MIB1Q86YT6 1006 aa6.64□□□□□ -1.35
USP25-207ENST00000464435 TMX1Q9H3N1 280 aa6.64□□□□□ -1.35
USP25-207ENST00000464435 GPR27Q9NS67 375 aa6.64□□□□□ -1.35
USP25-207ENST00000464435 AQP7O14520 342 aa6.63□□□□□ -1.35
USP25-207ENST00000464435 FFAR3O14843 346 aa6.63□□□□□ -1.35
USP25-207ENST00000464435 SGSM2O43147 1006 aa6.63□□□□□ -1.35
USP25-207ENST00000464435 KPNA6O60684 536 aa6.63□□□□□ -1.35
USP25-207ENST00000464435 ASLP04424 464 aa6.63□□□□□ -1.35
USP25-207ENST00000464435 BCL6P41182 706 aa6.63□□□□□ -1.35
USP25-207ENST00000464435 CDKN1CP49918 316 aaPredicted RBP6.63□□□□□ -1.35
USP25-207ENST00000464435 ANAPC15P60006 121 aa6.63□□□□□ -1.35
USP25-207ENST00000464435 GPR85P60893 370 aa6.63□□□□□ -1.35
USP25-207ENST00000464435 GUCY1A3Q02108 690 aa6.63□□□□□ -1.35
USP25-207ENST00000464435 VWA3BQ502W6 1294 aa6.63□□□□□ -1.35
USP25-207ENST00000464435 PKN3Q6P5Z2 889 aa6.63□□□□□ -1.35
USP25-207ENST00000464435 ABHD17CQ6PCB6 329 aa6.63□□□□□ -1.35
USP25-207ENST00000464435 ETV3LQ6ZN32 361 aa6.63□□□□□ -1.35
USP25-207ENST00000464435 DDX1Q92499 740 aaKnown RBP6.63□□□□□ -1.35
USP25-207ENST00000464435 C20orf173Q96LM9 149 aa6.63□□□□□ -1.35
USP25-207ENST00000464435 MAGEB10Q96LZ2 347 aaPredicted RBP6.63□□□□□ -1.35
USP25-207ENST00000464435 CAAP1Q9H8G2 361 aa6.63□□□□□ -1.35
USP25-207ENST00000464435 RXFP1Q9HBX9 757 aa6.63□□□□□ -1.35
USP25-207ENST00000464435 BTG4Q9NY30 223 aa6.63□□□□□ -1.35
USP25-207ENST00000464435 PPARGC1AQ9UBK2 798 aaKnown RBP6.63□□□□□ -1.35
USP25-207ENST00000464435 JAG2Q9Y219 1238 aa6.63□□□□□ -1.35
USP25-207ENST00000464435 ZNF652Q9Y2D9 606 aa6.63□□□□□ -1.35
USP25-207ENST00000464435 PCDHA8Q9Y5H6 950 aa6.63□□□□□ -1.35
USP25-207ENST00000464435 PLA2G1BP04054 148 aaKnown RBP6.62□□□□□ -1.35
USP25-207ENST00000464435 CYP2C8P10632 490 aa6.62□□□□□ -1.35
USP25-207ENST00000464435 IGFALSP35858 605 aa6.62□□□□□ -1.35
USP25-207ENST00000464435 PCBP1Q15365 356 aaKnown RBP eCLIP6.62□□□□□ -1.35
USP25-207ENST00000464435 SEPT7Q16181 437 aaKnown RBP6.62□□□□□ -1.35
USP25-207ENST00000464435 STRA8Q7Z7C7 330 aa6.62□□□□□ -1.35
USP25-207ENST00000464435 ZC3H18Q86VM9 953 aaKnown RBP6.62□□□□□ -1.35
USP25-207ENST00000464435 NLRP10Q86W26 655 aa6.62□□□□□ -1.35
USP25-207ENST00000464435 LINC00482Q8N8I6 264 aa6.62□□□□□ -1.35
USP25-207ENST00000464435 TP53I13Q8NBR0 393 aaPredicted RBP6.62□□□□□ -1.35
USP25-207ENST00000464435 SMARCC2Q8TAQ2 1214 aa6.62□□□□□ -1.35
USP25-207ENST00000464435 ZFYVE21Q9BQ24 234 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms