RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 RAVER2Q9HCJ3 691 aaKnown RBP10.98□□□□□ -0.65
CSGALNACT1-203ENST00000454498 TRIM49BA6NDI0 452 aa10.98□□□□□ -0.65
CSGALNACT1-203ENST00000454498 GOLGA6BA6NDN3 693 aa10.98□□□□□ -0.65
CSGALNACT1-203ENST00000454498 E9PMD0 336 aa10.98□□□□□ -0.65
CSGALNACT1-203ENST00000454498 FERP16591 822 aa10.98□□□□□ -0.65
CSGALNACT1-203ENST00000454498 HOXA7P31268 230 aaPredicted RBP10.98□□□□□ -0.65
CSGALNACT1-203ENST00000454498 CYP27A1Q02318 531 aa10.98□□□□□ -0.65
CSGALNACT1-203ENST00000454498 ZNF543Q08ER8 600 aa10.98□□□□□ -0.65
CSGALNACT1-203ENST00000454498 ACRBPQ8NEB7 543 aa10.98□□□□□ -0.65
CSGALNACT1-203ENST00000454498 IPO4Q8TEX9 1081 aaKnown RBP10.98□□□□□ -0.65
CSGALNACT1-203ENST00000454498 JPH2Q9BR39 696 aaPredicted RBP10.98□□□□□ -0.65
CSGALNACT1-203ENST00000454498 POTEB3A0JP26 581 aa10.98□□□□□ -0.65
CSGALNACT1-203ENST00000454498 POTECB2RU33 542 aa10.98□□□□□ -0.65
CSGALNACT1-203ENST00000454498 GAS8O95995 478 aa10.98□□□□□ -0.65
CSGALNACT1-203ENST00000454498 YARSP54577 528 aaKnown RBP10.98□□□□□ -0.65
CSGALNACT1-203ENST00000454498 ORC2Q13416 577 aaPredicted RBP10.98□□□□□ -0.65
CSGALNACT1-203ENST00000454498 CDC42EP5Q6NZY7 148 aa10.98□□□□□ -0.65
CSGALNACT1-203ENST00000454498 MIS18BP1Q6P0N0 1132 aa10.98□□□□□ -0.65
CSGALNACT1-203ENST00000454498 POTEBQ6S5H4 581 aa10.98□□□□□ -0.65
CSGALNACT1-203ENST00000454498 ZNRF3Q9ULT6 936 aa10.98□□□□□ -0.65
CSGALNACT1-203ENST00000454498 ZBTB12Q9Y330 459 aaPredicted RBP10.98□□□□□ -0.65
CSGALNACT1-203ENST00000454498 COL5A2P05997 1499 aaPredicted RBP10.98□□□□□ -0.65
CSGALNACT1-203ENST00000454498 PVALEFA0A1B0GWK0 134 aa10.98□□□□□ -0.65
CSGALNACT1-203ENST00000454498 OSBPP22059 807 aa10.98□□□□□ -0.65
CSGALNACT1-203ENST00000454498 PTK2Q05397 1052 aa10.98□□□□□ -0.65
CSGALNACT1-203ENST00000454498 HHIPL2Q6UWX4 724 aa10.98□□□□□ -0.65
CSGALNACT1-203ENST00000454498 HACE1Q8IYU2 909 aa10.98□□□□□ -0.65
CSGALNACT1-203ENST00000454498 POLD4Q9HCU8 107 aa10.98□□□□□ -0.65
CSGALNACT1-203ENST00000454498 FEZ2Q9UHY8 353 aaPredicted RBP10.98□□□□□ -0.65
CSGALNACT1-203ENST00000454498 FBXO2Q9UK22 296 aaPredicted RBP10.98□□□□□ -0.65
CSGALNACT1-203ENST00000454498 FEM1BQ9UK73 627 aa10.98□□□□□ -0.65
CSGALNACT1-203ENST00000454498 GPR75-ASB3A0A0A6YYF3 556 aa10.97□□□□□ -0.65
CSGALNACT1-203ENST00000454498 KRIT1O00522 736 aa10.97□□□□□ -0.65
CSGALNACT1-203ENST00000454498 GYS1P13807 737 aa10.97□□□□□ -0.65
CSGALNACT1-203ENST00000454498 FGFR2P21802 821 aa10.97□□□□□ -0.65
CSGALNACT1-203ENST00000454498 MXI1P50539 228 aa10.97□□□□□ -0.65
CSGALNACT1-203ENST00000454498 BRD3Q15059 726 aa10.97□□□□□ -0.65
CSGALNACT1-203ENST00000454498 CLUL1Q15846 466 aa10.97□□□□□ -0.65
CSGALNACT1-203ENST00000454498 KCNB2Q92953 911 aa10.97□□□□□ -0.65
CSGALNACT1-203ENST00000454498 RNF34Q969K3 372 aa10.97□□□□□ -0.65
CSGALNACT1-203ENST00000454498 PHF20Q9BVI0 1012 aa10.97□□□□□ -0.65
CSGALNACT1-203ENST00000454498 FAM204AQ9H8W3 233 aa10.97□□□□□ -0.65
CSGALNACT1-203ENST00000454498 GCNT4Q9P109 453 aa10.97□□□□□ -0.65
CSGALNACT1-203ENST00000454498 NDUFA10O95299 355 aa10.97□□□□□ -0.65
CSGALNACT1-203ENST00000454498 CNGA1P29973 690 aa10.97□□□□□ -0.65
CSGALNACT1-203ENST00000454498 MTMR1Q13613 665 aa10.97□□□□□ -0.65
CSGALNACT1-203ENST00000454498 RNF169Q8NCN4 708 aa10.97□□□□□ -0.65
CSGALNACT1-203ENST00000454498 PDLIM2Q96JY6 352 aa10.97□□□□□ -0.65
CSGALNACT1-203ENST00000454498 PANX2Q96RD6 677 aa10.97□□□□□ -0.65
CSGALNACT1-203ENST00000454498 MMS19Q96T76 1030 aa10.97□□□□□ -0.65
CSGALNACT1-203ENST00000454498 RNF146Q9NTX7 359 aa10.97□□□□□ -0.65
CSGALNACT1-203ENST00000454498 HPS5Q9UPZ3 1129 aa10.97□□□□□ -0.65
CSGALNACT1-203ENST00000454498 ADGRB2O60241 1585 aa10.97□□□□□ -0.65
CSGALNACT1-203ENST00000454498 NDUFB10O96000 172 aa10.97□□□□□ -0.65
CSGALNACT1-203ENST00000454498 TROAPQ12815 778 aa10.97□□□□□ -0.65
CSGALNACT1-203ENST00000454498 PPP4R3CPQ6ZMV5 832 aa10.97□□□□□ -0.65
CSGALNACT1-203ENST00000454498 TXNRD3Q86VQ6 643 aa10.97□□□□□ -0.65
CSGALNACT1-203ENST00000454498 OTUD6BQ8N6M0 293 aa10.97□□□□□ -0.65
CSGALNACT1-203ENST00000454498 FAM133AQ8N9E0 248 aa10.97□□□□□ -0.65
CSGALNACT1-203ENST00000454498 GOLGA6CA6NDK9 693 aa10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 PSAPP07602 524 aa10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 GOLGA6DP0CG33 693 aa10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 EIF4A3P38919 411 aaKnown RBP10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 NSFP46459 744 aaKnown RBP10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 MFAP3P55082 362 aa10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 PEX3P56589 373 aa10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 LACTBP83111 547 aaPredicted RBP10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 TFDP1Q14186 410 aa10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 RASA3Q14644 834 aa10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 SNRNP48Q6IEG0 339 aaKnown RBP10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 C16orf86Q6ZW13 317 aa10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 USP49Q70CQ1 688 aa10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 MB21D1Q8N884 522 aa10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 PLCD4Q9BRC7 762 aa10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 SPTLC3Q9NUV7 552 aa10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 GOLGA6AQ9NYA3 693 aa10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 POTEFA5A3E0 1075 aa10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 E7EVH7 732 aa10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 MFAP3LO75121 409 aa10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 IFNB1P01574 187 aa10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 POTEIP0CG38 1075 aa10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 LMNB1P20700 586 aa10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 BPIFB4P59827 614 aa10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 PPP4CP60510 307 aa10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 POTEGQ6S5H5 508 aa10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 POTEEQ6S8J3 1075 aa10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 RUFY4Q6ZNE9 571 aa10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 ADAT2Q7Z6V5 191 aaKnown RBP10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 METTL16Q86W50 562 aaKnown RBP10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 SFR1Q86XK3 245 aa10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 CCDC170Q8IYT3 715 aa10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 CCDC63Q8NA47 563 aa10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 SLC10A4Q96EP9 437 aa10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 HOXC10Q9NYD6 342 aa10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 FAM169AQ9Y6X4 670 aa10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 BCL9O00512 1426 aa10.96□□□□□ -0.65
CSGALNACT1-203ENST00000454498 KDM4FA0A1W2PPD8 638 aa10.96□□□□□ -0.66
CSGALNACT1-203ENST00000454498 LGALS16A8MUM7 142 aa10.96□□□□□ -0.66
CSGALNACT1-203ENST00000454498 DAPK3O43293 454 aa10.96□□□□□ -0.66
CSGALNACT1-203ENST00000454498 PIK3CAP42336 1068 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms