RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 MFAP1P55081 439 aaKnown RBP16.73■□□□□ 0.27
UPF3AP2-201ENST00000457924 QRICH1Q2TAL8 776 aa16.73■□□□□ 0.27
UPF3AP2-201ENST00000457924 ASPRV1Q53RT3 343 aa16.73■□□□□ 0.27
UPF3AP2-201ENST00000457924 FBXO11Q86XK2 927 aa16.73■□□□□ 0.27
UPF3AP2-201ENST00000457924 GJD3Q8N144 294 aa16.73■□□□□ 0.27
UPF3AP2-201ENST00000457924 TRIM6-TRIM34B2RNG4 842 aa16.72■□□□□ 0.27
UPF3AP2-201ENST00000457924 CFBP00751 764 aa16.72■□□□□ 0.27
UPF3AP2-201ENST00000457924 HOXB1P14653 301 aaPredicted RBP16.72■□□□□ 0.27
UPF3AP2-201ENST00000457924 TRIM71Q2Q1W2 868 aaKnown RBP16.72■□□□□ 0.27
UPF3AP2-201ENST00000457924 TRAF7Q6Q0C0 670 aa16.72■□□□□ 0.27
UPF3AP2-201ENST00000457924 FAM178BQ8IXR5 827 aa16.72■□□□□ 0.27
UPF3AP2-201ENST00000457924 VAT1LQ9HCJ6 419 aa16.72■□□□□ 0.27
UPF3AP2-201ENST00000457924 PXMP2Q9NR77 195 aa16.72■□□□□ 0.27
UPF3AP2-201ENST00000457924 CTNNA3Q9UI47 895 aa16.72■□□□□ 0.27
UPF3AP2-201ENST00000457924 MICAL3Q7RTP6 2002 aa16.72■□□□□ 0.27
UPF3AP2-201ENST00000457924 KDM4AO75164 1064 aa16.71■□□□□ 0.27
UPF3AP2-201ENST00000457924 PPFIA4O75335 1185 aa16.71■□□□□ 0.27
UPF3AP2-201ENST00000457924 PARP1P09874 1014 aaKnown RBP16.71■□□□□ 0.27
UPF3AP2-201ENST00000457924 SSTR3P32745 418 aaPredicted RBP16.71■□□□□ 0.27
UPF3AP2-201ENST00000457924 ZNF200P98182 395 aaPredicted RBP16.71■□□□□ 0.27
UPF3AP2-201ENST00000457924 MBTPS1Q14703 1052 aa16.71■□□□□ 0.27
UPF3AP2-201ENST00000457924 PTPROQ16827 1216 aa16.71■□□□□ 0.27
UPF3AP2-201ENST00000457924 KCNV1Q6PIU1 500 aa16.71■□□□□ 0.27
UPF3AP2-201ENST00000457924 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.71■□□□□ 0.27
UPF3AP2-201ENST00000457924 MYOCDQ8IZQ8 938 aa16.71■□□□□ 0.27
UPF3AP2-201ENST00000457924 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.71■□□□□ 0.27
UPF3AP2-201ENST00000457924 ANKS1AQ92625 1134 aa16.71■□□□□ 0.27
UPF3AP2-201ENST00000457924 WNT8BQ93098 351 aa16.71■□□□□ 0.27
UPF3AP2-201ENST00000457924 RILPL2Q969X0 211 aa16.71■□□□□ 0.27
UPF3AP2-201ENST00000457924 C17orf80Q9BSJ5 609 aa16.71■□□□□ 0.27
UPF3AP2-201ENST00000457924 PRR33A8MZF0 331 aa16.7■□□□□ 0.26
UPF3AP2-201ENST00000457924 RSPH10B2B2RC85 870 aa16.7■□□□□ 0.26
UPF3AP2-201ENST00000457924 RSPH10BP0C881 870 aa16.7■□□□□ 0.26
UPF3AP2-201ENST00000457924 HOXD8P13378 290 aaPredicted RBP16.7■□□□□ 0.26
UPF3AP2-201ENST00000457924 THPOP40225 353 aa16.7■□□□□ 0.26
UPF3AP2-201ENST00000457924 PUS10Q3MIT2 529 aaKnown RBP16.7■□□□□ 0.26
UPF3AP2-201ENST00000457924 PTCRAQ6ISU1 281 aaPredicted RBP16.7■□□□□ 0.26
UPF3AP2-201ENST00000457924 DBF4BQ8NFT6 615 aa16.7■□□□□ 0.26
UPF3AP2-201ENST00000457924 MRPL38Q96DV4 380 aaKnown RBP16.7■□□□□ 0.26
UPF3AP2-201ENST00000457924 SPATA33Q96N06 139 aa16.7■□□□□ 0.26
UPF3AP2-201ENST00000457924 ZSCAN10Q96SZ4 725 aaPredicted RBP16.7■□□□□ 0.26
UPF3AP2-201ENST00000457924 AMNQ9BXJ7 453 aa16.7■□□□□ 0.26
UPF3AP2-201ENST00000457924 JMJD4Q9H9V9 463 aa16.7■□□□□ 0.26
UPF3AP2-201ENST00000457924 LAMA4Q16363 1823 aa16.7■□□□□ 0.26
UPF3AP2-201ENST00000457924 DPYSL4O14531 572 aa16.69■□□□□ 0.26
UPF3AP2-201ENST00000457924 MYCLP12524 364 aaPredicted RBP16.69■□□□□ 0.26
UPF3AP2-201ENST00000457924 ALADP13716 330 aa16.69■□□□□ 0.26
UPF3AP2-201ENST00000457924 IL9P15248 144 aa16.69■□□□□ 0.26
UPF3AP2-201ENST00000457924 HSD17B4P51659 736 aa16.69■□□□□ 0.26
UPF3AP2-201ENST00000457924 HTRA4P83105 476 aaPredicted RBP16.69■□□□□ 0.26
UPF3AP2-201ENST00000457924 HSDL1Q3SXM5 330 aa16.69■□□□□ 0.26
UPF3AP2-201ENST00000457924 MYSM1Q5VVJ2 828 aa16.69■□□□□ 0.26
UPF3AP2-201ENST00000457924 SERINC5Q86VE9 423 aa16.69■□□□□ 0.26
UPF3AP2-201ENST00000457924 SAMD11Q96NU1 681 aa16.69■□□□□ 0.26
UPF3AP2-201ENST00000457924 MAP3K20Q9NYL2 800 aaKnown RBP16.69■□□□□ 0.26
UPF3AP2-201ENST00000457924 SORBS3O60504 671 aa16.68■□□□□ 0.26
UPF3AP2-201ENST00000457924 GGPS1O95749 300 aa16.68■□□□□ 0.26
UPF3AP2-201ENST00000457924 SDSP20132 328 aa16.68■□□□□ 0.26
UPF3AP2-201ENST00000457924 HIC1Q14526 733 aa16.68■□□□□ 0.26
UPF3AP2-201ENST00000457924 EPC2Q52LR7 807 aa16.68■□□□□ 0.26
UPF3AP2-201ENST00000457924 TIGD5Q53EQ6 642 aa16.68■□□□□ 0.26
UPF3AP2-201ENST00000457924 PLEKHG4Q58EX7 1191 aa16.68■□□□□ 0.26
UPF3AP2-201ENST00000457924 CELF3Q5SZQ8 465 aaKnown RBP16.68■□□□□ 0.26
UPF3AP2-201ENST00000457924 ENAHQ8N8S7 591 aaPredicted RBP16.68■□□□□ 0.26
UPF3AP2-201ENST00000457924 YME1L1Q96TA2 773 aa16.68■□□□□ 0.26
UPF3AP2-201ENST00000457924 PDCD2LQ9BRP1 358 aa16.68■□□□□ 0.26
UPF3AP2-201ENST00000457924 C17orf102A2RUQ5 167 aa16.67■□□□□ 0.26
UPF3AP2-201ENST00000457924 GRXCR2A6NFK2 248 aa16.67■□□□□ 0.26
UPF3AP2-201ENST00000457924 B4E1Z4 1266 aa16.67■□□□□ 0.26
UPF3AP2-201ENST00000457924 RGS20O76081 388 aa16.67■□□□□ 0.26
UPF3AP2-201ENST00000457924 TGFB3P10600 412 aa16.67■□□□□ 0.26
UPF3AP2-201ENST00000457924 GHRHRQ02643 423 aa16.67■□□□□ 0.26
UPF3AP2-201ENST00000457924 PGM5Q15124 567 aa16.67■□□□□ 0.26
UPF3AP2-201ENST00000457924 CSPP1Q1MSJ5 1256 aa16.67■□□□□ 0.26
UPF3AP2-201ENST00000457924 SAMD3Q8N6K7 520 aa16.67■□□□□ 0.26
UPF3AP2-201ENST00000457924 SEPT8Q92599 483 aa16.67■□□□□ 0.26
UPF3AP2-201ENST00000457924 ATP6V0A1Q93050 837 aa16.67■□□□□ 0.26
UPF3AP2-201ENST00000457924 C16orf70Q9BSU1 422 aa16.67■□□□□ 0.26
UPF3AP2-201ENST00000457924 MLXIPQ9HAP2 919 aa16.67■□□□□ 0.26
UPF3AP2-201ENST00000457924 ZSWIM5Q9P217 1185 aa16.67■□□□□ 0.26
UPF3AP2-201ENST00000457924 H3BNC9 293 aa16.66■□□□□ 0.26
UPF3AP2-201ENST00000457924 RBAK-RBAKDNI3L0D1 243 aa16.66■□□□□ 0.26
UPF3AP2-201ENST00000457924 OPLAHO14841 1288 aa16.66■□□□□ 0.26
UPF3AP2-201ENST00000457924 UBA1P22314 1058 aaKnown RBP16.66■□□□□ 0.26
UPF3AP2-201ENST00000457924 GPM6BQ13491 265 aa16.66■□□□□ 0.26
UPF3AP2-201ENST00000457924 HDAC1Q13547 482 aaPredicted RBP16.66■□□□□ 0.26
UPF3AP2-201ENST00000457924 STOX1Q6ZVD7 989 aa16.66■□□□□ 0.26
UPF3AP2-201ENST00000457924 VSIG10LQ86VR7 867 aa16.66■□□□□ 0.26
UPF3AP2-201ENST00000457924 NLRC5Q86WI3 1866 aa16.66■□□□□ 0.26
UPF3AP2-201ENST00000457924 BANK1Q8NDB2 785 aa16.66■□□□□ 0.26
UPF3AP2-201ENST00000457924 NEK9Q8TD19 979 aa16.66■□□□□ 0.26
UPF3AP2-201ENST00000457924 UIMC1Q96RL1 719 aa16.66■□□□□ 0.26
UPF3AP2-201ENST00000457924 UBAC1Q9BSL1 405 aa16.66■□□□□ 0.26
UPF3AP2-201ENST00000457924 KRT23Q9C075 422 aa16.66■□□□□ 0.26
UPF3AP2-201ENST00000457924 FAM50BQ9Y247 325 aa16.66■□□□□ 0.26
UPF3AP2-201ENST00000457924 PCDHA1Q9Y5I3 950 aa16.66■□□□□ 0.26
UPF3AP2-201ENST00000457924 MUC6Q6W4X9 2439 aa16.66■□□□□ 0.26
UPF3AP2-201ENST00000457924 H3BQ06 376 aaPredicted RBP16.65■□□□□ 0.26
UPF3AP2-201ENST00000457924 H3BRB1 525 aa16.65■□□□□ 0.26
UPF3AP2-201ENST00000457924 ZBTB5O15062 677 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms