RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 MFSD6Q6ZSS7 791 aa20.07■□□□□ 0.8
TOP3A-202ENST00000461127 CPVLQ9H3G5 476 aa20.07■□□□□ 0.8
TOP3A-202ENST00000461127 IGFLR1Q9H665 355 aa20.07■□□□□ 0.8
TOP3A-202ENST00000461127 ZDBF2Q9HCK1 2354 aa20.07■□□□□ 0.8
TOP3A-202ENST00000461127 RBAK-RBAKDNI3L0D1 243 aa20.06■□□□□ 0.8
TOP3A-202ENST00000461127 DHX16O60231 1041 aaKnown RBP20.06■□□□□ 0.8
TOP3A-202ENST00000461127 GGPS1O95749 300 aa20.06■□□□□ 0.8
TOP3A-202ENST00000461127 GNAT1P11488 350 aa20.06■□□□□ 0.8
TOP3A-202ENST00000461127 NDUFV1P49821 464 aa20.06■□□□□ 0.8
TOP3A-202ENST00000461127 HSDL1Q3SXM5 330 aa20.06■□□□□ 0.8
TOP3A-202ENST00000461127 IER5LQ5T953 404 aa20.06■□□□□ 0.8
TOP3A-202ENST00000461127 USP34Q70CQ2 3546 aa20.06■□□□□ 0.8
TOP3A-202ENST00000461127 IRF2BPLQ9H1B7 796 aa20.06■□□□□ 0.8
TOP3A-202ENST00000461127 HELLSQ9NRZ9 838 aa20.06■□□□□ 0.8
TOP3A-202ENST00000461127 H3BRB1 525 aa20.05■□□□□ 0.8
TOP3A-202ENST00000461127 GRM6O15303 877 aa20.05■□□□□ 0.8
TOP3A-202ENST00000461127 SORBS3O60504 671 aa20.05■□□□□ 0.8
TOP3A-202ENST00000461127 TBX10O75333 385 aa20.05■□□□□ 0.8
TOP3A-202ENST00000461127 CFBP00751 764 aa20.05■□□□□ 0.8
TOP3A-202ENST00000461127 SMIM10L2AP0DMW4 78 aa20.05■□□□□ 0.8
TOP3A-202ENST00000461127 SMIM10L2BP0DMW5 78 aa20.05■□□□□ 0.8
TOP3A-202ENST00000461127 MYCLP12524 364 aaPredicted RBP20.05■□□□□ 0.8
TOP3A-202ENST00000461127 FOXK2Q01167 660 aa20.05■□□□□ 0.8
TOP3A-202ENST00000461127 ADGRF4Q8IZF3 695 aa20.05■□□□□ 0.8
TOP3A-202ENST00000461127 C16orf70Q9BSU1 422 aa20.05■□□□□ 0.8
TOP3A-202ENST00000461127 TUT1Q9H6E5 874 aaKnown RBP20.05■□□□□ 0.8
TOP3A-202ENST00000461127 MLXIPQ9HAP2 919 aa20.05■□□□□ 0.8
TOP3A-202ENST00000461127 MYH6P13533 1939 aa20.05■□□□□ 0.8
TOP3A-202ENST00000461127 CCDC171Q6TFL3 1326 aa20.04■□□□□ 0.8
TOP3A-202ENST00000461127 TREHO43280 583 aa20.04■□□□□ 0.8
TOP3A-202ENST00000461127 GFRA3O60609 400 aa20.04■□□□□ 0.8
TOP3A-202ENST00000461127 TGFB3P10600 412 aa20.04■□□□□ 0.8
TOP3A-202ENST00000461127 HOXC8P31273 242 aa20.04■□□□□ 0.8
TOP3A-202ENST00000461127 QRICH1Q2TAL8 776 aa20.04■□□□□ 0.8
TOP3A-202ENST00000461127 FBXL6Q8N531 539 aa20.04■□□□□ 0.8
TOP3A-202ENST00000461127 RNPEPQ9H4A4 650 aa20.04■□□□□ 0.8
TOP3A-202ENST00000461127 RNF41Q9H4P4 317 aaPredicted RBP20.04■□□□□ 0.8
TOP3A-202ENST00000461127 CFAP54Q96N23 3096 aa20.04■□□□□ 0.8
TOP3A-202ENST00000461127 ADGRA3Q8IWK6 1321 aa20.03■□□□□ 0.8
TOP3A-202ENST00000461127 MMP1P03956 469 aa20.03■□□□□ 0.8
TOP3A-202ENST00000461127 MX1P20591 662 aa20.03■□□□□ 0.8
TOP3A-202ENST00000461127 HAND2P61296 217 aa20.03■□□□□ 0.8
TOP3A-202ENST00000461127 ASPRV1Q53RT3 343 aa20.03■□□□□ 0.8
TOP3A-202ENST00000461127 CCDC178Q5BJE1 867 aa20.03■□□□□ 0.8
TOP3A-202ENST00000461127 DGKHQ86XP1 1220 aa20.03■□□□□ 0.8
TOP3A-202ENST00000461127 PNMA1Q8ND90 353 aa20.03■□□□□ 0.8
TOP3A-202ENST00000461127 ESR2Q92731 530 aa20.03■□□□□ 0.8
TOP3A-202ENST00000461127 CLP1Q92989 425 aaKnown RBP20.03■□□□□ 0.8
TOP3A-202ENST00000461127 PDCD2LQ9BRP1 358 aa20.03■□□□□ 0.8
TOP3A-202ENST00000461127 PLVAPQ9BX97 442 aa20.03■□□□□ 0.8
TOP3A-202ENST00000461127 ATG2AQ2TAZ0 1938 aa20.03■□□□□ 0.8
TOP3A-202ENST00000461127 ZMYM6O95789 1325 aa20.02■□□□□ 0.8
TOP3A-202ENST00000461127 CACNA1HO95180 2353 aa20.02■□□□□ 0.8
TOP3A-202ENST00000461127 NOP56O00567 594 aaKnown RBP20.02■□□□□ 0.8
TOP3A-202ENST00000461127 CSPG5O95196 566 aa20.02■□□□□ 0.8
TOP3A-202ENST00000461127 EYA4O95677 639 aa20.02■□□□□ 0.8
TOP3A-202ENST00000461127 UBA1P22314 1058 aaKnown RBP20.02■□□□□ 0.8
TOP3A-202ENST00000461127 GTF2F1P35269 517 aaKnown RBP eCLIP20.02■□□□□ 0.8
TOP3A-202ENST00000461127 ZXDAP98168 799 aa20.02■□□□□ 0.8
TOP3A-202ENST00000461127 TCF15Q12870 199 aa20.02■□□□□ 0.8
TOP3A-202ENST00000461127 ADAM15Q13444 863 aa20.02■□□□□ 0.8
TOP3A-202ENST00000461127 EVI5LQ96CN4 794 aa20.02■□□□□ 0.8
TOP3A-202ENST00000461127 USP26Q9BXU7 913 aa20.02■□□□□ 0.8
TOP3A-202ENST00000461127 KAT14Q9H8E8 782 aa20.02■□□□□ 0.8
TOP3A-202ENST00000461127 MAP3K20Q9NYL2 800 aaKnown RBP20.02■□□□□ 0.8
TOP3A-202ENST00000461127 ZFHX2Q9C0A1 2572 aaPredicted RBP20.02■□□□□ 0.8
TOP3A-202ENST00000461127 LINC01565O15544 149 aa20.01■□□□□ 0.79
TOP3A-202ENST00000461127 RGS20O76081 388 aa20.01■□□□□ 0.79
TOP3A-202ENST00000461127 LGALS2P05162 132 aa20.01■□□□□ 0.79
TOP3A-202ENST00000461127 HSD17B4P51659 736 aa20.01■□□□□ 0.79
TOP3A-202ENST00000461127 BTG3Q14201 252 aaPredicted RBP20.01■□□□□ 0.79
TOP3A-202ENST00000461127 IQCA1Q86XH1 822 aa20.01■□□□□ 0.79
TOP3A-202ENST00000461127 OTUD7AQ8TE49 926 aaPredicted RBP20.01■□□□□ 0.79
TOP3A-202ENST00000461127 MSLNLQ96KJ4 702 aa20.01■□□□□ 0.79
TOP3A-202ENST00000461127 ZKSCAN3Q9BRR0 538 aa20.01■□□□□ 0.79
TOP3A-202ENST00000461127 OSBPL7Q9BZF2 842 aa20.01■□□□□ 0.79
TOP3A-202ENST00000461127 VAT1LQ9HCJ6 419 aa20.01■□□□□ 0.79
TOP3A-202ENST00000461127 CCND2P30279 289 aa20■□□□□ 0.79
TOP3A-202ENST00000461127 MCMDC2Q4G0Z9 681 aa20■□□□□ 0.79
TOP3A-202ENST00000461127 FAM26DQ5JW98 314 aa20■□□□□ 0.79
TOP3A-202ENST00000461127 STOX1Q6ZVD7 989 aa20■□□□□ 0.79
TOP3A-202ENST00000461127 VSIG10LQ86VR7 867 aa20■□□□□ 0.79
TOP3A-202ENST00000461127 AMNQ9BXJ7 453 aa20■□□□□ 0.79
TOP3A-202ENST00000461127 ALG13Q9NP73 1137 aaKnown RBP20■□□□□ 0.79
TOP3A-202ENST00000461127 SETD4Q9NVD3 440 aa20■□□□□ 0.79
TOP3A-202ENST00000461127 ZNF215Q9UL58 517 aaPredicted RBP20■□□□□ 0.79
TOP3A-202ENST00000461127 GTF3C3Q9Y5Q9 886 aa20■□□□□ 0.79
TOP3A-202ENST00000461127 PTPRZ1P23471 2315 aaPredicted RBP19.99■□□□□ 0.79
TOP3A-202ENST00000461127 LOC730098B7Z3J9 87 aa19.99■□□□□ 0.79
TOP3A-202ENST00000461127 PARP1P09874 1014 aaKnown RBP19.99■□□□□ 0.79
TOP3A-202ENST00000461127 LINC00271P0C7V0 271 aa19.99■□□□□ 0.79
TOP3A-202ENST00000461127 NT5C2P49902 561 aa19.99■□□□□ 0.79
TOP3A-202ENST00000461127 SP2Q02086 613 aa19.99■□□□□ 0.79
TOP3A-202ENST00000461127 SIGLEC14Q08ET2 396 aa19.99■□□□□ 0.79
TOP3A-202ENST00000461127 PGM5Q15124 567 aa19.99■□□□□ 0.79
TOP3A-202ENST00000461127 SAMD3Q8N6K7 520 aa19.99■□□□□ 0.79
TOP3A-202ENST00000461127 SMRP1Q8NCR6 262 aa19.99■□□□□ 0.79
TOP3A-202ENST00000461127 EXOC6Q8TAG9 804 aa19.99■□□□□ 0.79
TOP3A-202ENST00000461127 ATOH1Q92858 354 aaPredicted RBP19.99■□□□□ 0.79
TOP3A-202ENST00000461127 P2RX5Q93086 422 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms