RNA–Protein interactions for RNA: ENST00000461219.5

SCAF8-204, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-204ENST00000461219 MXRA8Q9BRK3 442 aa23.38■■□□□ 1.33
SCAF8-204ENST00000461219 C22orf23Q9BZE7 217 aa23.38■■□□□ 1.33
SCAF8-204ENST00000461219 SREBF1P36956 1147 aa23.37■■□□□ 1.33
SCAF8-204ENST00000461219 CLK2P49760 499 aaKnown RBP23.37■■□□□ 1.33
SCAF8-204ENST00000461219 PPIGQ13427 754 aaKnown RBP eCLIP23.37■■□□□ 1.33
SCAF8-204ENST00000461219 UTP14CQ5TAP6 766 aaKnown RBP23.37■■□□□ 1.33
SCAF8-204ENST00000461219 MFSD5Q6N075 450 aa23.37■■□□□ 1.33
SCAF8-204ENST00000461219 SDF4Q9BRK5 362 aa23.37■■□□□ 1.33
SCAF8-204ENST00000461219 ZNF215Q9UL58 517 aaPredicted RBP23.37■■□□□ 1.33
SCAF8-204ENST00000461219 ITGB8P26012 769 aa23.36■■□□□ 1.33
SCAF8-204ENST00000461219 CYP2C18P33260 490 aa23.36■■□□□ 1.33
SCAF8-204ENST00000461219 PTGISQ16647 500 aa23.36■■□□□ 1.33
SCAF8-204ENST00000461219 CEP55Q53EZ4 464 aa23.36■■□□□ 1.33
SCAF8-204ENST00000461219 CCDC155Q8N6L0 562 aa23.36■■□□□ 1.33
SCAF8-204ENST00000461219 WASF1Q92558 559 aa23.36■■□□□ 1.33
SCAF8-204ENST00000461219 IL17RAQ96F46 866 aa23.36■■□□□ 1.33
SCAF8-204ENST00000461219 F2P00734 622 aa23.35■■□□□ 1.33
SCAF8-204ENST00000461219 LGALS2P05162 132 aa23.35■■□□□ 1.33
SCAF8-204ENST00000461219 CYP2C9P11712 490 aa23.35■■□□□ 1.33
SCAF8-204ENST00000461219 RETREG2Q8NC44 543 aa23.35■■□□□ 1.33
SCAF8-204ENST00000461219 RASGRP4Q8TDF6 673 aa23.35■■□□□ 1.33
SCAF8-204ENST00000461219 KAT2BQ92831 832 aa23.35■■□□□ 1.33
SCAF8-204ENST00000461219 GPR20Q99678 358 aa23.35■■□□□ 1.33
SCAF8-204ENST00000461219 BCAS3Q9H6U6 928 aa23.35■■□□□ 1.33
SCAF8-204ENST00000461219 KCNH7Q9NS40 1196 aa23.35■■□□□ 1.33
SCAF8-204ENST00000461219 TCEAL9Q9UHQ7 104 aa23.35■■□□□ 1.33
SCAF8-204ENST00000461219 H3BRB1 525 aa23.34■■□□□ 1.33
SCAF8-204ENST00000461219 FXR1P51114 621 aaKnown RBP eCLIP23.34■■□□□ 1.33
SCAF8-204ENST00000461219 BFSP2Q13515 415 aa23.34■■□□□ 1.33
SCAF8-204ENST00000461219 NECAB1Q8N987 351 aa23.34■■□□□ 1.33
SCAF8-204ENST00000461219 TUT1Q9H6E5 874 aaKnown RBP23.34■■□□□ 1.33
SCAF8-204ENST00000461219 JPH1Q9HDC5 661 aaPredicted RBP23.34■■□□□ 1.33
SCAF8-204ENST00000461219 HDAC6Q9UBN7 1215 aa23.34■■□□□ 1.33
SCAF8-204ENST00000461219 PCDHA4Q9UN74 947 aa23.34■■□□□ 1.33
SCAF8-204ENST00000461219 STK36Q9NRP7 1315 aa23.33■■□□□ 1.33
SCAF8-204ENST00000461219 MYH9P35579 1960 aaKnown RBP23.33■■□□□ 1.33
SCAF8-204ENST00000461219 ATP9AO75110 1047 aa23.33■■□□□ 1.33
SCAF8-204ENST00000461219 HOXD8P13378 290 aaPredicted RBP23.33■■□□□ 1.33
SCAF8-204ENST00000461219 KCNA2P16389 499 aa23.33■■□□□ 1.33
SCAF8-204ENST00000461219 CCL23P55773 120 aa23.33■■□□□ 1.33
SCAF8-204ENST00000461219 ME3Q16798 604 aa23.33■■□□□ 1.33
SCAF8-204ENST00000461219 PLA2G4DQ86XP0 818 aa23.33■■□□□ 1.33
SCAF8-204ENST00000461219 FAM177A1Q8N128 213 aaPredicted RBP23.33■■□□□ 1.33
SCAF8-204ENST00000461219 GTF3C6Q969F1 213 aa23.33■■□□□ 1.33
SCAF8-204ENST00000461219 NOC4LQ9BVI4 516 aaKnown RBP23.33■■□□□ 1.33
SCAF8-204ENST00000461219 ORC3Q9UBD5 711 aaPredicted RBP23.33■■□□□ 1.33
SCAF8-204ENST00000461219 TANC1Q9C0D5 1861 aa23.32■■□□□ 1.32
SCAF8-204ENST00000461219 SCN5AQ14524 2016 aa23.32■■□□□ 1.32
SCAF8-204ENST00000461219 CSF2RAP15509 400 aa23.32■■□□□ 1.32
SCAF8-204ENST00000461219 TCF7P36402 384 aaPredicted RBP23.32■■□□□ 1.32
SCAF8-204ENST00000461219 SETQ01105 290 aaPredicted RBP23.32■■□□□ 1.32
SCAF8-204ENST00000461219 SHHQ15465 462 aa23.32■■□□□ 1.32
SCAF8-204ENST00000461219 GALNT17Q6IS24 598 aa23.32■■□□□ 1.32
SCAF8-204ENST00000461219 GDF6Q6KF10 455 aaPredicted RBP23.32■■□□□ 1.32
SCAF8-204ENST00000461219 SESTD1Q86VW0 696 aa23.32■■□□□ 1.32
SCAF8-204ENST00000461219 BLIDQ8IZY5 108 aa23.32■■□□□ 1.32
SCAF8-204ENST00000461219 CYP2W1Q8TAV3 490 aa23.32■■□□□ 1.32
SCAF8-204ENST00000461219 SEPT1Q8WYJ6 367 aa23.32■■□□□ 1.32
SCAF8-204ENST00000461219 GLG1Q92896 1179 aa23.32■■□□□ 1.32
SCAF8-204ENST00000461219 RNPC3Q96LT9 517 aaKnown RBP23.32■■□□□ 1.32
SCAF8-204ENST00000461219 AIFM3Q96NN9 605 aa23.32■■□□□ 1.32
SCAF8-204ENST00000461219 SLC9A2Q9UBY0 812 aa23.32■■□□□ 1.32
SCAF8-204ENST00000461219 GTF2IRD1Q9UHL9 959 aa23.32■■□□□ 1.32
SCAF8-204ENST00000461219 NIPA1Q7RTP0 329 aa23.31■■□□□ 1.32
SCAF8-204ENST00000461219 C16orf70Q9BSU1 422 aa23.31■■□□□ 1.32
SCAF8-204ENST00000461219 AZI2Q9H6S1 392 aa23.31■■□□□ 1.32
SCAF8-204ENST00000461219 LIMCH1Q9UPQ0 1083 aa23.31■■□□□ 1.32
SCAF8-204ENST00000461219 C17orf102A2RUQ5 167 aa23.3■■□□□ 1.32
SCAF8-204ENST00000461219 DDX39AO00148 427 aaKnown RBP23.3■■□□□ 1.32
SCAF8-204ENST00000461219 HAS3O00219 553 aa23.3■■□□□ 1.32
SCAF8-204ENST00000461219 MEIS1O00470 390 aa23.3■■□□□ 1.32
SCAF8-204ENST00000461219 CYP3A4P08684 503 aa23.3■■□□□ 1.32
SCAF8-204ENST00000461219 ARP10275 920 aa23.3■■□□□ 1.32
SCAF8-204ENST00000461219 C9orf50Q5SZB4 431 aa23.3■■□□□ 1.32
SCAF8-204ENST00000461219 PSRC1Q6PGN9 363 aaPredicted RBP23.3■■□□□ 1.32
SCAF8-204ENST00000461219 RPUSD2Q8IZ73 545 aaKnown RBP23.3■■□□□ 1.32
SCAF8-204ENST00000461219 MTIF3Q9H2K0 278 aaKnown RBP23.3■■□□□ 1.32
SCAF8-204ENST00000461219 AGO4Q9HCK5 861 aaKnown RBP23.3■■□□□ 1.32
SCAF8-204ENST00000461219 BRMS1Q9HCU9 246 aa23.3■■□□□ 1.32
SCAF8-204ENST00000461219 NFASCO94856 1347 aa23.3■■□□□ 1.32
SCAF8-204ENST00000461219 UMODL1Q5DID0 1318 aa23.3■■□□□ 1.32
SCAF8-204ENST00000461219 LARGE1O95461 756 aa23.29■■□□□ 1.32
SCAF8-204ENST00000461219 ACRP10323 421 aa23.29■■□□□ 1.32
SCAF8-204ENST00000461219 GNAT1P11488 350 aa23.29■■□□□ 1.32
SCAF8-204ENST00000461219 TRIM29Q14134 588 aa23.29■■□□□ 1.32
SCAF8-204ENST00000461219 LRIT3Q3SXY7 679 aa23.29■■□□□ 1.32
SCAF8-204ENST00000461219 PRR16Q569H4 304 aa23.29■■□□□ 1.32
SCAF8-204ENST00000461219 TRIM50Q86XT4 487 aa23.29■■□□□ 1.32
SCAF8-204ENST00000461219 SCLYQ96I15 445 aa23.29■■□□□ 1.32
SCAF8-204ENST00000461219 ZNF577Q9BSK1 485 aa23.29■■□□□ 1.32
SCAF8-204ENST00000461219 IL23AQ9NPF7 189 aa23.29■■□□□ 1.32
SCAF8-204ENST00000461219 KCNJ14Q9UNX9 436 aa23.29■■□□□ 1.32
SCAF8-204ENST00000461219 CCDC194A0A1B0GVG4 234 aa23.28■■□□□ 1.32
SCAF8-204ENST00000461219 ADAMTS3O15072 1205 aa23.28■■□□□ 1.32
SCAF8-204ENST00000461219 SMIM10L2AP0DMW4 78 aa23.28■■□□□ 1.32
SCAF8-204ENST00000461219 SMIM10L2BP0DMW5 78 aa23.28■■□□□ 1.32
SCAF8-204ENST00000461219 CAGE1Q8TC20 777 aa23.28■■□□□ 1.32
SCAF8-204ENST00000461219 ATP6V0A1Q93050 837 aa23.28■■□□□ 1.32
SCAF8-204ENST00000461219 SMARCAD1Q9H4L7 1026 aa23.28■■□□□ 1.32
SCAF8-204ENST00000461219 RANBP2P49792 3224 aaKnown RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms