RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 LY9Q9HBG7 655 aa16.99■□□□□ 0.31
SMPD4-216ENST00000461187 EVPLQ92817 2033 aa16.99■□□□□ 0.31
SMPD4-216ENST00000461187 SPATA31C2B4DYI2 1134 aa16.98■□□□□ 0.31
SMPD4-216ENST00000461187 H3BRB1 525 aa16.98■□□□□ 0.31
SMPD4-216ENST00000461187 EFCAB14O75071 495 aa16.98■□□□□ 0.31
SMPD4-216ENST00000461187 LGALS2P05162 132 aa16.98■□□□□ 0.31
SMPD4-216ENST00000461187 BMP1P13497 986 aa16.98■□□□□ 0.31
SMPD4-216ENST00000461187 IKBKEQ14164 716 aa16.98■□□□□ 0.31
SMPD4-216ENST00000461187 SKIV2LQ15477 1246 aaKnown RBP16.98■□□□□ 0.31
SMPD4-216ENST00000461187 GNPTABQ3T906 1256 aa16.98■□□□□ 0.31
SMPD4-216ENST00000461187 ZNF654Q8IZM8 581 aa16.98■□□□□ 0.31
SMPD4-216ENST00000461187 IL27Q8NEV9 243 aa16.98■□□□□ 0.31
SMPD4-216ENST00000461187 MYL10Q9BUA6 226 aa16.98■□□□□ 0.31
SMPD4-216ENST00000461187 TUT1Q9H6E5 874 aaKnown RBP16.98■□□□□ 0.31
SMPD4-216ENST00000461187 MYH9P35579 1960 aaKnown RBP16.98■□□□□ 0.31
SMPD4-216ENST00000461187 C17orf102A2RUQ5 167 aa16.97■□□□□ 0.31
SMPD4-216ENST00000461187 LGR5O75473 907 aa16.97■□□□□ 0.31
SMPD4-216ENST00000461187 DDAH1O94760 285 aa16.97■□□□□ 0.31
SMPD4-216ENST00000461187 SMIM10L2AP0DMW4 78 aa16.97■□□□□ 0.31
SMPD4-216ENST00000461187 SMIM10L2BP0DMW5 78 aa16.97■□□□□ 0.31
SMPD4-216ENST00000461187 SMARCA1P28370 1054 aa16.97■□□□□ 0.31
SMPD4-216ENST00000461187 THPOP40225 353 aa16.97■□□□□ 0.31
SMPD4-216ENST00000461187 MKRN4PQ13434 485 aaPredicted RBP16.97■□□□□ 0.31
SMPD4-216ENST00000461187 NEDD9Q14511 834 aa16.97■□□□□ 0.31
SMPD4-216ENST00000461187 METTL7BQ6UX53 244 aa16.97■□□□□ 0.31
SMPD4-216ENST00000461187 CYFIP1Q7L576 1253 aa16.97■□□□□ 0.31
SMPD4-216ENST00000461187 ATP6V0A1Q93050 837 aa16.97■□□□□ 0.31
SMPD4-216ENST00000461187 RAD9AQ99638 391 aa16.97■□□□□ 0.31
SMPD4-216ENST00000461187 GPR20Q99678 358 aa16.97■□□□□ 0.31
SMPD4-216ENST00000461187 RNPEPQ9H4A4 650 aa16.97■□□□□ 0.31
SMPD4-216ENST00000461187 RTEL1Q9NZ71 1219 aa16.97■□□□□ 0.31
SMPD4-216ENST00000461187 TTC3P53804 2025 aa16.97■□□□□ 0.31
SMPD4-216ENST00000461187 EMSYQ7Z589 1322 aa16.96■□□□□ 0.31
SMPD4-216ENST00000461187 RSPH10B2B2RC85 870 aa16.96■□□□□ 0.31
SMPD4-216ENST00000461187 PIK3CDO00329 1044 aa16.96■□□□□ 0.31
SMPD4-216ENST00000461187 NOP56O00567 594 aaKnown RBP16.96■□□□□ 0.31
SMPD4-216ENST00000461187 MEIS2O14770 477 aa16.96■□□□□ 0.31
SMPD4-216ENST00000461187 TREHO43280 583 aa16.96■□□□□ 0.31
SMPD4-216ENST00000461187 FIBPO43427 364 aa16.96■□□□□ 0.31
SMPD4-216ENST00000461187 RSPH10BP0C881 870 aa16.96■□□□□ 0.31
SMPD4-216ENST00000461187 KCNQ1P51787 676 aa16.96■□□□□ 0.31
SMPD4-216ENST00000461187 COL9A3Q14050 684 aaPredicted RBP16.96■□□□□ 0.31
SMPD4-216ENST00000461187 AAK1Q2M2I8 961 aa16.96■□□□□ 0.31
SMPD4-216ENST00000461187 USP17L6PQ6QN14 398 aa16.96■□□□□ 0.31
SMPD4-216ENST00000461187 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.96■□□□□ 0.31
SMPD4-216ENST00000461187 DBF4BQ8NFT6 615 aa16.96■□□□□ 0.31
SMPD4-216ENST00000461187 CTCFLQ8NI51 663 aaPredicted RBP16.96■□□□□ 0.31
SMPD4-216ENST00000461187 GDPD5Q8WTR4 605 aa16.96■□□□□ 0.31
SMPD4-216ENST00000461187 RRP36Q96EU6 259 aaKnown RBP16.96■□□□□ 0.31
SMPD4-216ENST00000461187 NECAB3Q96P71 396 aaPredicted RBP16.96■□□□□ 0.31
SMPD4-216ENST00000461187 MTA3Q9BTC8 594 aa16.96■□□□□ 0.31
SMPD4-216ENST00000461187 USP26Q9BXU7 913 aa16.96■□□□□ 0.31
SMPD4-216ENST00000461187 TELO2Q9Y4R8 837 aa16.96■□□□□ 0.31
SMPD4-216ENST00000461187 LINC01553A4QN01 128 aa16.95■□□□□ 0.3
SMPD4-216ENST00000461187 PRC1O43663 620 aa16.95■□□□□ 0.3
SMPD4-216ENST00000461187 PLEKHA8P1O95397 391 aa16.95■□□□□ 0.3
SMPD4-216ENST00000461187 KIF5BP33176 963 aa16.95■□□□□ 0.3
SMPD4-216ENST00000461187 ERVK-21P61565 698 aa16.95■□□□□ 0.3
SMPD4-216ENST00000461187 PLEKHG4Q58EX7 1191 aa16.95■□□□□ 0.3
SMPD4-216ENST00000461187 PCNX4Q63HM2 1172 aa16.95■□□□□ 0.3
SMPD4-216ENST00000461187 FAM117BQ6P1L5 589 aa16.95■□□□□ 0.3
SMPD4-216ENST00000461187 CASC1Q6TDU7 716 aa16.95■□□□□ 0.3
SMPD4-216ENST00000461187 SRBD1Q8N5C6 995 aaKnown RBP16.95■□□□□ 0.3
SMPD4-216ENST00000461187 SMARCC2Q8TAQ2 1214 aa16.95■□□□□ 0.3
SMPD4-216ENST00000461187 CUL5Q93034 780 aa16.95■□□□□ 0.3
SMPD4-216ENST00000461187 TGS1Q96RS0 853 aaKnown RBP16.95■□□□□ 0.3
SMPD4-216ENST00000461187 LZTS2Q9BRK4 669 aa16.95■□□□□ 0.3
SMPD4-216ENST00000461187 LSG1Q9H089 658 aaKnown RBP16.95■□□□□ 0.3
SMPD4-216ENST00000461187 COG5Q9UP83 839 aa16.95■□□□□ 0.3
SMPD4-216ENST00000461187 KIAA1671Q9BY89 1806 aa16.94■□□□□ 0.3
SMPD4-216ENST00000461187 SH2B2O14492 632 aaPredicted RBP16.94■□□□□ 0.3
SMPD4-216ENST00000461187 XRRA1Q6P2D8 792 aa16.94■□□□□ 0.3
SMPD4-216ENST00000461187 TRIM50Q86XT4 487 aa16.94■□□□□ 0.3
SMPD4-216ENST00000461187 TMTC2Q8N394 836 aa16.94■□□□□ 0.3
SMPD4-216ENST00000461187 SENP7Q9BQF6 1050 aa16.94■□□□□ 0.3
SMPD4-216ENST00000461187 OSBPL7Q9BZF2 842 aa16.94■□□□□ 0.3
SMPD4-216ENST00000461187 SUGCTQ9HAC7 445 aa16.94■□□□□ 0.3
SMPD4-216ENST00000461187 LMCD1Q9NZU5 365 aa16.94■□□□□ 0.3
SMPD4-216ENST00000461187 SEC63Q9UGP8 760 aaKnown RBP16.94■□□□□ 0.3
SMPD4-216ENST00000461187 MTUS1Q9ULD2 1270 aa16.94■□□□□ 0.3
SMPD4-216ENST00000461187 MCM5P33992 734 aa16.93■□□□□ 0.3
SMPD4-216ENST00000461187 GNAQP50148 359 aa16.93■□□□□ 0.3
SMPD4-216ENST00000461187 ADAM17P78536 824 aa16.93■□□□□ 0.3
SMPD4-216ENST00000461187 CMTR1Q8N1G2 835 aaKnown RBP16.93■□□□□ 0.3
SMPD4-216ENST00000461187 HLA-CQ95604 372 aa16.93■□□□□ 0.3
SMPD4-216ENST00000461187 TMEM87BQ96K49 555 aa16.93■□□□□ 0.3
SMPD4-216ENST00000461187 SETD4Q9NVD3 440 aa16.93■□□□□ 0.3
SMPD4-216ENST00000461187 INSL6Q9Y581 213 aa16.93■□□□□ 0.3
SMPD4-216ENST00000461187 COL4A6Q14031 1691 aa16.92■□□□□ 0.3
SMPD4-216ENST00000461187 CCDC69A6NI79 296 aa16.92■□□□□ 0.3
SMPD4-216ENST00000461187 SLC27A2O14975 620 aa16.92■□□□□ 0.3
SMPD4-216ENST00000461187 CAND2O75155 1236 aa16.92■□□□□ 0.3
SMPD4-216ENST00000461187 AMHP03971 560 aa16.92■□□□□ 0.3
SMPD4-216ENST00000461187 GNAT1P11488 350 aa16.92■□□□□ 0.3
SMPD4-216ENST00000461187 RXRAP19793 462 aa16.92■□□□□ 0.3
SMPD4-216ENST00000461187 LIFRP42702 1097 aa16.92■□□□□ 0.3
SMPD4-216ENST00000461187 HTRA4P83105 476 aaPredicted RBP16.92■□□□□ 0.3
SMPD4-216ENST00000461187 UTP14CQ5TAP6 766 aaKnown RBP16.92■□□□□ 0.3
SMPD4-216ENST00000461187 NFXL1Q6ZNB6 911 aa16.92■□□□□ 0.3
SMPD4-216ENST00000461187 MYOCDQ8IZQ8 938 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms