RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 MAP3K14Q99558 947 aa16.74■□□□□ 0.27
ALMS1-202ENST00000464408 MTCH2Q9Y6C9 303 aa16.74■□□□□ 0.27
ALMS1-202ENST00000464408 BRWD1Q9NSI6 2320 aa16.74■□□□□ 0.27
ALMS1-202ENST00000464408 H3BRB1 525 aa16.73■□□□□ 0.27
ALMS1-202ENST00000464408 TLL1O43897 1013 aa16.73■□□□□ 0.27
ALMS1-202ENST00000464408 SMIM10L2AP0DMW4 78 aa16.73■□□□□ 0.27
ALMS1-202ENST00000464408 SMIM10L2BP0DMW5 78 aa16.73■□□□□ 0.27
ALMS1-202ENST00000464408 HOXC8P31273 242 aa16.73■□□□□ 0.27
ALMS1-202ENST00000464408 KIF5BP33176 963 aa16.73■□□□□ 0.27
ALMS1-202ENST00000464408 MCM5P33992 734 aa16.73■□□□□ 0.27
ALMS1-202ENST00000464408 SP4Q02446 784 aa16.73■□□□□ 0.27
ALMS1-202ENST00000464408 FAM117BQ6P1L5 589 aa16.73■□□□□ 0.27
ALMS1-202ENST00000464408 SERINC5Q86VE9 423 aa16.73■□□□□ 0.27
ALMS1-202ENST00000464408 GPR20Q99678 358 aa16.73■□□□□ 0.27
ALMS1-202ENST00000464408 TUT1Q9H6E5 874 aaKnown RBP16.73■□□□□ 0.27
ALMS1-202ENST00000464408 KAT6AQ92794 2004 aa16.73■□□□□ 0.27
ALMS1-202ENST00000464408 SIP14410 1827 aa16.73■□□□□ 0.27
ALMS1-202ENST00000464408 C17orf102A2RUQ5 167 aa16.72■□□□□ 0.27
ALMS1-202ENST00000464408 CCDC69A6NI79 296 aa16.72■□□□□ 0.27
ALMS1-202ENST00000464408 PIK3CDO00329 1044 aa16.72■□□□□ 0.27
ALMS1-202ENST00000464408 TREHO43280 583 aa16.72■□□□□ 0.27
ALMS1-202ENST00000464408 THPOP40225 353 aa16.72■□□□□ 0.27
ALMS1-202ENST00000464408 TFF2Q03403 129 aa16.72■□□□□ 0.27
ALMS1-202ENST00000464408 UBE2SQ16763 222 aa16.72■□□□□ 0.27
ALMS1-202ENST00000464408 GNPTABQ3T906 1256 aa16.72■□□□□ 0.27
ALMS1-202ENST00000464408 PCNX4Q63HM2 1172 aa16.72■□□□□ 0.27
ALMS1-202ENST00000464408 METTL7BQ6UX53 244 aa16.72■□□□□ 0.27
ALMS1-202ENST00000464408 CCDC82Q8N4S0 544 aa16.72■□□□□ 0.27
ALMS1-202ENST00000464408 ATXN2LQ8WWM7 1075 aaKnown RBP16.72■□□□□ 0.27
ALMS1-202ENST00000464408 SYMPKQ92797 1274 aaKnown RBP16.72■□□□□ 0.27
ALMS1-202ENST00000464408 ASB2Q96Q27 587 aa16.72■□□□□ 0.27
ALMS1-202ENST00000464408 RNPEPQ9H4A4 650 aa16.72■□□□□ 0.27
ALMS1-202ENST00000464408 ANO2Q9NQ90 1003 aa16.72■□□□□ 0.27
ALMS1-202ENST00000464408 SEC63Q9UGP8 760 aaKnown RBP16.72■□□□□ 0.27
ALMS1-202ENST00000464408 BDP1A6H8Y1 2624 aa16.72■□□□□ 0.27
ALMS1-202ENST00000464408 KIF28PB7ZC32 967 aa16.71■□□□□ 0.27
ALMS1-202ENST00000464408 NOP56O00567 594 aaKnown RBP16.71■□□□□ 0.27
ALMS1-202ENST00000464408 FIBPO43427 364 aa16.71■□□□□ 0.27
ALMS1-202ENST00000464408 LPXNO60711 386 aa16.71■□□□□ 0.27
ALMS1-202ENST00000464408 SMARCA1P28370 1054 aa16.71■□□□□ 0.27
ALMS1-202ENST00000464408 NEDD9Q14511 834 aa16.71■□□□□ 0.27
ALMS1-202ENST00000464408 UTP14CQ5TAP6 766 aaKnown RBP16.71■□□□□ 0.27
ALMS1-202ENST00000464408 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.71■□□□□ 0.27
ALMS1-202ENST00000464408 CUL5Q93034 780 aa16.71■□□□□ 0.27
ALMS1-202ENST00000464408 ATP6V0A1Q93050 837 aa16.71■□□□□ 0.27
ALMS1-202ENST00000464408 TMEM87BQ96K49 555 aa16.71■□□□□ 0.27
ALMS1-202ENST00000464408 TCEANC2Q96MN5 208 aa16.71■□□□□ 0.27
ALMS1-202ENST00000464408 LZTS2Q9BRK4 669 aa16.71■□□□□ 0.27
ALMS1-202ENST00000464408 SETD4Q9NVD3 440 aa16.71■□□□□ 0.27
ALMS1-202ENST00000464408 ABHD14A-ACY1A0A1B0GW23 586 aa16.7■□□□□ 0.26
ALMS1-202ENST00000464408 RSPH10B2B2RC85 870 aa16.7■□□□□ 0.26
ALMS1-202ENST00000464408 ATP9AO75110 1047 aa16.7■□□□□ 0.26
ALMS1-202ENST00000464408 LGR5O75473 907 aa16.7■□□□□ 0.26
ALMS1-202ENST00000464408 STAM2O75886 525 aa16.7■□□□□ 0.26
ALMS1-202ENST00000464408 PARNO95453 639 aaKnown RBP16.7■□□□□ 0.26
ALMS1-202ENST00000464408 CTSHP09668 335 aa16.7■□□□□ 0.26
ALMS1-202ENST00000464408 RSPH10BP0C881 870 aa16.7■□□□□ 0.26
ALMS1-202ENST00000464408 LIFRP42702 1097 aa16.7■□□□□ 0.26
ALMS1-202ENST00000464408 MRPS5P82675 430 aaKnown RBP16.7■□□□□ 0.26
ALMS1-202ENST00000464408 GRB10Q13322 594 aa16.7■□□□□ 0.26
ALMS1-202ENST00000464408 MKRN4PQ13434 485 aaPredicted RBP16.7■□□□□ 0.26
ALMS1-202ENST00000464408 TMTC3Q6ZXV5 915 aa16.7■□□□□ 0.26
ALMS1-202ENST00000464408 MICU3Q86XE3 530 aa16.7■□□□□ 0.26
ALMS1-202ENST00000464408 DBF4BQ8NFT6 615 aa16.7■□□□□ 0.26
ALMS1-202ENST00000464408 GDPD5Q8WTR4 605 aa16.7■□□□□ 0.26
ALMS1-202ENST00000464408 MTA3Q9BTC8 594 aa16.7■□□□□ 0.26
ALMS1-202ENST00000464408 ZBED2Q9BTP6 218 aa16.7■□□□□ 0.26
ALMS1-202ENST00000464408 PKD2L1Q9P0L9 805 aa16.7■□□□□ 0.26
ALMS1-202ENST00000464408 MTUS1Q9ULD2 1270 aa16.7■□□□□ 0.26
ALMS1-202ENST00000464408 GJB5O95377 273 aa16.69■□□□□ 0.26
ALMS1-202ENST00000464408 ITGB5P18084 799 aa16.69■□□□□ 0.26
ALMS1-202ENST00000464408 POU3F3P20264 500 aaPredicted RBP16.69■□□□□ 0.26
ALMS1-202ENST00000464408 GNAQP50148 359 aa16.69■□□□□ 0.26
ALMS1-202ENST00000464408 IKBKEQ14164 716 aa16.69■□□□□ 0.26
ALMS1-202ENST00000464408 SKIV2LQ15477 1246 aaKnown RBP16.69■□□□□ 0.26
ALMS1-202ENST00000464408 FANCBQ8NB91 859 aa16.69■□□□□ 0.26
ALMS1-202ENST00000464408 ADAMTS19Q8TE59 1207 aa16.69■□□□□ 0.26
ALMS1-202ENST00000464408 NECAB3Q96P71 396 aaPredicted RBP16.69■□□□□ 0.26
ALMS1-202ENST00000464408 USP26Q9BXU7 913 aa16.69■□□□□ 0.26
ALMS1-202ENST00000464408 PSTPIP2Q9H939 334 aa16.69■□□□□ 0.26
ALMS1-202ENST00000464408 SLC12A7Q9Y666 1083 aa16.69■□□□□ 0.26
ALMS1-202ENST00000464408 LINC01553A4QN01 128 aa16.68■□□□□ 0.26
ALMS1-202ENST00000464408 TNFRSF10AO00220 468 aa16.68■□□□□ 0.26
ALMS1-202ENST00000464408 KCNA2P16389 499 aa16.68■□□□□ 0.26
ALMS1-202ENST00000464408 KCNQ1P51787 676 aa16.68■□□□□ 0.26
ALMS1-202ENST00000464408 PLEKHG4Q58EX7 1191 aa16.68■□□□□ 0.26
ALMS1-202ENST00000464408 HEATR3Q7Z4Q2 680 aa16.68■□□□□ 0.26
ALMS1-202ENST00000464408 SGMS1Q86VZ5 419 aa16.68■□□□□ 0.26
ALMS1-202ENST00000464408 RASEFQ8IZ41 740 aa16.68■□□□□ 0.26
ALMS1-202ENST00000464408 TMTC2Q8N394 836 aa16.68■□□□□ 0.26
ALMS1-202ENST00000464408 LMBR1Q8WVP7 490 aa16.68■□□□□ 0.26
ALMS1-202ENST00000464408 BRPF3Q9ULD4 1205 aa16.68■□□□□ 0.26
ALMS1-202ENST00000464408 CNTNAP5Q8WYK1 1306 aa16.68■□□□□ 0.26
ALMS1-202ENST00000464408 GTPBP6O43824 516 aaPredicted RBP16.67■□□□□ 0.26
ALMS1-202ENST00000464408 CALM1P0DP23 149 aa16.67■□□□□ 0.26
ALMS1-202ENST00000464408 CALM2P0DP24 149 aa16.67■□□□□ 0.26
ALMS1-202ENST00000464408 CALM3P0DP25 149 aa16.67■□□□□ 0.26
ALMS1-202ENST00000464408 ADAM17P78536 824 aa16.67■□□□□ 0.26
ALMS1-202ENST00000464408 ARHGAP4P98171 946 aa16.67■□□□□ 0.26
ALMS1-202ENST00000464408 ADCK5Q3MIX3 580 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms