RNA–Protein interactions for RNA: ENST00000460023.5

CCDC78-205, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-205ENST00000460023 AP3B2Q13367 1082 aa24.58■■□□□ 1.53
CCDC78-205ENST00000460023 PFKFB3Q16875 520 aaPredicted RBP24.58■■□□□ 1.53
CCDC78-205ENST00000460023 SCLYQ96I15 445 aa24.58■■□□□ 1.53
CCDC78-205ENST00000460023 UBIAD1Q9Y5Z9 338 aa24.58■■□□□ 1.53
CCDC78-205ENST00000460023 CYP46A1Q9Y6A2 500 aa24.58■■□□□ 1.53
CCDC78-205ENST00000460023 STXBP3O00186 592 aa24.57■■□□□ 1.52
CCDC78-205ENST00000460023 PRPF3O43395 683 aaKnown RBP24.57■■□□□ 1.52
CCDC78-205ENST00000460023 ZNF286BP0CG31 522 aa24.57■■□□□ 1.52
CCDC78-205ENST00000460023 SEMA3FQ13275 785 aa24.57■■□□□ 1.52
CCDC78-205ENST00000460023 MTMR1Q13613 665 aa24.57■■□□□ 1.52
CCDC78-205ENST00000460023 UBE2SQ16763 222 aa24.57■■□□□ 1.52
CCDC78-205ENST00000460023 GPR20Q99678 358 aa24.57■■□□□ 1.52
CCDC78-205ENST00000460023 JADE2Q9NQC1 790 aa24.57■■□□□ 1.52
CCDC78-205ENST00000460023 ZNF215Q9UL58 517 aaPredicted RBP24.57■■□□□ 1.52
CCDC78-205ENST00000460023 LGALS2P05162 132 aa24.56■■□□□ 1.52
CCDC78-205ENST00000460023 GNAT1P11488 350 aa24.56■■□□□ 1.52
CCDC78-205ENST00000460023 SCG2P13521 617 aa24.56■■□□□ 1.52
CCDC78-205ENST00000460023 RAB30Q15771 203 aa24.56■■□□□ 1.52
CCDC78-205ENST00000460023 OTOP2Q7RTS6 562 aa24.56■■□□□ 1.52
CCDC78-205ENST00000460023 SLC4A7Q9Y6M7 1214 aa24.56■■□□□ 1.52
CCDC78-205ENST00000460023 LAMA2P24043 3122 aaKnown RBP24.55■■□□□ 1.52
CCDC78-205ENST00000460023 ESYT2A0FGR8 921 aa24.55■■□□□ 1.52
CCDC78-205ENST00000460023 SELPP16109 830 aa24.55■■□□□ 1.52
CCDC78-205ENST00000460023 ITGB5P18084 799 aa24.55■■□□□ 1.52
CCDC78-205ENST00000460023 DNAJB2P25686 324 aa24.55■■□□□ 1.52
CCDC78-205ENST00000460023 GNA11P29992 359 aa24.55■■□□□ 1.52
CCDC78-205ENST00000460023 RNF26Q9BY78 433 aaPredicted RBP24.55■■□□□ 1.52
CCDC78-205ENST00000460023 C6orf50Q9HD87 102 aa24.55■■□□□ 1.52
CCDC78-205ENST00000460023 MSRAQ9UJ68 235 aa24.55■■□□□ 1.52
CCDC78-205ENST00000460023 SORBS3O60504 671 aa24.54■■□□□ 1.52
CCDC78-205ENST00000460023 TYW1BQ6NUM6 668 aa24.54■■□□□ 1.52
CCDC78-205ENST00000460023 SEPT1Q8WYJ6 367 aa24.54■■□□□ 1.52
CCDC78-205ENST00000460023 CTAGE1Q96RT6 745 aa24.54■■□□□ 1.52
CCDC78-205ENST00000460023 MXRA8Q9BRK3 442 aa24.54■■□□□ 1.52
CCDC78-205ENST00000460023 ZMYND12Q9H0C1 365 aa24.54■■□□□ 1.52
CCDC78-205ENST00000460023 C17orf102A2RUQ5 167 aa24.53■■□□□ 1.52
CCDC78-205ENST00000460023 KCNA2P16389 499 aa24.53■■□□□ 1.52
CCDC78-205ENST00000460023 IFNAR1P17181 557 aa24.53■■□□□ 1.52
CCDC78-205ENST00000460023 PDIA3P30101 505 aaKnown RBP24.53■■□□□ 1.52
CCDC78-205ENST00000460023 CLK2P49760 499 aaKnown RBP24.53■■□□□ 1.52
CCDC78-205ENST00000460023 DEFB128Q7Z7B8 93 aa24.53■■□□□ 1.52
CCDC78-205ENST00000460023 PHOSPHO2Q8TCD6 241 aa24.53■■□□□ 1.52
CCDC78-205ENST00000460023 PPP1R13LQ8WUF5 828 aa24.53■■□□□ 1.52
CCDC78-205ENST00000460023 TIFAQ96CG3 184 aa24.53■■□□□ 1.52
CCDC78-205ENST00000460023 ZNF274Q96GC6 653 aaPredicted RBP24.53■■□□□ 1.52
CCDC78-205ENST00000460023 ANO3Q9BYT9 981 aa24.53■■□□□ 1.52
CCDC78-205ENST00000460023 FTOQ9C0B1 505 aaKnown RBP eCLIP24.53■■□□□ 1.52
CCDC78-205ENST00000460023 BAIAP3O94812 1187 aa24.52■■□□□ 1.52
CCDC78-205ENST00000460023 CKBP12277 381 aa24.52■■□□□ 1.52
CCDC78-205ENST00000460023 CEP55Q53EZ4 464 aa24.52■■□□□ 1.52
CCDC78-205ENST00000460023 LRRC8DQ7L1W4 858 aa24.52■■□□□ 1.52
CCDC78-205ENST00000460023 BICD2Q8TD16 824 aa24.52■■□□□ 1.52
CCDC78-205ENST00000460023 TNPO1Q92973 898 aaKnown RBP24.52■■□□□ 1.52
CCDC78-205ENST00000460023 FAM161BQ96MY7 647 aa24.52■■□□□ 1.52
CCDC78-205ENST00000460023 GUCD1Q96NT3 240 aa24.52■■□□□ 1.52
CCDC78-205ENST00000460023 PBX4Q9BYU1 374 aa24.52■■□□□ 1.52
CCDC78-205ENST00000460023 BCAS3Q9H6U6 928 aa24.52■■□□□ 1.52
CCDC78-205ENST00000460023 CXXC1Q9P0U4 656 aaPredicted RBP24.52■■□□□ 1.52
CCDC78-205ENST00000460023 ZBBXA8MT70 800 aa24.51■■□□□ 1.51
CCDC78-205ENST00000460023 ATP9AO75110 1047 aa24.51■■□□□ 1.51
CCDC78-205ENST00000460023 HOXC8P31273 242 aa24.51■■□□□ 1.51
CCDC78-205ENST00000460023 SREBF1P36956 1147 aa24.51■■□□□ 1.51
CCDC78-205ENST00000460023 NTRK3Q16288 839 aa24.51■■□□□ 1.51
CCDC78-205ENST00000460023 CPLX2Q6PUV4 134 aaKnown RBP24.51■■□□□ 1.51
CCDC78-205ENST00000460023 SERINC5Q86VE9 423 aa24.51■■□□□ 1.51
CCDC78-205ENST00000460023 TRIM22Q8IYM9 498 aa24.51■■□□□ 1.51
CCDC78-205ENST00000460023 CCDC148Q8NFR7 591 aa24.51■■□□□ 1.51
CCDC78-205ENST00000460023 ATP6V0A1Q93050 837 aa24.51■■□□□ 1.51
CCDC78-205ENST00000460023 VWCEQ96DN2 955 aa24.51■■□□□ 1.51
CCDC78-205ENST00000460023 CDX2Q99626 313 aaPredicted RBP24.51■■□□□ 1.51
CCDC78-205ENST00000460023 TTYH1Q9H313 450 aaPredicted RBP24.51■■□□□ 1.51
CCDC78-205ENST00000460023 ZNF576Q9H609 170 aa24.51■■□□□ 1.51
CCDC78-205ENST00000460023 KCNH7Q9NS40 1196 aa24.51■■□□□ 1.51
CCDC78-205ENST00000460023 TRIP12Q14669 1992 aaPredicted RBP24.51■■□□□ 1.51
CCDC78-205ENST00000460023 CAND2O75155 1236 aa24.5■■□□□ 1.51
CCDC78-205ENST00000460023 SMIM10L2AP0DMW4 78 aa24.5■■□□□ 1.51
CCDC78-205ENST00000460023 SMIM10L2BP0DMW5 78 aa24.5■■□□□ 1.51
CCDC78-205ENST00000460023 TCF7P36402 384 aaPredicted RBP24.5■■□□□ 1.51
CCDC78-205ENST00000460023 ZNF76P36508 570 aa24.5■■□□□ 1.51
CCDC78-205ENST00000460023 ANAPC15P60006 121 aa24.5■■□□□ 1.51
CCDC78-205ENST00000460023 NIPA1Q7RTP0 329 aa24.5■■□□□ 1.51
CCDC78-205ENST00000460023 SLC9A7Q96T83 725 aa24.5■■□□□ 1.51
CCDC78-205ENST00000460023 SDF4Q9BRK5 362 aa24.5■■□□□ 1.51
CCDC78-205ENST00000460023 RNPEPQ9H4A4 650 aa24.5■■□□□ 1.51
CCDC78-205ENST00000460023 SH3GLB2Q9NR46 395 aa24.5■■□□□ 1.51
CCDC78-205ENST00000460023 NRCAMQ92823 1304 aa24.5■■□□□ 1.51
CCDC78-205ENST00000460023 EFCAB14O75071 495 aa24.49■■□□□ 1.51
CCDC78-205ENST00000460023 TOB2Q14106 344 aaPredicted RBP24.49■■□□□ 1.51
CCDC78-205ENST00000460023 PKN1Q16512 942 aa24.49■■□□□ 1.51
CCDC78-205ENST00000460023 FAM177A1Q8N128 213 aaPredicted RBP24.49■■□□□ 1.51
CCDC78-205ENST00000460023 DHX38Q92620 1227 aaKnown RBP24.49■■□□□ 1.51
CCDC78-205ENST00000460023 SMARCAD1Q9H4L7 1026 aa24.49■■□□□ 1.51
CCDC78-205ENST00000460023 JPH1Q9HDC5 661 aaPredicted RBP24.49■■□□□ 1.51
CCDC78-205ENST00000460023 ERAP1Q9NZ08 941 aa24.49■■□□□ 1.51
CCDC78-205ENST00000460023 NFASCO94856 1347 aa24.49■■□□□ 1.51
CCDC78-205ENST00000460023 EMSYQ7Z589 1322 aa24.49■■□□□ 1.51
CCDC78-205ENST00000460023 MEIS1O00470 390 aa24.48■■□□□ 1.51
CCDC78-205ENST00000460023 CPLX1O14810 134 aa24.48■■□□□ 1.51
CCDC78-205ENST00000460023 CXCL10P02778 98 aa24.48■■□□□ 1.51
CCDC78-205ENST00000460023 CYP3A4P08684 503 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms