RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 COL4A6Q14031 1691 aa21.68■■□□□ 1.06
MSH6-206ENST00000455383 FRMPD4Q14CM0 1322 aa21.67■■□□□ 1.06
MSH6-206ENST00000455383 GCOM1H8Y6P7 765 aaPredicted RBP21.67■■□□□ 1.06
MSH6-206ENST00000455383 LGALS2P05162 132 aa21.67■■□□□ 1.06
MSH6-206ENST00000455383 POLR2MP0CAP2 368 aa21.67■■□□□ 1.06
MSH6-206ENST00000455383 ICAM3P32942 547 aa21.67■■□□□ 1.06
MSH6-206ENST00000455383 TRAF1Q13077 416 aa21.67■■□□□ 1.06
MSH6-206ENST00000455383 GRM4Q14833 912 aa21.67■■□□□ 1.06
MSH6-206ENST00000455383 MYOCDQ8IZQ8 938 aa21.67■■□□□ 1.06
MSH6-206ENST00000455383 ATP6V0A1Q93050 837 aa21.67■■□□□ 1.06
MSH6-206ENST00000455383 MRPL38Q96DV4 380 aaKnown RBP21.67■■□□□ 1.06
MSH6-206ENST00000455383 SAMD11Q96NU1 681 aa21.67■■□□□ 1.06
MSH6-206ENST00000455383 BCAS3Q9H6U6 928 aa21.67■■□□□ 1.06
MSH6-206ENST00000455383 TREHO43280 583 aa21.66■■□□□ 1.06
MSH6-206ENST00000455383 CYTH3O43739 400 aa21.66■■□□□ 1.06
MSH6-206ENST00000455383 SMIM10L2AP0DMW4 78 aa21.66■■□□□ 1.06
MSH6-206ENST00000455383 SMIM10L2BP0DMW5 78 aa21.66■■□□□ 1.06
MSH6-206ENST00000455383 TOP1MTQ969P6 601 aa21.66■■□□□ 1.06
MSH6-206ENST00000455383 ZFP91Q96JP5 570 aaPredicted RBP21.66■■□□□ 1.06
MSH6-206ENST00000455383 PIGSQ96S52 555 aa21.66■■□□□ 1.06
MSH6-206ENST00000455383 OSBPL7Q9BZF2 842 aa21.66■■□□□ 1.06
MSH6-206ENST00000455383 RNPEPQ9H4A4 650 aa21.66■■□□□ 1.06
MSH6-206ENST00000455383 KCNA5P22460 613 aa21.65■■□□□ 1.06
MSH6-206ENST00000455383 MRPS9P82933 396 aaKnown RBP21.65■■□□□ 1.06
MSH6-206ENST00000455383 EPC2Q52LR7 807 aa21.65■■□□□ 1.06
MSH6-206ENST00000455383 HOMER1Q86YM7 354 aa21.65■■□□□ 1.06
MSH6-206ENST00000455383 NEK9Q8TD19 979 aa21.65■■□□□ 1.06
MSH6-206ENST00000455383 SEPT8Q92599 483 aa21.65■■□□□ 1.06
MSH6-206ENST00000455383 INPP4AQ96PE3 977 aaPredicted RBP21.65■■□□□ 1.06
MSH6-206ENST00000455383 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.64■■□□□ 1.05
MSH6-206ENST00000455383 H3BNC9 293 aa21.64■■□□□ 1.05
MSH6-206ENST00000455383 STAM2O75886 525 aa21.64■■□□□ 1.05
MSH6-206ENST00000455383 IL9P15248 144 aa21.64■■□□□ 1.05
MSH6-206ENST00000455383 SEMA3FQ13275 785 aa21.64■■□□□ 1.05
MSH6-206ENST00000455383 COL19A1Q14993 1142 aa21.64■■□□□ 1.05
MSH6-206ENST00000455383 METTL7BQ6UX53 244 aa21.64■■□□□ 1.05
MSH6-206ENST00000455383 FCHSD1Q86WN1 690 aa21.64■■□□□ 1.05
MSH6-206ENST00000455383 GJD3Q8N144 294 aa21.64■■□□□ 1.05
MSH6-206ENST00000455383 USP26Q9BXU7 913 aa21.64■■□□□ 1.05
MSH6-206ENST00000455383 PNMA6FA0A0J9YX94 578 aa21.63■■□□□ 1.05
MSH6-206ENST00000455383 GRXCR2A6NFK2 248 aa21.63■■□□□ 1.05
MSH6-206ENST00000455383 SPATA31C2B4DYI2 1134 aa21.63■■□□□ 1.05
MSH6-206ENST00000455383 ADAM17P78536 824 aa21.63■■□□□ 1.05
MSH6-206ENST00000455383 TROAPQ12815 778 aa21.63■■□□□ 1.05
MSH6-206ENST00000455383 PTPROQ16827 1216 aa21.63■■□□□ 1.05
MSH6-206ENST00000455383 GNPTABQ3T906 1256 aa21.63■■□□□ 1.05
MSH6-206ENST00000455383 FAM26DQ5JW98 314 aa21.63■■□□□ 1.05
MSH6-206ENST00000455383 GPR20Q99678 358 aa21.63■■□□□ 1.05
MSH6-206ENST00000455383 SENP2Q9HC62 589 aa21.63■■□□□ 1.05
MSH6-206ENST00000455383 FAM86C2PA6NEL3 165 aa21.62■■□□□ 1.05
MSH6-206ENST00000455383 NEDD9Q14511 834 aa21.62■■□□□ 1.05
MSH6-206ENST00000455383 PUS10Q3MIT2 529 aaKnown RBP21.62■■□□□ 1.05
MSH6-206ENST00000455383 TIGD5Q53EQ6 642 aa21.62■■□□□ 1.05
MSH6-206ENST00000455383 PTCRAQ6ISU1 281 aaPredicted RBP21.62■■□□□ 1.05
MSH6-206ENST00000455383 YME1L1Q96TA2 773 aa21.62■■□□□ 1.05
MSH6-206ENST00000455383 NOP56O00567 594 aaKnown RBP21.61■■□□□ 1.05
MSH6-206ENST00000455383 GNAT1P11488 350 aa21.61■■□□□ 1.05
MSH6-206ENST00000455383 TMEM192Q8IY95 271 aa21.61■■□□□ 1.05
MSH6-206ENST00000455383 BANK1Q8NDB2 785 aa21.61■■□□□ 1.05
MSH6-206ENST00000455383 APBB2Q92870 758 aa21.61■■□□□ 1.05
MSH6-206ENST00000455383 SETD4Q9NVD3 440 aa21.61■■□□□ 1.05
MSH6-206ENST00000455383 BAZ2BQ9UIF8 2168 aaKnown RBP21.6■■□□□ 1.05
MSH6-206ENST00000455383 PRR33A8MZF0 331 aa21.6■■□□□ 1.05
MSH6-206ENST00000455383 FIBPO43427 364 aa21.6■■□□□ 1.05
MSH6-206ENST00000455383 CYP21A2P08686 494 aa21.6■■□□□ 1.05
MSH6-206ENST00000455383 CTSHP09668 335 aa21.6■■□□□ 1.05
MSH6-206ENST00000455383 TRDNQ13061 729 aa21.6■■□□□ 1.05
MSH6-206ENST00000455383 GPM6BQ13491 265 aa21.6■■□□□ 1.05
MSH6-206ENST00000455383 CYFIP1Q7L576 1253 aa21.6■■□□□ 1.05
MSH6-206ENST00000455383 PABPC5Q96DU9 382 aaKnown RBP21.6■■□□□ 1.05
MSH6-206ENST00000455383 TELO2Q9Y4R8 837 aa21.6■■□□□ 1.05
MSH6-206ENST00000455383 IFIT3O14879 490 aaKnown RBP21.59■■□□□ 1.05
MSH6-206ENST00000455383 RPAINQ86UA6 219 aa21.59■■□□□ 1.05
MSH6-206ENST00000455383 TRIM50Q86XT4 487 aa21.59■■□□□ 1.05
MSH6-206ENST00000455383 LMBR1Q8WVP7 490 aa21.59■■□□□ 1.05
MSH6-206ENST00000455383 SENP7Q9BQF6 1050 aa21.59■■□□□ 1.05
MSH6-206ENST00000455383 UPP2O95045 317 aa21.58■■□□□ 1.05
MSH6-206ENST00000455383 LINC00271P0C7V0 271 aa21.58■■□□□ 1.05
MSH6-206ENST00000455383 TCEAL5Q5H9L2 206 aa21.58■■□□□ 1.05
MSH6-206ENST00000455383 NSUN3Q9H649 340 aaKnown RBP21.58■■□□□ 1.05
MSH6-206ENST00000455383 RTEL1Q9NZ71 1219 aa21.58■■□□□ 1.05
MSH6-206ENST00000455383 ZNF215Q9UL58 517 aaPredicted RBP21.58■■□□□ 1.05
MSH6-206ENST00000455383 U3KPZ7 1027 aaPredicted RBP21.58■■□□□ 1.05
MSH6-206ENST00000455383 RALGAPA2Q2PPJ7 1873 aa21.58■■□□□ 1.04
MSH6-206ENST00000455383 C5orf67F2Z3F1 127 aa21.57■■□□□ 1.04
MSH6-206ENST00000455383 H3BQ06 376 aaPredicted RBP21.57■■□□□ 1.04
MSH6-206ENST00000455383 GSPT1P15170 499 aaKnown RBP21.57■■□□□ 1.04
MSH6-206ENST00000455383 WTAPQ15007 396 aa21.57■■□□□ 1.04
MSH6-206ENST00000455383 PCNX4Q63HM2 1172 aa21.57■■□□□ 1.04
MSH6-206ENST00000455383 XRRA1Q6P2D8 792 aa21.57■■□□□ 1.04
MSH6-206ENST00000455383 IFIH1Q9BYX4 1025 aaKnown RBP21.57■■□□□ 1.04
MSH6-206ENST00000455383 EHMT1Q9H9B1 1298 aa21.57■■□□□ 1.04
MSH6-206ENST00000455383 TAF6LQ9Y6J9 622 aa21.57■■□□□ 1.04
MSH6-206ENST00000455383 NRCAMQ92823 1304 aa21.56■■□□□ 1.04
MSH6-206ENST00000455383 NLRC5Q86WI3 1866 aa21.56■■□□□ 1.04
MSH6-206ENST00000455383 DOCK5Q9H7D0 1870 aa21.56■■□□□ 1.04
MSH6-206ENST00000455383 ERICH2A1L162 156 aa21.56■■□□□ 1.04
MSH6-206ENST00000455383 PIK3CDO00329 1044 aa21.56■■□□□ 1.04
MSH6-206ENST00000455383 CHRNA1P02708 482 aa21.56■■□□□ 1.04
MSH6-206ENST00000455383 ALADP13716 330 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms