RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 CTAGE5O15320 804 aa20.23■□□□□ 0.83
FAM239A-203ENST00000456563 DHX15O43143 795 aaKnown RBP20.23■□□□□ 0.83
FAM239A-203ENST00000456563 FARP2O94887 1054 aaPredicted RBP20.23■□□□□ 0.83
FAM239A-203ENST00000456563 F13A1P00488 732 aa20.23■□□□□ 0.83
FAM239A-203ENST00000456563 CST5P28325 142 aaPredicted RBP20.23■□□□□ 0.83
FAM239A-203ENST00000456563 MCM7P33993 719 aa20.23■□□□□ 0.83
FAM239A-203ENST00000456563 ZNF174Q15697 407 aa20.23■□□□□ 0.83
FAM239A-203ENST00000456563 CYFIP1Q7L576 1253 aa20.23■□□□□ 0.83
FAM239A-203ENST00000456563 POTEDQ86YR6 584 aa20.23■□□□□ 0.83
FAM239A-203ENST00000456563 ARRDC4Q8NCT1 418 aa20.23■□□□□ 0.83
FAM239A-203ENST00000456563 KLHDC9Q8NEP7 349 aa20.23■□□□□ 0.83
FAM239A-203ENST00000456563 RIT2Q99578 217 aa20.23■□□□□ 0.83
FAM239A-203ENST00000456563 SDF4Q9BRK5 362 aa20.23■□□□□ 0.83
FAM239A-203ENST00000456563 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.23■□□□□ 0.83
FAM239A-203ENST00000456563 PKD2L1Q9P0L9 805 aa20.23■□□□□ 0.83
FAM239A-203ENST00000456563 ZDHHC9Q9Y397 364 aa20.23■□□□□ 0.83
FAM239A-203ENST00000456563 A6NJR5 290 aa20.22■□□□□ 0.83
FAM239A-203ENST00000456563 TFRCP02786 760 aaKnown RBP20.22■□□□□ 0.83
FAM239A-203ENST00000456563 C6orf222P0C671 652 aaPredicted RBP20.22■□□□□ 0.83
FAM239A-203ENST00000456563 NBR1Q14596 966 aa20.22■□□□□ 0.83
FAM239A-203ENST00000456563 LRRC41Q15345 812 aa20.22■□□□□ 0.83
FAM239A-203ENST00000456563 RNF180Q86T96 592 aa20.22■□□□□ 0.83
FAM239A-203ENST00000456563 PPTC7Q8NI37 304 aa20.22■□□□□ 0.83
FAM239A-203ENST00000456563 IPO9Q96P70 1041 aaKnown RBP20.22■□□□□ 0.83
FAM239A-203ENST00000456563 MTMR9Q96QG7 549 aa20.22■□□□□ 0.83
FAM239A-203ENST00000456563 CENPFP49454 3210 aa20.21■□□□□ 0.83
FAM239A-203ENST00000456563 MYADML2A6NDP7 307 aa20.21■□□□□ 0.83
FAM239A-203ENST00000456563 PSMD10O75832 226 aa20.21■□□□□ 0.83
FAM239A-203ENST00000456563 BAG4O95429 457 aaKnown RBP20.21■□□□□ 0.83
FAM239A-203ENST00000456563 CPT1AP50416 773 aa20.21■□□□□ 0.83
FAM239A-203ENST00000456563 IRX5P78411 483 aaPredicted RBP20.21■□□□□ 0.83
FAM239A-203ENST00000456563 NUCB2P80303 420 aa20.21■□□□□ 0.83
FAM239A-203ENST00000456563 CALCRLQ16602 461 aa20.21■□□□□ 0.83
FAM239A-203ENST00000456563 FSCN1Q16658 493 aaKnown RBP20.21■□□□□ 0.83
FAM239A-203ENST00000456563 HSDL1Q3SXM5 330 aa20.21■□□□□ 0.83
FAM239A-203ENST00000456563 FOXD4L5Q5VV16 416 aaPredicted RBP20.21■□□□□ 0.83
FAM239A-203ENST00000456563 CCSAPQ6IQ19 270 aaPredicted RBP20.21■□□□□ 0.83
FAM239A-203ENST00000456563 SLFN12Q8IYM2 578 aa20.21■□□□□ 0.83
FAM239A-203ENST00000456563 AFG1LQ8WV93 481 aa20.21■□□□□ 0.83
FAM239A-203ENST00000456563 FOXD4L4Q8WXT5 416 aaPredicted RBP20.21■□□□□ 0.83
FAM239A-203ENST00000456563 HAS1Q92839 578 aa20.21■□□□□ 0.83
FAM239A-203ENST00000456563 SPATA33Q96N06 139 aa20.21■□□□□ 0.83
FAM239A-203ENST00000456563 TMEM60Q9H2L4 133 aa20.21■□□□□ 0.83
FAM239A-203ENST00000456563 JPH1Q9HDC5 661 aaPredicted RBP20.21■□□□□ 0.83
FAM239A-203ENST00000456563 SLC9A2Q9UBY0 812 aa20.21■□□□□ 0.83
FAM239A-203ENST00000456563 SORBS3O60504 671 aa20.2■□□□□ 0.82
FAM239A-203ENST00000456563 BRDTQ58F21 947 aaPredicted RBP20.2■□□□□ 0.82
FAM239A-203ENST00000456563 GNASQ5JWF2 1037 aa20.2■□□□□ 0.82
FAM239A-203ENST00000456563 LRCH2Q5VUJ6 765 aa20.2■□□□□ 0.82
FAM239A-203ENST00000456563 FAM173BQ6P4H8 233 aa20.2■□□□□ 0.82
FAM239A-203ENST00000456563 C4orf32Q8N8J7 132 aa20.2■□□□□ 0.82
FAM239A-203ENST00000456563 ANKLE1Q8NAG6 615 aa20.2■□□□□ 0.82
FAM239A-203ENST00000456563 UIMC1Q96RL1 719 aa20.2■□□□□ 0.82
FAM239A-203ENST00000456563 TSEN34Q9BSV6 310 aaKnown RBP20.2■□□□□ 0.82
FAM239A-203ENST00000456563 TEKT3Q9BXF9 490 aa20.2■□□□□ 0.82
FAM239A-203ENST00000456563 CIZ1Q9ULV3 898 aaPredicted RBP20.2■□□□□ 0.82
FAM239A-203ENST00000456563 FRMPD3Q5JV73 1810 aa20.19■□□□□ 0.82
FAM239A-203ENST00000456563 DNM1LO00429 736 aa20.19■□□□□ 0.82
FAM239A-203ENST00000456563 LAD1O00515 517 aa20.19■□□□□ 0.82
FAM239A-203ENST00000456563 MARCH6O60337 910 aa20.19■□□□□ 0.82
FAM239A-203ENST00000456563 GAS7O60861 476 aa20.19■□□□□ 0.82
FAM239A-203ENST00000456563 MMP3P08254 477 aa20.19■□□□□ 0.82
FAM239A-203ENST00000456563 HOXD8P13378 290 aaPredicted RBP20.19■□□□□ 0.82
FAM239A-203ENST00000456563 BEX3Q00994 111 aa20.19■□□□□ 0.82
FAM239A-203ENST00000456563 KRT76Q01546 638 aa20.19■□□□□ 0.82
FAM239A-203ENST00000456563 B3GNT9Q6UX72 402 aa20.19■□□□□ 0.82
FAM239A-203ENST00000456563 PCSK9Q8NBP7 692 aaKnown RBP20.19■□□□□ 0.82
FAM239A-203ENST00000456563 GJA10Q969M2 543 aa20.19■□□□□ 0.82
FAM239A-203ENST00000456563 GPR20Q99678 358 aa20.19■□□□□ 0.82
FAM239A-203ENST00000456563 NOP56O00567 594 aaKnown RBP20.18■□□□□ 0.82
FAM239A-203ENST00000456563 ZEB2O60315 1214 aa20.18■□□□□ 0.82
FAM239A-203ENST00000456563 KPNA6O60684 536 aa20.18■□□□□ 0.82
FAM239A-203ENST00000456563 PPFIA4O75335 1185 aa20.18■□□□□ 0.82
FAM239A-203ENST00000456563 BMP15O95972 392 aa20.18■□□□□ 0.82
FAM239A-203ENST00000456563 OR52Z1P0C646 297 aa20.18■□□□□ 0.82
FAM239A-203ENST00000456563 PTGDRQ13258 359 aa20.18■□□□□ 0.82
FAM239A-203ENST00000456563 KCNA10Q16322 511 aa20.18■□□□□ 0.82
FAM239A-203ENST00000456563 ZNF746Q6NUN9 644 aaPredicted RBP20.18■□□□□ 0.82
FAM239A-203ENST00000456563 SEPT1Q8WYJ6 367 aa20.18■□□□□ 0.82
FAM239A-203ENST00000456563 TCEAL9Q9UHQ7 104 aa20.18■□□□□ 0.82
FAM239A-203ENST00000456563 TELO2Q9Y4R8 837 aa20.18■□□□□ 0.82
FAM239A-203ENST00000456563 GSTTP1A0A1W2PQM5 241 aa20.17■□□□□ 0.82
FAM239A-203ENST00000456563 MOXD2PA6NHM9 499 aa20.17■□□□□ 0.82
FAM239A-203ENST00000456563 KBTBD13C9JR72 458 aa20.17■□□□□ 0.82
FAM239A-203ENST00000456563 DDX39AO00148 427 aaKnown RBP20.17■□□□□ 0.82
FAM239A-203ENST00000456563 ATG7O95352 703 aa20.17■□□□□ 0.82
FAM239A-203ENST00000456563 CCNE2O96020 404 aa20.17■□□□□ 0.82
FAM239A-203ENST00000456563 MYCNP04198 464 aaPredicted RBP20.17■□□□□ 0.82
FAM239A-203ENST00000456563 MNX1P50219 401 aaPredicted RBP20.17■□□□□ 0.82
FAM239A-203ENST00000456563 ACTR2P61160 394 aa20.17■□□□□ 0.82
FAM239A-203ENST00000456563 ATP2C1P98194 919 aaPredicted RBP20.17■□□□□ 0.82
FAM239A-203ENST00000456563 SP4Q02446 784 aa20.17■□□□□ 0.82
FAM239A-203ENST00000456563 SF3A1Q15459 793 aaKnown RBP20.17■□□□□ 0.82
FAM239A-203ENST00000456563 DGKDQ16760 1214 aa20.17■□□□□ 0.82
FAM239A-203ENST00000456563 SMAP1Q8IYB5 467 aaPredicted RBP20.17■□□□□ 0.82
FAM239A-203ENST00000456563 ZNF396Q96N95 335 aaPredicted RBP20.17■□□□□ 0.82
FAM239A-203ENST00000456563 POLR3EQ9NVU0 708 aa20.17■□□□□ 0.82
FAM239A-203ENST00000456563 VAV3Q9UKW4 847 aa20.17■□□□□ 0.82
FAM239A-203ENST00000456563 PCDHA12Q9UN75 941 aa20.17■□□□□ 0.82
FAM239A-203ENST00000456563 CEP131Q9UPN4 1083 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms