RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 MCMDC2Q4G0Z9 681 aa11.54□□□□□ -0.56
CLCN4-204ENST00000454850 CELF3Q5SZQ8 465 aaKnown RBP11.54□□□□□ -0.56
CLCN4-204ENST00000454850 MYSM1Q5VVJ2 828 aa11.54□□□□□ -0.56
CLCN4-204ENST00000454850 ZNF589Q86UQ0 364 aaPredicted RBP11.54□□□□□ -0.56
CLCN4-204ENST00000454850 ESR2Q92731 530 aa11.54□□□□□ -0.56
CLCN4-204ENST00000454850 GPKOWQ92917 476 aaPredicted RBP eCLIP11.54□□□□□ -0.56
CLCN4-204ENST00000454850 EVI5LQ96CN4 794 aa11.54□□□□□ -0.56
CLCN4-204ENST00000454850 POP1Q99575 1024 aaKnown RBP11.54□□□□□ -0.56
CLCN4-204ENST00000454850 KAT14Q9H8E8 782 aa11.54□□□□□ -0.56
CLCN4-204ENST00000454850 CCDC171Q6TFL3 1326 aa11.54□□□□□ -0.56
CLCN4-204ENST00000454850 PLXNA4Q9HCM2 1894 aa11.53□□□□□ -0.56
CLCN4-204ENST00000454850 PTPRZ1P23471 2315 aaPredicted RBP11.53□□□□□ -0.56
CLCN4-204ENST00000454850 MYO15AQ9UKN7 3530 aa11.53□□□□□ -0.56
CLCN4-204ENST00000454850 GRM6O15303 877 aa11.53□□□□□ -0.56
CLCN4-204ENST00000454850 MBTPS2O43462 519 aa11.53□□□□□ -0.56
CLCN4-204ENST00000454850 PPFIA4O75335 1185 aa11.53□□□□□ -0.56
CLCN4-204ENST00000454850 HOXD8P13378 290 aaPredicted RBP11.53□□□□□ -0.56
CLCN4-204ENST00000454850 UBA1P22314 1058 aaKnown RBP11.53□□□□□ -0.56
CLCN4-204ENST00000454850 HOXA13P31271 388 aaPredicted RBP11.53□□□□□ -0.56
CLCN4-204ENST00000454850 GTF2F1P35269 517 aaKnown RBP eCLIP11.53□□□□□ -0.56
CLCN4-204ENST00000454850 SP2Q02086 613 aa11.53□□□□□ -0.56
CLCN4-204ENST00000454850 NMIQ13287 307 aaPredicted RBP11.53□□□□□ -0.56
CLCN4-204ENST00000454850 SMAD2Q15796 467 aaKnown RBP11.53□□□□□ -0.56
CLCN4-204ENST00000454850 RNF135Q8IUD6 432 aa11.53□□□□□ -0.56
CLCN4-204ENST00000454850 FIBCD1Q8N539 461 aa11.53□□□□□ -0.56
CLCN4-204ENST00000454850 PRSS33Q8NF86 280 aa11.53□□□□□ -0.56
CLCN4-204ENST00000454850 IL31RAQ8NI17 732 aa11.53□□□□□ -0.56
CLCN4-204ENST00000454850 IL17RAQ96F46 866 aa11.53□□□□□ -0.56
CLCN4-204ENST00000454850 PDCD2LQ9BRP1 358 aa11.53□□□□□ -0.56
CLCN4-204ENST00000454850 C16orf70Q9BSU1 422 aa11.53□□□□□ -0.56
CLCN4-204ENST00000454850 RNF41Q9H4P4 317 aaPredicted RBP11.53□□□□□ -0.56
CLCN4-204ENST00000454850 MLXIPQ9HAP2 919 aa11.53□□□□□ -0.56
CLCN4-204ENST00000454850 ZMYM6O95789 1325 aa11.53□□□□□ -0.56
CLCN4-204ENST00000454850 VPS13AQ96RL7 3174 aa11.52□□□□□ -0.57
CLCN4-204ENST00000454850 H3BRB1 525 aa11.52□□□□□ -0.57
CLCN4-204ENST00000454850 STXBP3O00186 592 aa11.52□□□□□ -0.57
CLCN4-204ENST00000454850 OPLAHO14841 1288 aa11.52□□□□□ -0.57
CLCN4-204ENST00000454850 LINC01565O15544 149 aa11.52□□□□□ -0.57
CLCN4-204ENST00000454850 NCK2O43639 380 aa11.52□□□□□ -0.57
CLCN4-204ENST00000454850 KDM4AO75164 1064 aa11.52□□□□□ -0.57
CLCN4-204ENST00000454850 TBX10O75333 385 aa11.52□□□□□ -0.57
CLCN4-204ENST00000454850 LGALS2P05162 132 aa11.52□□□□□ -0.57
CLCN4-204ENST00000454850 HSD17B4P51659 736 aa11.52□□□□□ -0.57
CLCN4-204ENST00000454850 ASPRV1Q53RT3 343 aa11.52□□□□□ -0.57
CLCN4-204ENST00000454850 HERC4Q5GLZ8 1057 aaPredicted RBP11.52□□□□□ -0.57
CLCN4-204ENST00000454850 KCNV1Q6PIU1 500 aa11.52□□□□□ -0.57
CLCN4-204ENST00000454850 DGKHQ86XP1 1220 aa11.52□□□□□ -0.57
CLCN4-204ENST00000454850 C11orf84Q9BUA3 381 aaPredicted RBP11.52□□□□□ -0.57
CLCN4-204ENST00000454850 MAF1Q9H063 256 aa11.52□□□□□ -0.57
CLCN4-204ENST00000454850 RNPEPQ9H4A4 650 aa11.52□□□□□ -0.57
CLCN4-204ENST00000454850 TUT1Q9H6E5 874 aaKnown RBP11.52□□□□□ -0.57
CLCN4-204ENST00000454850 JMJD4Q9H9V9 463 aa11.52□□□□□ -0.57
CLCN4-204ENST00000454850 SETD4Q9NVD3 440 aa11.52□□□□□ -0.57
CLCN4-204ENST00000454850 ZBTB47Q9UFB7 747 aaPredicted RBP11.52□□□□□ -0.57
CLCN4-204ENST00000454850 PCDHB15Q9Y5E8 787 aa11.52□□□□□ -0.57
CLCN4-204ENST00000454850 RIF1Q5UIP0 2472 aaKnown RBP11.52□□□□□ -0.57
CLCN4-204ENST00000454850 ADGRA3Q8IWK6 1321 aa11.52□□□□□ -0.57
CLCN4-204ENST00000454850 SALL3Q9BXA9 1300 aa11.52□□□□□ -0.57
CLCN4-204ENST00000454850 TRIM6-TRIM34B2RNG4 842 aa11.51□□□□□ -0.57
CLCN4-204ENST00000454850 NOP56O00567 594 aaKnown RBP11.51□□□□□ -0.57
CLCN4-204ENST00000454850 PARP1P09874 1014 aaKnown RBP11.51□□□□□ -0.57
CLCN4-204ENST00000454850 PCP11498 1178 aaKnown RBP11.51□□□□□ -0.57
CLCN4-204ENST00000454850 BMPR1AP36894 532 aa11.51□□□□□ -0.57
CLCN4-204ENST00000454850 NDUFV1P49821 464 aa11.51□□□□□ -0.57
CLCN4-204ENST00000454850 SMAD4Q13485 552 aaKnown RBP11.51□□□□□ -0.57
CLCN4-204ENST00000454850 PGM5Q15124 567 aa11.51□□□□□ -0.57
CLCN4-204ENST00000454850 CTC1Q2NKJ3 1217 aa11.51□□□□□ -0.57
CLCN4-204ENST00000454850 IER5LQ5T953 404 aa11.51□□□□□ -0.57
CLCN4-204ENST00000454850 IQCA1Q86XH1 822 aa11.51□□□□□ -0.57
CLCN4-204ENST00000454850 TRIM50Q86XT4 487 aa11.51□□□□□ -0.57
CLCN4-204ENST00000454850 APBB2Q92870 758 aa11.51□□□□□ -0.57
CLCN4-204ENST00000454850 AMNQ9BXJ7 453 aa11.51□□□□□ -0.57
CLCN4-204ENST00000454850 BCAS3Q9H6U6 928 aa11.51□□□□□ -0.57
CLCN4-204ENST00000454850 CD207Q9UJ71 328 aa11.51□□□□□ -0.57
CLCN4-204ENST00000454850 SUPT16HQ9Y5B9 1047 aaKnown RBP11.51□□□□□ -0.57
CLCN4-204ENST00000454850 DMDP11532 3685 aa11.5□□□□□ -0.57
CLCN4-204ENST00000454850 TMEM221A6NGB7 291 aa11.5□□□□□ -0.57
CLCN4-204ENST00000454850 B4E1Z4 1266 aa11.5□□□□□ -0.57
CLCN4-204ENST00000454850 C5orf67F2Z3F1 127 aa11.5□□□□□ -0.57
CLCN4-204ENST00000454850 M0R296 226 aa11.5□□□□□ -0.57
CLCN4-204ENST00000454850 ZNF213O14771 459 aa11.5□□□□□ -0.57
CLCN4-204ENST00000454850 PPP1R11O60927 126 aaPredicted RBP11.5□□□□□ -0.57
CLCN4-204ENST00000454850 CAND2O75155 1236 aa11.5□□□□□ -0.57
CLCN4-204ENST00000454850 GHRP10912 638 aa11.5□□□□□ -0.57
CLCN4-204ENST00000454850 CCND2P30279 289 aa11.5□□□□□ -0.57
CLCN4-204ENST00000454850 HOXC8P31273 242 aa11.5□□□□□ -0.57
CLCN4-204ENST00000454850 PTPN5P54829 565 aa11.5□□□□□ -0.57
CLCN4-204ENST00000454850 ARHGAP4P98171 946 aa11.5□□□□□ -0.57
CLCN4-204ENST00000454850 SP4Q02446 784 aa11.5□□□□□ -0.57
CLCN4-204ENST00000454850 ANKRD45Q5TZF3 282 aa11.5□□□□□ -0.57
CLCN4-204ENST00000454850 FCHSD1Q86WN1 690 aa11.5□□□□□ -0.57
CLCN4-204ENST00000454850 ENAHQ8N8S7 591 aaPredicted RBP11.5□□□□□ -0.57
CLCN4-204ENST00000454850 EDAQ92838 391 aa11.5□□□□□ -0.57
CLCN4-204ENST00000454850 PBXIP1Q96AQ6 731 aa11.5□□□□□ -0.57
CLCN4-204ENST00000454850 ZSCAN10Q96SZ4 725 aaPredicted RBP11.5□□□□□ -0.57
CLCN4-204ENST00000454850 LMAN2LQ9H0V9 348 aa11.5□□□□□ -0.57
CLCN4-204ENST00000454850 ALG13Q9NP73 1137 aaKnown RBP11.5□□□□□ -0.57
CLCN4-204ENST00000454850 RWDD3Q9Y3V2 267 aa11.5□□□□□ -0.57
CLCN4-204ENST00000454850 PCDHA1Q9Y5I3 950 aa11.5□□□□□ -0.57
CLCN4-204ENST00000454850 MYO10Q9HD67 2058 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms