RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 CELF3Q5SZQ8 465 aaKnown RBP25.5■■□□□ 1.67
C9orf3-209ENST00000460573 PPP4R3AQ6IN85 833 aa25.5■■□□□ 1.67
C9orf3-209ENST00000460573 COPS5Q92905 334 aa25.5■■□□□ 1.67
C9orf3-209ENST00000460573 MLXIPQ9HAP2 919 aa25.5■■□□□ 1.67
C9orf3-209ENST00000460573 FOXD4L1Q9NU39 408 aa25.5■■□□□ 1.67
C9orf3-209ENST00000460573 ARHGAP1Q07960 439 aa25.49■■□□□ 1.67
C9orf3-209ENST00000460573 FSCN1Q16658 493 aaKnown RBP25.49■■□□□ 1.67
C9orf3-209ENST00000460573 LETM2Q2VYF4 491 aa25.49■■□□□ 1.67
C9orf3-209ENST00000460573 Q4G0T1 1027 aa25.49■■□□□ 1.67
C9orf3-209ENST00000460573 PRR16Q569H4 304 aa25.49■■□□□ 1.67
C9orf3-209ENST00000460573 GNASQ5JWF2 1037 aa25.49■■□□□ 1.67
C9orf3-209ENST00000460573 MYSM1Q5VVJ2 828 aa25.49■■□□□ 1.67
C9orf3-209ENST00000460573 MBOAT7Q96N66 472 aa25.49■■□□□ 1.67
C9orf3-209ENST00000460573 MOXD2PA6NHM9 499 aa25.48■■□□□ 1.67
C9orf3-209ENST00000460573 A6NJR5 290 aa25.48■■□□□ 1.67
C9orf3-209ENST00000460573 CTAGE5O15320 804 aa25.48■■□□□ 1.67
C9orf3-209ENST00000460573 ARP10275 920 aa25.48■■□□□ 1.67
C9orf3-209ENST00000460573 KCNA2P16389 499 aa25.48■■□□□ 1.67
C9orf3-209ENST00000460573 RTP1P59025 263 aa25.48■■□□□ 1.67
C9orf3-209ENST00000460573 MCTP1Q6DN14 999 aa25.48■■□□□ 1.67
C9orf3-209ENST00000460573 CCSAPQ6IQ19 270 aaPredicted RBP25.48■■□□□ 1.67
C9orf3-209ENST00000460573 METTL7BQ6UX53 244 aa25.48■■□□□ 1.67
C9orf3-209ENST00000460573 FERMT2Q96AC1 680 aa25.48■■□□□ 1.67
C9orf3-209ENST00000460573 GDF15Q99988 308 aa25.48■■□□□ 1.67
C9orf3-209ENST00000460573 PRO3102Q9H379 93 aa25.48■■□□□ 1.67
C9orf3-209ENST00000460573 AGO4Q9HCK5 861 aaKnown RBP25.48■■□□□ 1.67
C9orf3-209ENST00000460573 NFASCO94856 1347 aa25.47■■□□□ 1.67
C9orf3-209ENST00000460573 ATP9AO75110 1047 aa25.47■■□□□ 1.67
C9orf3-209ENST00000460573 SYT1P21579 422 aa25.47■■□□□ 1.67
C9orf3-209ENST00000460573 BMP8BP34820 402 aa25.47■■□□□ 1.67
C9orf3-209ENST00000460573 MDM2Q00987 491 aaPredicted RBP25.47■■□□□ 1.67
C9orf3-209ENST00000460573 KCNA10Q16322 511 aa25.47■■□□□ 1.67
C9orf3-209ENST00000460573 PPTC7Q8NI37 304 aa25.47■■□□□ 1.67
C9orf3-209ENST00000460573 PRDM5Q9NQX1 630 aaPredicted RBP25.47■■□□□ 1.67
C9orf3-209ENST00000460573 PHF24Q9UPV7 400 aa25.47■■□□□ 1.67
C9orf3-209ENST00000460573 MYADML2A6NDP7 307 aa25.46■■□□□ 1.67
C9orf3-209ENST00000460573 FAM205CA6NFA0 338 aa25.46■■□□□ 1.67
C9orf3-209ENST00000460573 CCNT1O60563 726 aaKnown RBP25.46■■□□□ 1.67
C9orf3-209ENST00000460573 KPNA6O60684 536 aa25.46■■□□□ 1.67
C9orf3-209ENST00000460573 TRAPPC10P48553 1259 aa25.46■■□□□ 1.67
C9orf3-209ENST00000460573 CYFIP1Q7L576 1253 aa25.46■■□□□ 1.67
C9orf3-209ENST00000460573 LENG9Q96B70 501 aa25.46■■□□□ 1.67
C9orf3-209ENST00000460573 SDF4Q9BRK5 362 aa25.46■■□□□ 1.67
C9orf3-209ENST00000460573 ZNF577Q9BSK1 485 aa25.46■■□□□ 1.67
C9orf3-209ENST00000460573 TBC1D22BQ9NU19 505 aa25.46■■□□□ 1.67
C9orf3-209ENST00000460573 POLR3EQ9NVU0 708 aa25.46■■□□□ 1.67
C9orf3-209ENST00000460573 DDX25Q9UHL0 483 aaKnown RBP25.46■■□□□ 1.67
C9orf3-209ENST00000460573 NOL7Q9UMY1 257 aaKnown RBP25.46■■□□□ 1.67
C9orf3-209ENST00000460573 KIF28PB7ZC32 967 aa25.45■■□□□ 1.66
C9orf3-209ENST00000460573 IPO5O00410 1097 aaKnown RBP25.45■■□□□ 1.66
C9orf3-209ENST00000460573 CABYRO75952 493 aa25.45■■□□□ 1.66
C9orf3-209ENST00000460573 TDP2O95551 362 aa25.45■■□□□ 1.66
C9orf3-209ENST00000460573 BEX3Q00994 111 aa25.45■■□□□ 1.66
C9orf3-209ENST00000460573 SLC39A5Q6ZMH5 540 aa25.45■■□□□ 1.66
C9orf3-209ENST00000460573 AFG1LQ8WV93 481 aa25.45■■□□□ 1.66
C9orf3-209ENST00000460573 SPATA33Q96N06 139 aa25.45■■□□□ 1.66
C9orf3-209ENST00000460573 VPS37CA5D8V6 355 aaPredicted RBP25.44■■□□□ 1.66
C9orf3-209ENST00000460573 ASGR1P07306 291 aa25.44■■□□□ 1.66
C9orf3-209ENST00000460573 PTGS1P23219 599 aa25.44■■□□□ 1.66
C9orf3-209ENST00000460573 ACLYP53396 1101 aa25.44■■□□□ 1.66
C9orf3-209ENST00000460573 ORC2Q13416 577 aaPredicted RBP25.44■■□□□ 1.66
C9orf3-209ENST00000460573 DGKDQ16760 1214 aa25.44■■□□□ 1.66
C9orf3-209ENST00000460573 TDHQ8IZJ6 230 aa25.44■■□□□ 1.66
C9orf3-209ENST00000460573 NOP56O00567 594 aaKnown RBP25.43■■□□□ 1.66
C9orf3-209ENST00000460573 TBX3O15119 743 aa25.43■■□□□ 1.66
C9orf3-209ENST00000460573 STX6O43752 255 aa25.43■■□□□ 1.66
C9orf3-209ENST00000460573 PPFIA4O75335 1185 aa25.43■■□□□ 1.66
C9orf3-209ENST00000460573 MMP3P08254 477 aa25.43■■□□□ 1.66
C9orf3-209ENST00000460573 IRX5P78411 483 aaPredicted RBP25.43■■□□□ 1.66
C9orf3-209ENST00000460573 BRAPQ7Z569 592 aa25.43■■□□□ 1.66
C9orf3-209ENST00000460573 RIT2Q99578 217 aa25.43■■□□□ 1.66
C9orf3-209ENST00000460573 JPH1Q9HDC5 661 aaPredicted RBP25.43■■□□□ 1.66
C9orf3-209ENST00000460573 PKD2L1Q9P0L9 805 aa25.43■■□□□ 1.66
C9orf3-209ENST00000460573 SLC9A2Q9UBY0 812 aa25.43■■□□□ 1.66
C9orf3-209ENST00000460573 MSH4O15457 936 aa25.42■■□□□ 1.66
C9orf3-209ENST00000460573 HOXD8P13378 290 aaPredicted RBP25.42■■□□□ 1.66
C9orf3-209ENST00000460573 ITGB3BPQ13352 177 aaPredicted RBP25.42■■□□□ 1.66
C9orf3-209ENST00000460573 HSDL1Q3SXM5 330 aa25.42■■□□□ 1.66
C9orf3-209ENST00000460573 TRIM60Q495X7 471 aa25.42■■□□□ 1.66
C9orf3-209ENST00000460573 RILPL1Q5EBL4 403 aa25.42■■□□□ 1.66
C9orf3-209ENST00000460573 GLT1D1Q96MS3 346 aa25.42■■□□□ 1.66
C9orf3-209ENST00000460573 BCAS3Q9H6U6 928 aa25.42■■□□□ 1.66
C9orf3-209ENST00000460573 TCEAL9Q9UHQ7 104 aa25.42■■□□□ 1.66
C9orf3-209ENST00000460573 SPRYD3Q8NCJ5 442 aa25.41■■□□□ 1.66
C9orf3-209ENST00000460573 SEPT1Q8WYJ6 367 aa25.41■■□□□ 1.66
C9orf3-209ENST00000460573 SLC5A5Q92911 643 aa25.41■■□□□ 1.66
C9orf3-209ENST00000460573 FAM20AQ96MK3 541 aa25.41■■□□□ 1.66
C9orf3-209ENST00000460573 ELP1O95163 1332 aa25.4■■□□□ 1.66
C9orf3-209ENST00000460573 A0A1W2PQ45 241 aaPredicted RBP25.4■■□□□ 1.66
C9orf3-209ENST00000460573 A0A1W2PQY0 241 aa25.4■■□□□ 1.66
C9orf3-209ENST00000460573 DHX15O43143 795 aaKnown RBP25.4■■□□□ 1.66
C9orf3-209ENST00000460573 SLC37A4O43826 429 aa25.4■■□□□ 1.66
C9orf3-209ENST00000460573 SORBS3O60504 671 aa25.4■■□□□ 1.66
C9orf3-209ENST00000460573 BAG4O95429 457 aaKnown RBP25.4■■□□□ 1.66
C9orf3-209ENST00000460573 MYL3P08590 195 aa25.4■■□□□ 1.66
C9orf3-209ENST00000460573 PURAQ00577 322 aaKnown RBP25.4■■□□□ 1.66
C9orf3-209ENST00000460573 TTC38Q5R3I4 469 aa25.4■■□□□ 1.66
C9orf3-209ENST00000460573 ETNPPLQ8TBG4 499 aa25.4■■□□□ 1.66
C9orf3-209ENST00000460573 GPR20Q99678 358 aa25.4■■□□□ 1.66
C9orf3-209ENST00000460573 SEZ6LQ9BYH1 1024 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms