RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 SIRT5Q9NXA8 310 aa6.69□□□□□ -1.34
VBP1-202ENST00000460509 FAM53CQ9NYF3 392 aa6.69□□□□□ -1.34
VBP1-202ENST00000460509 NUB1Q9Y5A7 615 aa6.69□□□□□ -1.34
VBP1-202ENST00000460509 ZBTB7AO95365 584 aa6.68□□□□□ -1.34
VBP1-202ENST00000460509 LTFP02788 710 aa6.68□□□□□ -1.34
VBP1-202ENST00000460509 NCLP19338 710 aaKnown RBP6.68□□□□□ -1.34
VBP1-202ENST00000460509 VIPR1P32241 457 aa6.68□□□□□ -1.34
VBP1-202ENST00000460509 ZNF200P98182 395 aaPredicted RBP6.68□□□□□ -1.34
VBP1-202ENST00000460509 GRIN1Q05586 938 aa6.68□□□□□ -1.34
VBP1-202ENST00000460509 PKN3Q6P5Z2 889 aa6.68□□□□□ -1.34
VBP1-202ENST00000460509 NXPE1Q8N323 547 aa6.68□□□□□ -1.34
VBP1-202ENST00000460509 FMNL2Q96PY5 1086 aa6.68□□□□□ -1.34
VBP1-202ENST00000460509 MTFR1LQ9H019 292 aa6.68□□□□□ -1.34
VBP1-202ENST00000460509 ZNF552Q9H707 407 aaPredicted RBP6.68□□□□□ -1.34
VBP1-202ENST00000460509 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.68□□□□□ -1.34
VBP1-202ENST00000460509 MAPRE3Q9UPY8 281 aa6.68□□□□□ -1.34
VBP1-202ENST00000460509 ZKSCAN5Q9Y2L8 839 aa6.68□□□□□ -1.34
VBP1-202ENST00000460509 TCRBV5S4A2TA0A5A2 114 aa6.67□□□□□ -1.34
VBP1-202ENST00000460509 SCDO00767 359 aa6.67□□□□□ -1.34
VBP1-202ENST00000460509 TADA3O75528 432 aa6.67□□□□□ -1.34
VBP1-202ENST00000460509 AMY2AP04746 511 aa6.67□□□□□ -1.34
VBP1-202ENST00000460509 AMY2BP19961 511 aa6.67□□□□□ -1.34
VBP1-202ENST00000460509 STAT3P40763 770 aa6.67□□□□□ -1.34
VBP1-202ENST00000460509 SCNN1BP51168 640 aa6.67□□□□□ -1.34
VBP1-202ENST00000460509 STRN3Q13033 797 aa6.67□□□□□ -1.34
VBP1-202ENST00000460509 TUSC3Q13454 348 aa6.67□□□□□ -1.34
VBP1-202ENST00000460509 SLC9A5Q14940 896 aa6.67□□□□□ -1.34
VBP1-202ENST00000460509 SKOR2Q2VWA4 1001 aaPredicted RBP6.67□□□□□ -1.34
VBP1-202ENST00000460509 DDX46Q7L014 1031 aaKnown RBP6.67□□□□□ -1.34
VBP1-202ENST00000460509 CHST14Q8NCH0 376 aa6.67□□□□□ -1.34
VBP1-202ENST00000460509 UHMK1Q8TAS1 419 aaKnown RBP6.67□□□□□ -1.34
VBP1-202ENST00000460509 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.67□□□□□ -1.34
VBP1-202ENST00000460509 ZNF652Q9Y2D9 606 aa6.67□□□□□ -1.34
VBP1-202ENST00000460509 SLC12A8A0AV02 714 aa6.66□□□□□ -1.34
VBP1-202ENST00000460509 PTPDC1A2A3K4 754 aa6.66□□□□□ -1.34
VBP1-202ENST00000460509 FAM83GA6ND36 823 aa6.66□□□□□ -1.34
VBP1-202ENST00000460509 ZNF891A8MT65 544 aaPredicted RBP6.66□□□□□ -1.34
VBP1-202ENST00000460509 ZNF561-AS1K7EIQ3 104 aa6.66□□□□□ -1.34
VBP1-202ENST00000460509 CBX4O00257 560 aa6.66□□□□□ -1.34
VBP1-202ENST00000460509 TRAF5O00463 557 aa6.66□□□□□ -1.34
VBP1-202ENST00000460509 GAS7O60861 476 aa6.66□□□□□ -1.34
VBP1-202ENST00000460509 POU3F2P20265 443 aaPredicted RBP6.66□□□□□ -1.34
VBP1-202ENST00000460509 IBSPP21815 317 aaPredicted RBP6.66□□□□□ -1.34
VBP1-202ENST00000460509 YBX1P67809 324 aaKnown RBP6.66□□□□□ -1.34
VBP1-202ENST00000460509 LACTBP83111 547 aaPredicted RBP6.66□□□□□ -1.34
VBP1-202ENST00000460509 NFKB2Q00653 900 aa6.66□□□□□ -1.34
VBP1-202ENST00000460509 SEPT7Q16181 437 aaKnown RBP6.66□□□□□ -1.34
VBP1-202ENST00000460509 EMC4Q5J8M3 183 aa6.66□□□□□ -1.34
VBP1-202ENST00000460509 CPZQ66K79 652 aa6.66□□□□□ -1.34
VBP1-202ENST00000460509 KCTD1Q719H9 257 aa6.66□□□□□ -1.34
VBP1-202ENST00000460509 RNF180Q86T96 592 aa6.66□□□□□ -1.34
VBP1-202ENST00000460509 TRIM48Q8IWZ4 208 aa6.66□□□□□ -1.34
VBP1-202ENST00000460509 NLGN4XQ8N0W4 816 aa6.66□□□□□ -1.34
VBP1-202ENST00000460509 ARRDC4Q8NCT1 418 aa6.66□□□□□ -1.34
VBP1-202ENST00000460509 PHOSPHO1Q8TCT1 267 aa6.66□□□□□ -1.34
VBP1-202ENST00000460509 SH3RF2Q8TEC5 729 aa6.66□□□□□ -1.34
VBP1-202ENST00000460509 TMX1Q9H3N1 280 aa6.66□□□□□ -1.34
VBP1-202ENST00000460509 SMURF1Q9HCE7 757 aa6.66□□□□□ -1.34
VBP1-202ENST00000460509 RIC8BQ9NVN3 520 aa6.66□□□□□ -1.34
VBP1-202ENST00000460509 ASH2LQ9UBL3 628 aa6.66□□□□□ -1.34
VBP1-202ENST00000460509 SRPK3Q9UPE1 567 aa6.66□□□□□ -1.34
VBP1-202ENST00000460509 ATP23Q9Y6H3 246 aa6.66□□□□□ -1.34
VBP1-202ENST00000460509 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.66□□□□□ -1.34
VBP1-202ENST00000460509 TCRBV5S2A0A599 114 aa6.65□□□□□ -1.34
VBP1-202ENST00000460509 MAN2B1O00754 1011 aa6.65□□□□□ -1.34
VBP1-202ENST00000460509 TXKP42681 527 aa6.65□□□□□ -1.34
VBP1-202ENST00000460509 NCKAP1LP55160 1127 aa6.65□□□□□ -1.34
VBP1-202ENST00000460509 PTPROQ16827 1216 aa6.65□□□□□ -1.34
VBP1-202ENST00000460509 HABP4Q5JVS0 413 aaKnown RBP6.65□□□□□ -1.34
VBP1-202ENST00000460509 BTBD8Q5XKL5 378 aa6.65□□□□□ -1.34
VBP1-202ENST00000460509 CYP4F22Q6NT55 531 aa6.65□□□□□ -1.34
VBP1-202ENST00000460509 KRT26Q7Z3Y9 468 aa6.65□□□□□ -1.34
VBP1-202ENST00000460509 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.65□□□□□ -1.34
VBP1-202ENST00000460509 OR2W6PQ8NHA6 318 aa6.65□□□□□ -1.34
VBP1-202ENST00000460509 CLEC4DQ8WXI8 215 aa6.65□□□□□ -1.34
VBP1-202ENST00000460509 USP7Q93009 1102 aa6.65□□□□□ -1.34
VBP1-202ENST00000460509 DDX11Q96FC9 970 aa6.65□□□□□ -1.34
VBP1-202ENST00000460509 TSPAN17Q96FV3 270 aa6.65□□□□□ -1.34
VBP1-202ENST00000460509 GPR101Q96P66 508 aaPredicted RBP6.65□□□□□ -1.34
VBP1-202ENST00000460509 SGPP1Q9BX95 441 aa6.65□□□□□ -1.34
VBP1-202ENST00000460509 PLA2G2DQ9UNK4 145 aa6.65□□□□□ -1.34
VBP1-202ENST00000460509 RNF114Q9Y508 228 aa6.65□□□□□ -1.34
VBP1-202ENST00000460509 COL4A3BPQ9Y5P4 624 aa6.65□□□□□ -1.34
VBP1-202ENST00000460509 HIP1RO75146 1068 aa6.64□□□□□ -1.35
VBP1-202ENST00000460509 PMLP29590 882 aa6.64□□□□□ -1.35
VBP1-202ENST00000460509 IL2P60568 153 aa6.64□□□□□ -1.35
VBP1-202ENST00000460509 IRF9Q00978 393 aa6.64□□□□□ -1.35
VBP1-202ENST00000460509 ARHGAP44Q17R89 818 aa6.64□□□□□ -1.35
VBP1-202ENST00000460509 STRA8Q7Z7C7 330 aa6.64□□□□□ -1.35
VBP1-202ENST00000460509 ZCRB1Q8TBF4 217 aaKnown RBP6.64□□□□□ -1.35
VBP1-202ENST00000460509 MCOLN1Q9GZU1 580 aa6.64□□□□□ -1.35
VBP1-202ENST00000460509 THG1LQ9NWX6 298 aaKnown RBP6.64□□□□□ -1.35
VBP1-202ENST00000460509 B4GALT6Q9UBX8 382 aa6.64□□□□□ -1.35
VBP1-202ENST00000460509 TELO2Q9Y4R8 837 aa6.64□□□□□ -1.35
VBP1-202ENST00000460509 MYOCOSA0A1B0GUC4 107 aa6.63□□□□□ -1.35
VBP1-202ENST00000460509 F2P00734 622 aa6.63□□□□□ -1.35
VBP1-202ENST00000460509 VIL1P09327 827 aaKnown RBP6.63□□□□□ -1.35
VBP1-202ENST00000460509 STAT5AP42229 794 aa6.63□□□□□ -1.35
VBP1-202ENST00000460509 MECP2P51608 486 aaKnown RBP6.63□□□□□ -1.35
VBP1-202ENST00000460509 TMEM132BQ14DG7 1078 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms