RNA–Protein interactions for RNA: ENST00000457463.1

CNOT3-205, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-205ENST00000457463 KRT2P35908 639 aa13.9□□□□□ -0.18
CNOT3-205ENST00000457463 CDK7P50613 346 aa13.9□□□□□ -0.18
CNOT3-205ENST00000457463 CHMP4BP1P59074 171 aa13.9□□□□□ -0.18
CNOT3-205ENST00000457463 HMGN5P82970 282 aaKnown RBP13.9□□□□□ -0.18
CNOT3-205ENST00000457463 ITGA7Q13683 1181 aa13.9□□□□□ -0.18
CNOT3-205ENST00000457463 NEDD9Q14511 834 aa13.9□□□□□ -0.18
CNOT3-205ENST00000457463 PRR16Q569H4 304 aa13.9□□□□□ -0.18
CNOT3-205ENST00000457463 METTL7BQ6UX53 244 aa13.9□□□□□ -0.18
CNOT3-205ENST00000457463 SH3RF1Q7Z6J0 888 aa13.9□□□□□ -0.18
CNOT3-205ENST00000457463 DIS3L2Q8IYB7 885 aaKnown RBP13.9□□□□□ -0.18
CNOT3-205ENST00000457463 FAM177A1Q8N128 213 aaPredicted RBP13.9□□□□□ -0.18
CNOT3-205ENST00000457463 FAM184AQ8NB25 1140 aa13.9□□□□□ -0.18
CNOT3-205ENST00000457463 PPTC7Q8NI37 304 aa13.9□□□□□ -0.18
CNOT3-205ENST00000457463 C8orf76Q96K31 380 aa13.9□□□□□ -0.18
CNOT3-205ENST00000457463 GPR20Q99678 358 aa13.9□□□□□ -0.18
CNOT3-205ENST00000457463 MTG1Q9BT17 334 aaPredicted RBP13.9□□□□□ -0.18
CNOT3-205ENST00000457463 POLR3EQ9NVU0 708 aa13.9□□□□□ -0.18
CNOT3-205ENST00000457463 DOCK5Q9H7D0 1870 aa13.9□□□□□ -0.18
CNOT3-205ENST00000457463 A0A0U1RQG5 324 aaPredicted RBP13.89□□□□□ -0.19
CNOT3-205ENST00000457463 CCDC194A0A1B0GVG4 234 aa13.89□□□□□ -0.19
CNOT3-205ENST00000457463 GSTTP1A0A1W2PQM5 241 aa13.89□□□□□ -0.19
CNOT3-205ENST00000457463 KIF28PB7ZC32 967 aa13.89□□□□□ -0.19
CNOT3-205ENST00000457463 ARVCFO00192 962 aa13.89□□□□□ -0.19
CNOT3-205ENST00000457463 DHX15O43143 795 aaKnown RBP13.89□□□□□ -0.19
CNOT3-205ENST00000457463 HOXD8P13378 290 aaPredicted RBP13.89□□□□□ -0.19
CNOT3-205ENST00000457463 GJB2P29033 226 aa13.89□□□□□ -0.19
CNOT3-205ENST00000457463 CUL4AQ13619 759 aa13.89□□□□□ -0.19
CNOT3-205ENST00000457463 NONOQ15233 471 aaKnown RBP eCLIP13.89□□□□□ -0.19
CNOT3-205ENST00000457463 C1orf53Q5VUE5 145 aa13.89□□□□□ -0.19
CNOT3-205ENST00000457463 MCTP2Q6DN12 878 aa13.89□□□□□ -0.19
CNOT3-205ENST00000457463 KRT25Q7Z3Z0 450 aa13.89□□□□□ -0.19
CNOT3-205ENST00000457463 TRIM50Q86XT4 487 aa13.89□□□□□ -0.19
CNOT3-205ENST00000457463 SLC43A3Q8NBI5 491 aa13.89□□□□□ -0.19
CNOT3-205ENST00000457463 MYH7BA7E2Y1 1941 aa13.89□□□□□ -0.19
CNOT3-205ENST00000457463 MSH4O15457 936 aa13.88□□□□□ -0.19
CNOT3-205ENST00000457463 MAFGO15525 162 aa13.88□□□□□ -0.19
CNOT3-205ENST00000457463 SLC37A4O43826 429 aa13.88□□□□□ -0.19
CNOT3-205ENST00000457463 CABYRO75952 493 aa13.88□□□□□ -0.19
CNOT3-205ENST00000457463 CCNE2O96020 404 aa13.88□□□□□ -0.19
CNOT3-205ENST00000457463 USP11P51784 963 aa13.88□□□□□ -0.19
CNOT3-205ENST00000457463 FAAP100Q0VG06 881 aa13.88□□□□□ -0.19
CNOT3-205ENST00000457463 TRIM29Q14134 588 aa13.88□□□□□ -0.19
CNOT3-205ENST00000457463 DGKDQ16760 1214 aa13.88□□□□□ -0.19
CNOT3-205ENST00000457463 LETM2Q2VYF4 491 aa13.88□□□□□ -0.19
CNOT3-205ENST00000457463 NBPF20Q3BBV1 942 aa13.88□□□□□ -0.19
CNOT3-205ENST00000457463 BRDTQ58F21 947 aaPredicted RBP13.88□□□□□ -0.19
CNOT3-205ENST00000457463 UTP14CQ5TAP6 766 aaKnown RBP13.88□□□□□ -0.19
CNOT3-205ENST00000457463 NIPA1Q7RTP0 329 aa13.88□□□□□ -0.19
CNOT3-205ENST00000457463 IL27Q8NEV9 243 aa13.88□□□□□ -0.19
CNOT3-205ENST00000457463 FBXO18Q8NFZ0 1043 aa13.88□□□□□ -0.19
CNOT3-205ENST00000457463 CDHR1Q96JP9 859 aa13.88□□□□□ -0.19
CNOT3-205ENST00000457463 C16orf70Q9BSU1 422 aa13.88□□□□□ -0.19
CNOT3-205ENST00000457463 FOXD4L1Q9NU39 408 aa13.88□□□□□ -0.19
CNOT3-205ENST00000457463 CYP3A7-CYP3A51PA0A087WV96 503 aa13.87□□□□□ -0.19
CNOT3-205ENST00000457463 TRIM43BA6NCK2 446 aa13.87□□□□□ -0.19
CNOT3-205ENST00000457463 NOP56O00567 594 aaKnown RBP13.87□□□□□ -0.19
CNOT3-205ENST00000457463 PPFIA4O75335 1185 aa13.87□□□□□ -0.19
CNOT3-205ENST00000457463 F2P00734 622 aa13.87□□□□□ -0.19
CNOT3-205ENST00000457463 LGALS2P05162 132 aa13.87□□□□□ -0.19
CNOT3-205ENST00000457463 CYP3A7P24462 503 aa13.87□□□□□ -0.19
CNOT3-205ENST00000457463 ITGB8P26012 769 aa13.87□□□□□ -0.19
CNOT3-205ENST00000457463 PSEN2P49810 448 aa13.87□□□□□ -0.19
CNOT3-205ENST00000457463 HIC1Q14526 733 aa13.87□□□□□ -0.19
CNOT3-205ENST00000457463 FAM126BQ8IXS8 530 aa13.87□□□□□ -0.19
CNOT3-205ENST00000457463 TRIM43Q96BQ3 446 aaPredicted RBP13.87□□□□□ -0.19
CNOT3-205ENST00000457463 MBOAT7Q96N66 472 aa13.87□□□□□ -0.19
CNOT3-205ENST00000457463 PCYT2Q99447 389 aa13.87□□□□□ -0.19
CNOT3-205ENST00000457463 ZNF577Q9BSK1 485 aa13.87□□□□□ -0.19
CNOT3-205ENST00000457463 TRPV6Q9H1D0 765 aa13.87□□□□□ -0.19
CNOT3-205ENST00000457463 JPH1Q9HDC5 661 aaPredicted RBP13.87□□□□□ -0.19
CNOT3-205ENST00000457463 PDLIM7Q9NR12 457 aa13.87□□□□□ -0.19
CNOT3-205ENST00000457463 TRMT13Q9NUP7 481 aaKnown RBP13.87□□□□□ -0.19
CNOT3-205ENST00000457463 PDE4DIPQ5VU43 2346 aa13.86□□□□□ -0.19
CNOT3-205ENST00000457463 K7ELQ4 463 aaPredicted RBP13.86□□□□□ -0.19
CNOT3-205ENST00000457463 HAS3O00219 553 aa13.86□□□□□ -0.19
CNOT3-205ENST00000457463 IPO5O00410 1097 aaKnown RBP13.86□□□□□ -0.19
CNOT3-205ENST00000457463 B4GALT4O60513 344 aa13.86□□□□□ -0.19
CNOT3-205ENST00000457463 KPNA6O60684 536 aa13.86□□□□□ -0.19
CNOT3-205ENST00000457463 TCF7P36402 384 aaPredicted RBP13.86□□□□□ -0.19
CNOT3-205ENST00000457463 SETQ01105 290 aaPredicted RBP13.86□□□□□ -0.19
CNOT3-205ENST00000457463 MFSD10Q14728 455 aa13.86□□□□□ -0.19
CNOT3-205ENST00000457463 KIAA0753Q2KHM9 967 aa13.86□□□□□ -0.19
CNOT3-205ENST00000457463 Q4G0T1 1027 aa13.86□□□□□ -0.19
CNOT3-205ENST00000457463 FAM47CQ5HY64 1035 aa13.86□□□□□ -0.19
CNOT3-205ENST00000457463 ANKRD33Q7Z3H0 272 aa13.86□□□□□ -0.19
CNOT3-205ENST00000457463 NEK8Q86SG6 692 aa13.86□□□□□ -0.19
CNOT3-205ENST00000457463 GIMAP8Q8ND71 665 aaPredicted RBP13.86□□□□□ -0.19
CNOT3-205ENST00000457463 SDF4Q9BRK5 362 aa13.86□□□□□ -0.19
CNOT3-205ENST00000457463 BRMS1Q9HCU9 246 aa13.86□□□□□ -0.19
CNOT3-205ENST00000457463 PRDM5Q9NQX1 630 aaPredicted RBP13.86□□□□□ -0.19
CNOT3-205ENST00000457463 SLC9A2Q9UBY0 812 aa13.86□□□□□ -0.19
CNOT3-205ENST00000457463 SMC3Q9UQE7 1217 aa13.86□□□□□ -0.19
CNOT3-205ENST00000457463 NFASCO94856 1347 aa13.86□□□□□ -0.19
CNOT3-205ENST00000457463 CCNT1O60563 726 aaKnown RBP13.85□□□□□ -0.19
CNOT3-205ENST00000457463 CD4P01730 458 aa13.85□□□□□ -0.19
CNOT3-205ENST00000457463 ATP2B1P20020 1258 aa13.85□□□□□ -0.19
CNOT3-205ENST00000457463 ACTR2P61160 394 aa13.85□□□□□ -0.19
CNOT3-205ENST00000457463 ZNF200P98182 395 aaPredicted RBP13.85□□□□□ -0.19
CNOT3-205ENST00000457463 SEPT1Q8WYJ6 367 aa13.85□□□□□ -0.19
CNOT3-205ENST00000457463 SLC5A5Q92911 643 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms