RNA–Protein interactions for RNA: ENST00000454441.2

LINC01287-203, Transcript of long intergenic non-protein coding RNA 1287, humanhuman

TSL 5 BASIC

Gene LINC01287, Length 1,007 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01287-203ENST00000454441 ZNF200P98182 395 aaPredicted RBP13.68□□□□□ -0.22
LINC01287-203ENST00000454441 RBL2Q08999 1139 aa13.68□□□□□ -0.22
LINC01287-203ENST00000454441 PTK7Q13308 1070 aa13.68□□□□□ -0.22
LINC01287-203ENST00000454441 UBE2SQ16763 222 aa13.68□□□□□ -0.22
LINC01287-203ENST00000454441 ADCK5Q3MIX3 580 aa13.68□□□□□ -0.22
LINC01287-203ENST00000454441 TSGA10IPQ3SY00 556 aa13.68□□□□□ -0.22
LINC01287-203ENST00000454441 PPP2R2DQ66LE6 453 aa13.68□□□□□ -0.22
LINC01287-203ENST00000454441 XRRA1Q6P2D8 792 aa13.68□□□□□ -0.22
LINC01287-203ENST00000454441 CYFIP1Q7L576 1253 aa13.68□□□□□ -0.22
LINC01287-203ENST00000454441 HEATR3Q7Z4Q2 680 aa13.68□□□□□ -0.22
LINC01287-203ENST00000454441 NLRX1Q86UT6 975 aa13.68□□□□□ -0.22
LINC01287-203ENST00000454441 RASEFQ8IZ41 740 aa13.68□□□□□ -0.22
LINC01287-203ENST00000454441 SLC9A7Q96T83 725 aa13.68□□□□□ -0.22
LINC01287-203ENST00000454441 PRDM12Q9H4Q4 367 aa13.68□□□□□ -0.22
LINC01287-203ENST00000454441 BCAS3Q9H6U6 928 aa13.68□□□□□ -0.22
LINC01287-203ENST00000454441 PCDHA11Q9Y5I1 949 aa13.68□□□□□ -0.22
LINC01287-203ENST00000454441 CNTNAP5Q8WYK1 1306 aa13.67□□□□□ -0.22
LINC01287-203ENST00000454441 SPDYE3A6NKU9 549 aa13.67□□□□□ -0.22
LINC01287-203ENST00000454441 H3BRB1 525 aa13.67□□□□□ -0.22
LINC01287-203ENST00000454441 ZBTB43O43298 467 aa13.67□□□□□ -0.22
LINC01287-203ENST00000454441 BAIAP3O94812 1187 aa13.67□□□□□ -0.22
LINC01287-203ENST00000454441 PARNO95453 639 aaKnown RBP13.67□□□□□ -0.22
LINC01287-203ENST00000454441 PRR29P0C7W0 189 aa13.67□□□□□ -0.22
LINC01287-203ENST00000454441 MYOGP15173 224 aa13.67□□□□□ -0.22
LINC01287-203ENST00000454441 EXOSC10Q01780 885 aaKnown RBP13.67□□□□□ -0.22
LINC01287-203ENST00000454441 SP4Q02446 784 aa13.67□□□□□ -0.22
LINC01287-203ENST00000454441 RTN1Q16799 776 aa13.67□□□□□ -0.22
LINC01287-203ENST00000454441 USP26Q9BXU7 913 aa13.67□□□□□ -0.22
LINC01287-203ENST00000454441 TUT1Q9H6E5 874 aaKnown RBP13.67□□□□□ -0.22
LINC01287-203ENST00000454441 BRPF3Q9ULD4 1205 aa13.67□□□□□ -0.22
LINC01287-203ENST00000454441 CHD9Q3L8U1 2897 aa13.66□□□□□ -0.22
LINC01287-203ENST00000454441 MICAL3Q7RTP6 2002 aa13.66□□□□□ -0.22
LINC01287-203ENST00000454441 KLF18A0A0U1RQI7 1052 aa13.66□□□□□ -0.22
LINC01287-203ENST00000454441 C17orf102A2RUQ5 167 aa13.66□□□□□ -0.22
LINC01287-203ENST00000454441 C19orf67A6NJJ6 358 aa13.66□□□□□ -0.22
LINC01287-203ENST00000454441 HMGB1P09429 215 aaKnown RBP13.66□□□□□ -0.22
LINC01287-203ENST00000454441 KCNJ6P48051 423 aa13.66□□□□□ -0.22
LINC01287-203ENST00000454441 FGD1P98174 961 aa13.66□□□□□ -0.22
LINC01287-203ENST00000454441 HIC1Q14526 733 aa13.66□□□□□ -0.22
LINC01287-203ENST00000454441 PHOSPHO2Q8TCD6 241 aa13.66□□□□□ -0.22
LINC01287-203ENST00000454441 WNT8BQ93098 351 aa13.66□□□□□ -0.22
LINC01287-203ENST00000454441 GPRASP2Q96D09 838 aa13.66□□□□□ -0.22
LINC01287-203ENST00000454441 GPR20Q99678 358 aa13.66□□□□□ -0.22
LINC01287-203ENST00000454441 SENP7Q9BQF6 1050 aa13.66□□□□□ -0.22
LINC01287-203ENST00000454441 ZNF215Q9UL58 517 aaPredicted RBP13.66□□□□□ -0.22
LINC01287-203ENST00000454441 NAP1L2Q9ULW6 460 aaPredicted RBP13.66□□□□□ -0.22
LINC01287-203ENST00000454441 GOLGA8AA7E2F4 631 aa13.65□□□□□ -0.22
LINC01287-203ENST00000454441 GOLGA8BA8MQT2 603 aa13.65□□□□□ -0.22
LINC01287-203ENST00000454441 NBNO60934 754 aa13.65□□□□□ -0.22
LINC01287-203ENST00000454441 CA3P07451 260 aa13.65□□□□□ -0.22
LINC01287-203ENST00000454441 SMIM10L2AP0DMW4 78 aa13.65□□□□□ -0.22
LINC01287-203ENST00000454441 SMIM10L2BP0DMW5 78 aa13.65□□□□□ -0.22
LINC01287-203ENST00000454441 NAPAP54920 295 aa13.65□□□□□ -0.22
LINC01287-203ENST00000454441 GPNMBQ14956 572 aa13.65□□□□□ -0.22
LINC01287-203ENST00000454441 TRIM71Q2Q1W2 868 aaKnown RBP13.65□□□□□ -0.22
LINC01287-203ENST00000454441 ZNF618Q5T7W0 954 aa13.65□□□□□ -0.22
LINC01287-203ENST00000454441 UTP14CQ5TAP6 766 aaKnown RBP13.65□□□□□ -0.22
LINC01287-203ENST00000454441 WWC2Q6AWC2 1192 aa13.65□□□□□ -0.22
LINC01287-203ENST00000454441 CNKSR3Q6P9H4 555 aa13.65□□□□□ -0.22
LINC01287-203ENST00000454441 TRIM50Q86XT4 487 aa13.65□□□□□ -0.22
LINC01287-203ENST00000454441 GIMAP8Q8ND71 665 aaPredicted RBP13.65□□□□□ -0.22
LINC01287-203ENST00000454441 ATP6V0A1Q93050 837 aa13.65□□□□□ -0.22
LINC01287-203ENST00000454441 CDHR1Q96JP9 859 aa13.65□□□□□ -0.22
LINC01287-203ENST00000454441 EHMT1Q9H9B1 1298 aa13.65□□□□□ -0.22
LINC01287-203ENST00000454441 PCDHA6Q9UN73 950 aa13.65□□□□□ -0.22
LINC01287-203ENST00000454441 PCDHA8Q9Y5H6 950 aa13.65□□□□□ -0.22
LINC01287-203ENST00000454441 CHD7Q9P2D1 2997 aa13.65□□□□□ -0.22
LINC01287-203ENST00000454441 VCANP13611 3396 aa13.64□□□□□ -0.23
LINC01287-203ENST00000454441 KIF28PB7ZC32 967 aa13.64□□□□□ -0.23
LINC01287-203ENST00000454441 CXCL10P02778 98 aa13.64□□□□□ -0.23
LINC01287-203ENST00000454441 CPA1P15085 419 aa13.64□□□□□ -0.23
LINC01287-203ENST00000454441 ITGB5P18084 799 aa13.64□□□□□ -0.23
LINC01287-203ENST00000454441 IGFBP4P22692 258 aa13.64□□□□□ -0.23
LINC01287-203ENST00000454441 THPOP40225 353 aa13.64□□□□□ -0.23
LINC01287-203ENST00000454441 WDR5P61964 334 aaKnown RBP13.64□□□□□ -0.23
LINC01287-203ENST00000454441 MTMR1Q13613 665 aa13.64□□□□□ -0.23
LINC01287-203ENST00000454441 PPP1R18Q6NYC8 613 aa13.64□□□□□ -0.23
LINC01287-203ENST00000454441 TRAF7Q6Q0C0 670 aa13.64□□□□□ -0.23
LINC01287-203ENST00000454441 SERINC5Q86VE9 423 aa13.64□□□□□ -0.23
LINC01287-203ENST00000454441 HERC6Q8IVU3 1022 aa13.64□□□□□ -0.23
LINC01287-203ENST00000454441 USP38Q8NB14 1042 aa13.64□□□□□ -0.23
LINC01287-203ENST00000454441 PPM1EQ8WY54 764 aa13.64□□□□□ -0.23
LINC01287-203ENST00000454441 JAKMIP1Q96N16 626 aaKnown RBP13.64□□□□□ -0.23
LINC01287-203ENST00000454441 RNPEPQ9H4A4 650 aa13.64□□□□□ -0.23
LINC01287-203ENST00000454441 PKD2L1Q9P0L9 805 aa13.64□□□□□ -0.23
LINC01287-203ENST00000454441 TELO2Q9Y4R8 837 aa13.64□□□□□ -0.23
LINC01287-203ENST00000454441 V9GY48 417 aaPredicted RBP13.64□□□□□ -0.23
LINC01287-203ENST00000454441 hCG_1984214I3L0E3 225 aa13.63□□□□□ -0.23
LINC01287-203ENST00000454441 TREHO43280 583 aa13.63□□□□□ -0.23
LINC01287-203ENST00000454441 ATP9AO75110 1047 aa13.63□□□□□ -0.23
LINC01287-203ENST00000454441 GNAT1P11488 350 aa13.63□□□□□ -0.23
LINC01287-203ENST00000454441 KCNA2P16389 499 aa13.63□□□□□ -0.23
LINC01287-203ENST00000454441 CDC27P30260 824 aa13.63□□□□□ -0.23
LINC01287-203ENST00000454441 HOXC8P31273 242 aa13.63□□□□□ -0.23
LINC01287-203ENST00000454441 HSPA4P34932 840 aa13.63□□□□□ -0.23
LINC01287-203ENST00000454441 TCF7P36402 384 aaPredicted RBP13.63□□□□□ -0.23
LINC01287-203ENST00000454441 METAP2P50579 478 aaKnown RBP eCLIP13.63□□□□□ -0.23
LINC01287-203ENST00000454441 ADCY7P51828 1080 aa13.63□□□□□ -0.23
LINC01287-203ENST00000454441 RCAN1P53805 252 aa13.63□□□□□ -0.23
LINC01287-203ENST00000454441 FUT2Q10981 343 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms