RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 SART3Q15020 963 aaKnown RBP10.1□□□□□ -0.79
HDAC9-220ENST00000461409 ARHGEF16Q5VV41 709 aa10.1□□□□□ -0.79
HDAC9-220ENST00000461409 CCDC62Q6P9F0 684 aa10.1□□□□□ -0.79
HDAC9-220ENST00000461409 SEPT14Q6ZU15 432 aa10.1□□□□□ -0.79
HDAC9-220ENST00000461409 RALYLQ86SE5 291 aaKnown RBP10.1□□□□□ -0.79
HDAC9-220ENST00000461409 RETREG2Q8NC44 543 aa10.1□□□□□ -0.79
HDAC9-220ENST00000461409 EMID1Q96A84 441 aaPredicted RBP10.1□□□□□ -0.79
HDAC9-220ENST00000461409 COL25A1Q9BXS0 654 aaPredicted RBP10.1□□□□□ -0.79
HDAC9-220ENST00000461409 SLC6A16Q9GZN6 736 aa10.1□□□□□ -0.79
HDAC9-220ENST00000461409 VAT1LQ9HCJ6 419 aa10.1□□□□□ -0.79
HDAC9-220ENST00000461409 MAP3K20Q9NYL2 800 aaKnown RBP10.1□□□□□ -0.79
HDAC9-220ENST00000461409 CXXC1Q9P0U4 656 aaPredicted RBP10.1□□□□□ -0.79
HDAC9-220ENST00000461409 CHD7Q9P2D1 2997 aa10.09□□□□□ -0.79
HDAC9-220ENST00000461409 ZBBXA8MT70 800 aa10.09□□□□□ -0.79
HDAC9-220ENST00000461409 ZBTB5O15062 677 aa10.09□□□□□ -0.79
HDAC9-220ENST00000461409 ARIH2O95376 493 aa10.09□□□□□ -0.79
HDAC9-220ENST00000461409 CFBP00751 764 aa10.09□□□□□ -0.79
HDAC9-220ENST00000461409 GSPT1P15170 499 aaKnown RBP10.09□□□□□ -0.79
HDAC9-220ENST00000461409 ATP2A2P16615 1042 aaKnown RBP10.09□□□□□ -0.79
HDAC9-220ENST00000461409 EIF2AK2P19525 551 aaKnown RBP10.09□□□□□ -0.79
HDAC9-220ENST00000461409 CASTP20810 708 aaKnown RBP10.09□□□□□ -0.79
HDAC9-220ENST00000461409 HSD17B4P51659 736 aa10.09□□□□□ -0.79
HDAC9-220ENST00000461409 ARHGAP1Q07960 439 aa10.09□□□□□ -0.79
HDAC9-220ENST00000461409 SEC23AQ15436 765 aa10.09□□□□□ -0.79
HDAC9-220ENST00000461409 DGKDQ16760 1214 aa10.09□□□□□ -0.79
HDAC9-220ENST00000461409 SAMD3Q8N6K7 520 aa10.09□□□□□ -0.79
HDAC9-220ENST00000461409 CCDC155Q8N6L0 562 aa10.09□□□□□ -0.79
HDAC9-220ENST00000461409 AFG1LQ8WV93 481 aa10.09□□□□□ -0.79
HDAC9-220ENST00000461409 COPS5Q92905 334 aa10.09□□□□□ -0.79
HDAC9-220ENST00000461409 MTMR8Q96EF0 704 aa10.09□□□□□ -0.79
HDAC9-220ENST00000461409 SCLYQ96I15 445 aa10.09□□□□□ -0.79
HDAC9-220ENST00000461409 TAAR1Q96RJ0 339 aa10.09□□□□□ -0.79
HDAC9-220ENST00000461409 SLC28A3Q9HAS3 691 aa10.09□□□□□ -0.79
HDAC9-220ENST00000461409 PXMP2Q9NR77 195 aa10.09□□□□□ -0.79
HDAC9-220ENST00000461409 COL20A1Q9P218 1284 aa10.09□□□□□ -0.79
HDAC9-220ENST00000461409 SUPT16HQ9Y5B9 1047 aaKnown RBP10.09□□□□□ -0.79
HDAC9-220ENST00000461409 PCDHA11Q9Y5I1 949 aa10.09□□□□□ -0.79
HDAC9-220ENST00000461409 PCDHA1Q9Y5I3 950 aa10.09□□□□□ -0.79
HDAC9-220ENST00000461409 TTC28Q96AY4 2481 aa10.08□□□□□ -0.8
HDAC9-220ENST00000461409 PALM3A6NDB9 673 aaPredicted RBP10.08□□□□□ -0.8
HDAC9-220ENST00000461409 IFIT3O14879 490 aaKnown RBP10.08□□□□□ -0.8
HDAC9-220ENST00000461409 NR3C2P08235 984 aa10.08□□□□□ -0.8
HDAC9-220ENST00000461409 MMP3P08254 477 aa10.08□□□□□ -0.8
HDAC9-220ENST00000461409 CHMLP26374 656 aa10.08□□□□□ -0.8
HDAC9-220ENST00000461409 CHMP4BP1P59074 171 aa10.08□□□□□ -0.8
HDAC9-220ENST00000461409 GHRHRQ02643 423 aa10.08□□□□□ -0.8
HDAC9-220ENST00000461409 LAMC2Q13753 1193 aa10.08□□□□□ -0.8
HDAC9-220ENST00000461409 LY6KQ17RY6 165 aa10.08□□□□□ -0.8
HDAC9-220ENST00000461409 ZNF787Q6DD87 383 aa10.08□□□□□ -0.8
HDAC9-220ENST00000461409 KCNV1Q6PIU1 500 aa10.08□□□□□ -0.8
HDAC9-220ENST00000461409 BRICD5Q6PL45 260 aa10.08□□□□□ -0.8
HDAC9-220ENST00000461409 SESTD1Q86VW0 696 aa10.08□□□□□ -0.8
HDAC9-220ENST00000461409 STAG2Q8N3U4 1231 aa10.08□□□□□ -0.8
HDAC9-220ENST00000461409 PPTC7Q8NI37 304 aa10.08□□□□□ -0.8
HDAC9-220ENST00000461409 CAGE1Q8TC20 777 aa10.08□□□□□ -0.8
HDAC9-220ENST00000461409 TBC1D5Q92609 795 aa10.08□□□□□ -0.8
HDAC9-220ENST00000461409 SYMPKQ92797 1274 aaKnown RBP10.08□□□□□ -0.8
HDAC9-220ENST00000461409 KATNAL1Q9BW62 490 aa10.08□□□□□ -0.8
HDAC9-220ENST00000461409 IL25Q9H293 177 aa10.08□□□□□ -0.8
HDAC9-220ENST00000461409 PRDM12Q9H4Q4 367 aa10.08□□□□□ -0.8
HDAC9-220ENST00000461409 MAD2L2Q9UI95 211 aa10.08□□□□□ -0.8
HDAC9-220ENST00000461409 MRVI1Q9Y6F6 885 aa10.08□□□□□ -0.8
HDAC9-220ENST00000461409 SCN10AQ9Y5Y9 1956 aa10.08□□□□□ -0.8
HDAC9-220ENST00000461409 PARNO95453 639 aaKnown RBP10.07□□□□□ -0.8
HDAC9-220ENST00000461409 CYP21A2P08686 494 aa10.07□□□□□ -0.8
HDAC9-220ENST00000461409 IQCF3P0C7M6 154 aa10.07□□□□□ -0.8
HDAC9-220ENST00000461409 USP46P62068 366 aa10.07□□□□□ -0.8
HDAC9-220ENST00000461409 GRM4Q14833 912 aa10.07□□□□□ -0.8
HDAC9-220ENST00000461409 WTAPQ15007 396 aa10.07□□□□□ -0.8
HDAC9-220ENST00000461409 PTGISQ16647 500 aa10.07□□□□□ -0.8
HDAC9-220ENST00000461409 PPP2R2DQ66LE6 453 aa10.07□□□□□ -0.8
HDAC9-220ENST00000461409 RNF19BQ6ZMZ0 732 aa10.07□□□□□ -0.8
HDAC9-220ENST00000461409 STOX1Q6ZVD7 989 aa10.07□□□□□ -0.8
HDAC9-220ENST00000461409 CYB5R4Q7L1T6 521 aa10.07□□□□□ -0.8
HDAC9-220ENST00000461409 CHST3Q7LGC8 479 aa10.07□□□□□ -0.8
HDAC9-220ENST00000461409 DEFB128Q7Z7B8 93 aa10.07□□□□□ -0.8
HDAC9-220ENST00000461409 CATIPQ7Z7H3 387 aa10.07□□□□□ -0.8
HDAC9-220ENST00000461409 NCOA7Q8NI08 942 aa10.07□□□□□ -0.8
HDAC9-220ENST00000461409 AFAP1L1Q8TED9 768 aa10.07□□□□□ -0.8
HDAC9-220ENST00000461409 SLC9A7Q96T83 725 aa10.07□□□□□ -0.8
HDAC9-220ENST00000461409 FTOQ9C0B1 505 aaKnown RBP eCLIP10.07□□□□□ -0.8
HDAC9-220ENST00000461409 NKX2-4Q9H2Z4 354 aa10.07□□□□□ -0.8
HDAC9-220ENST00000461409 DDX41Q9UJV9 622 aaKnown RBP10.07□□□□□ -0.8
HDAC9-220ENST00000461409 YBX2Q9Y2T7 364 aaKnown RBP10.07□□□□□ -0.8
HDAC9-220ENST00000461409 TRANK1O15050 2925 aa10.07□□□□□ -0.8
HDAC9-220ENST00000461409 SPTBN5Q9NRC6 3674 aaKnown RBP10.06□□□□□ -0.8
HDAC9-220ENST00000461409 E7EWF7 191 aa10.06□□□□□ -0.8
HDAC9-220ENST00000461409 GCOM1H8Y6P7 765 aaPredicted RBP10.06□□□□□ -0.8
HDAC9-220ENST00000461409 OPLAHO14841 1288 aa10.06□□□□□ -0.8
HDAC9-220ENST00000461409 SGSM2O43147 1006 aa10.06□□□□□ -0.8
HDAC9-220ENST00000461409 HOXA2O43364 376 aa10.06□□□□□ -0.8
HDAC9-220ENST00000461409 PPP1R11O60927 126 aaPredicted RBP10.06□□□□□ -0.8
HDAC9-220ENST00000461409 BAIAP3O94812 1187 aa10.06□□□□□ -0.8
HDAC9-220ENST00000461409 POLR2MP0CAP2 368 aa10.06□□□□□ -0.8
HDAC9-220ENST00000461409 TGFB3P10600 412 aa10.06□□□□□ -0.8
HDAC9-220ENST00000461409 CCND2P30279 289 aa10.06□□□□□ -0.8
HDAC9-220ENST00000461409 PTH1RQ03431 593 aa10.06□□□□□ -0.8
HDAC9-220ENST00000461409 TMEM67Q5HYA8 995 aa10.06□□□□□ -0.8
HDAC9-220ENST00000461409 HOMER1Q86YM7 354 aa10.06□□□□□ -0.8
HDAC9-220ENST00000461409 DHX37Q8IY37 1157 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms