RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 CHD1LQ86WJ1 897 aa13.54□□□□□ -0.24
HERC3-207ENST00000452979 GJD3Q8N144 294 aa13.54□□□□□ -0.24
HERC3-207ENST00000452979 IL31RAQ8NI17 732 aa13.54□□□□□ -0.24
HERC3-207ENST00000452979 NEK9Q8TD19 979 aa13.54□□□□□ -0.24
HERC3-207ENST00000452979 ATP6V0A1Q93050 837 aa13.54□□□□□ -0.24
HERC3-207ENST00000452979 RNPEPQ9H4A4 650 aa13.54□□□□□ -0.24
HERC3-207ENST00000452979 TUT1Q9H6E5 874 aaKnown RBP13.54□□□□□ -0.24
HERC3-207ENST00000452979 RIOX1Q9H6W3 641 aa13.54□□□□□ -0.24
HERC3-207ENST00000452979 MLXIPQ9HAP2 919 aa13.54□□□□□ -0.24
HERC3-207ENST00000452979 DIAPH3Q9NSV4 1193 aa13.54□□□□□ -0.24
HERC3-207ENST00000452979 RALGAPA2Q2PPJ7 1873 aa13.54□□□□□ -0.24
HERC3-207ENST00000452979 NLRC5Q86WI3 1866 aa13.54□□□□□ -0.24
HERC3-207ENST00000452979 BRWD1Q9NSI6 2320 aa13.53□□□□□ -0.24
HERC3-207ENST00000452979 H3BNC9 293 aa13.53□□□□□ -0.24
HERC3-207ENST00000452979 GCOM1H8Y6P7 765 aaPredicted RBP13.53□□□□□ -0.24
HERC3-207ENST00000452979 RBAK-RBAKDNI3L0D1 243 aa13.53□□□□□ -0.24
HERC3-207ENST00000452979 TREHO43280 583 aa13.53□□□□□ -0.24
HERC3-207ENST00000452979 POLR2MP0CAP2 368 aa13.53□□□□□ -0.24
HERC3-207ENST00000452979 SMIM10L2AP0DMW4 78 aa13.53□□□□□ -0.24
HERC3-207ENST00000452979 SMIM10L2BP0DMW5 78 aa13.53□□□□□ -0.24
HERC3-207ENST00000452979 ICAM3P32942 547 aa13.53□□□□□ -0.24
HERC3-207ENST00000452979 NUCB1Q02818 461 aa13.53□□□□□ -0.24
HERC3-207ENST00000452979 COL19A1Q14993 1142 aa13.53□□□□□ -0.24
HERC3-207ENST00000452979 PTPROQ16827 1216 aa13.53□□□□□ -0.24
HERC3-207ENST00000452979 SLC35G1Q2M3R5 365 aa13.53□□□□□ -0.24
HERC3-207ENST00000452979 B4GALNT3Q6L9W6 998 aa13.53□□□□□ -0.24
HERC3-207ENST00000452979 MYOCDQ8IZQ8 938 aa13.53□□□□□ -0.24
HERC3-207ENST00000452979 SEPT8Q92599 483 aa13.53□□□□□ -0.24
HERC3-207ENST00000452979 GPKOWQ92917 476 aaPredicted RBP eCLIP13.53□□□□□ -0.24
HERC3-207ENST00000452979 USP26Q9BXU7 913 aa13.53□□□□□ -0.24
HERC3-207ENST00000452979 RWDD1Q9H446 243 aaPredicted RBP13.53□□□□□ -0.24
HERC3-207ENST00000452979 BCAS3Q9H6U6 928 aa13.53□□□□□ -0.24
HERC3-207ENST00000452979 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.52□□□□□ -0.25
HERC3-207ENST00000452979 FAM86C2PA6NEL3 165 aa13.52□□□□□ -0.25
HERC3-207ENST00000452979 PRR33A8MZF0 331 aa13.52□□□□□ -0.25
HERC3-207ENST00000452979 SPATA31C2B4DYI2 1134 aa13.52□□□□□ -0.25
HERC3-207ENST00000452979 STAM2O75886 525 aa13.52□□□□□ -0.25
HERC3-207ENST00000452979 LGALS2P05162 132 aa13.52□□□□□ -0.25
HERC3-207ENST00000452979 IL9P15248 144 aa13.52□□□□□ -0.25
HERC3-207ENST00000452979 MRPS9P82933 396 aaKnown RBP13.52□□□□□ -0.25
HERC3-207ENST00000452979 FAM26DQ5JW98 314 aa13.52□□□□□ -0.25
HERC3-207ENST00000452979 PTCRAQ6ISU1 281 aaPredicted RBP13.52□□□□□ -0.25
HERC3-207ENST00000452979 CYB5R4Q7L1T6 521 aa13.52□□□□□ -0.25
HERC3-207ENST00000452979 OSBPL7Q9BZF2 842 aa13.52□□□□□ -0.25
HERC3-207ENST00000452979 GTF3C3Q9Y5Q9 886 aa13.52□□□□□ -0.25
HERC3-207ENST00000452979 FRMPD4Q14CM0 1322 aa13.52□□□□□ -0.25
HERC3-207ENST00000452979 DOCK5Q9H7D0 1870 aa13.51□□□□□ -0.25
HERC3-207ENST00000452979 SORBS3O60504 671 aa13.51□□□□□ -0.25
HERC3-207ENST00000452979 GNAT1P11488 350 aa13.51□□□□□ -0.25
HERC3-207ENST00000452979 ALADP13716 330 aa13.51□□□□□ -0.25
HERC3-207ENST00000452979 ADAM17P78536 824 aa13.51□□□□□ -0.25
HERC3-207ENST00000452979 GPM6BQ13491 265 aa13.51□□□□□ -0.25
HERC3-207ENST00000452979 NEDD9Q14511 834 aa13.51□□□□□ -0.25
HERC3-207ENST00000452979 GRM4Q14833 912 aa13.51□□□□□ -0.25
HERC3-207ENST00000452979 GNPTABQ3T906 1256 aa13.51□□□□□ -0.25
HERC3-207ENST00000452979 TIGD5Q53EQ6 642 aa13.51□□□□□ -0.25
HERC3-207ENST00000452979 METTL7BQ6UX53 244 aa13.51□□□□□ -0.25
HERC3-207ENST00000452979 TMEM192Q8IY95 271 aa13.51□□□□□ -0.25
HERC3-207ENST00000452979 BANK1Q8NDB2 785 aa13.51□□□□□ -0.25
HERC3-207ENST00000452979 APBB2Q92870 758 aa13.51□□□□□ -0.25
HERC3-207ENST00000452979 PABPC5Q96DU9 382 aaKnown RBP13.51□□□□□ -0.25
HERC3-207ENST00000452979 ZFP91Q96JP5 570 aaPredicted RBP13.51□□□□□ -0.25
HERC3-207ENST00000452979 INPP4AQ96PE3 977 aaPredicted RBP13.51□□□□□ -0.25
HERC3-207ENST00000452979 PIGSQ96S52 555 aa13.51□□□□□ -0.25
HERC3-207ENST00000452979 GPR20Q99678 358 aa13.51□□□□□ -0.25
HERC3-207ENST00000452979 PPP4R2Q9NY27 417 aa13.51□□□□□ -0.25
HERC3-207ENST00000452979 PNMA6FA0A0J9YX94 578 aa13.5□□□□□ -0.25
HERC3-207ENST00000452979 POTEB3A0JP26 581 aa13.5□□□□□ -0.25
HERC3-207ENST00000452979 CYTH3O43739 400 aa13.5□□□□□ -0.25
HERC3-207ENST00000452979 POTEBQ6S5H4 581 aa13.5□□□□□ -0.25
HERC3-207ENST00000452979 FCHSD1Q86WN1 690 aa13.5□□□□□ -0.25
HERC3-207ENST00000452979 HOMER1Q86YM7 354 aa13.5□□□□□ -0.25
HERC3-207ENST00000452979 YME1L1Q96TA2 773 aa13.5□□□□□ -0.25
HERC3-207ENST00000452979 ATG2AQ2TAZ0 1938 aa13.49□□□□□ -0.25
HERC3-207ENST00000452979 C5orf67F2Z3F1 127 aa13.49□□□□□ -0.25
HERC3-207ENST00000452979 NOP56O00567 594 aaKnown RBP13.49□□□□□ -0.25
HERC3-207ENST00000452979 FIBPO43427 364 aa13.49□□□□□ -0.25
HERC3-207ENST00000452979 UPP2O95045 317 aa13.49□□□□□ -0.25
HERC3-207ENST00000452979 TROAPQ12815 778 aa13.49□□□□□ -0.25
HERC3-207ENST00000452979 SEMA3FQ13275 785 aa13.49□□□□□ -0.25
HERC3-207ENST00000452979 CYFIP1Q7L576 1253 aa13.49□□□□□ -0.25
HERC3-207ENST00000452979 RPAINQ86UA6 219 aa13.49□□□□□ -0.25
HERC3-207ENST00000452979 CCDC136Q96JN2 1154 aa13.49□□□□□ -0.25
HERC3-207ENST00000452979 SENP7Q9BQF6 1050 aa13.49□□□□□ -0.25
HERC3-207ENST00000452979 IL25Q9H293 177 aa13.49□□□□□ -0.25
HERC3-207ENST00000452979 NSUN3Q9H649 340 aaKnown RBP13.49□□□□□ -0.25
HERC3-207ENST00000452979 SETD4Q9NVD3 440 aa13.49□□□□□ -0.25
HERC3-207ENST00000452979 PRKAG3Q9UGI9 489 aa13.49□□□□□ -0.25
HERC3-207ENST00000452979 KAT6AQ92794 2004 aa13.49□□□□□ -0.25
HERC3-207ENST00000452979 BAZ2BQ9UIF8 2168 aaKnown RBP13.48□□□□□ -0.25
HERC3-207ENST00000452979 C19orf67A6NJJ6 358 aa13.48□□□□□ -0.25
HERC3-207ENST00000452979 H3BQ06 376 aaPredicted RBP13.48□□□□□ -0.25
HERC3-207ENST00000452979 NCK2O43639 380 aa13.48□□□□□ -0.25
HERC3-207ENST00000452979 RB1P06400 928 aa13.48□□□□□ -0.25
HERC3-207ENST00000452979 SSTR3P32745 418 aaPredicted RBP13.48□□□□□ -0.25
HERC3-207ENST00000452979 TRDNQ13061 729 aa13.48□□□□□ -0.25
HERC3-207ENST00000452979 TCEAL5Q5H9L2 206 aa13.48□□□□□ -0.25
HERC3-207ENST00000452979 LMBR1Q8WVP7 490 aa13.48□□□□□ -0.25
HERC3-207ENST00000452979 IL17RAQ96F46 866 aa13.48□□□□□ -0.25
HERC3-207ENST00000452979 EHMT1Q9H9B1 1298 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms