RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 FARP2O94887 1054 aaPredicted RBP14.76□□□□□ -0.05
VPS33A-202ENST00000451053 C6orf222P0C671 652 aaPredicted RBP14.76□□□□□ -0.05
VPS33A-202ENST00000451053 GJA8P48165 433 aa14.76□□□□□ -0.05
VPS33A-202ENST00000451053 GJA9P57773 515 aa14.76□□□□□ -0.05
VPS33A-202ENST00000451053 BEX3Q00994 111 aa14.76□□□□□ -0.05
VPS33A-202ENST00000451053 NEDD9Q14511 834 aa14.76□□□□□ -0.05
VPS33A-202ENST00000451053 RILPL1Q5EBL4 403 aa14.76□□□□□ -0.05
VPS33A-202ENST00000451053 FAM173BQ6P4H8 233 aa14.76□□□□□ -0.05
VPS33A-202ENST00000451053 DHX37Q8IY37 1157 aaKnown RBP14.76□□□□□ -0.05
VPS33A-202ENST00000451053 ETNPPLQ8TBG4 499 aa14.76□□□□□ -0.05
VPS33A-202ENST00000451053 GBP4Q96PP9 640 aa14.76□□□□□ -0.05
VPS33A-202ENST00000451053 AP5M1Q9H0R1 490 aa14.76□□□□□ -0.05
VPS33A-202ENST00000451053 KCNMB3Q9NPA1 279 aa14.76□□□□□ -0.05
VPS33A-202ENST00000451053 ZDHHC9Q9Y397 364 aa14.76□□□□□ -0.05
VPS33A-202ENST00000451053 PCDHB6Q9Y5E3 794 aa14.76□□□□□ -0.05
VPS33A-202ENST00000451053 DDX39AO00148 427 aaKnown RBP14.75□□□□□ -0.05
VPS33A-202ENST00000451053 DHX15O43143 795 aaKnown RBP14.75□□□□□ -0.05
VPS33A-202ENST00000451053 NEMFO60524 1076 aa14.75□□□□□ -0.05
VPS33A-202ENST00000451053 TFRCP02786 760 aaKnown RBP14.75□□□□□ -0.05
VPS33A-202ENST00000451053 MYCNP04198 464 aaPredicted RBP14.75□□□□□ -0.05
VPS33A-202ENST00000451053 NKX3-2P78367 333 aa14.75□□□□□ -0.05
VPS33A-202ENST00000451053 SP4Q02446 784 aa14.75□□□□□ -0.05
VPS33A-202ENST00000451053 LAMC2Q13753 1193 aa14.75□□□□□ -0.05
VPS33A-202ENST00000451053 LRRC41Q15345 812 aa14.75□□□□□ -0.05
VPS33A-202ENST00000451053 METTL7BQ6UX53 244 aa14.75□□□□□ -0.05
VPS33A-202ENST00000451053 KLHDC9Q8NEP7 349 aa14.75□□□□□ -0.05
VPS33A-202ENST00000451053 AFG1LQ8WV93 481 aa14.75□□□□□ -0.05
VPS33A-202ENST00000451053 HAS1Q92839 578 aa14.75□□□□□ -0.05
VPS33A-202ENST00000451053 SLC5A5Q92911 643 aa14.75□□□□□ -0.05
VPS33A-202ENST00000451053 TNPO1Q92973 898 aaKnown RBP14.75□□□□□ -0.05
VPS33A-202ENST00000451053 EMID1Q96A84 441 aaPredicted RBP14.75□□□□□ -0.05
VPS33A-202ENST00000451053 SPATA33Q96N06 139 aa14.75□□□□□ -0.05
VPS33A-202ENST00000451053 TMEM60Q9H2L4 133 aa14.75□□□□□ -0.05
VPS33A-202ENST00000451053 MLXIPQ9HAP2 919 aa14.75□□□□□ -0.05
VPS33A-202ENST00000451053 NFASCO94856 1347 aa14.74□□□□□ -0.05
VPS33A-202ENST00000451053 CCDC85CA6NKD9 419 aa14.74□□□□□ -0.05
VPS33A-202ENST00000451053 CST5P28325 142 aaPredicted RBP14.74□□□□□ -0.05
VPS33A-202ENST00000451053 SOX10P56693 466 aa14.74□□□□□ -0.05
VPS33A-202ENST00000451053 CALCRLQ16602 461 aa14.74□□□□□ -0.05
VPS33A-202ENST00000451053 FSCN1Q16658 493 aaKnown RBP14.74□□□□□ -0.05
VPS33A-202ENST00000451053 HSDL1Q3SXM5 330 aa14.74□□□□□ -0.05
VPS33A-202ENST00000451053 GNASQ5JWF2 1037 aa14.74□□□□□ -0.05
VPS33A-202ENST00000451053 GIMAP8Q8ND71 665 aaPredicted RBP14.74□□□□□ -0.05
VPS33A-202ENST00000451053 SDF4Q9BRK5 362 aa14.74□□□□□ -0.05
VPS33A-202ENST00000451053 SPC25Q9HBM1 224 aa14.74□□□□□ -0.05
VPS33A-202ENST00000451053 JPH1Q9HDC5 661 aaPredicted RBP14.74□□□□□ -0.05
VPS33A-202ENST00000451053 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.74□□□□□ -0.05
VPS33A-202ENST00000451053 A6NJR5 290 aa14.73□□□□□ -0.05
VPS33A-202ENST00000451053 PSMD10O75832 226 aa14.73□□□□□ -0.05
VPS33A-202ENST00000451053 CCNE2O96020 404 aa14.73□□□□□ -0.05
VPS33A-202ENST00000451053 MMP3P08254 477 aa14.73□□□□□ -0.05
VPS33A-202ENST00000451053 EN2P19622 333 aaPredicted RBP14.73□□□□□ -0.05
VPS33A-202ENST00000451053 MNX1P50219 401 aaPredicted RBP14.73□□□□□ -0.05
VPS33A-202ENST00000451053 ORC2Q13416 577 aaPredicted RBP14.73□□□□□ -0.05
VPS33A-202ENST00000451053 LRCH2Q5VUJ6 765 aa14.73□□□□□ -0.05
VPS33A-202ENST00000451053 CCSAPQ6IQ19 270 aaPredicted RBP14.73□□□□□ -0.05
VPS33A-202ENST00000451053 RNF180Q86T96 592 aa14.73□□□□□ -0.05
VPS33A-202ENST00000451053 C4orf32Q8N8J7 132 aa14.73□□□□□ -0.05
VPS33A-202ENST00000451053 ARRDC4Q8NCT1 418 aa14.73□□□□□ -0.05
VPS33A-202ENST00000451053 PPTC7Q8NI37 304 aa14.73□□□□□ -0.05
VPS33A-202ENST00000451053 MTMR9Q96QG7 549 aa14.73□□□□□ -0.05
VPS33A-202ENST00000451053 RIT2Q99578 217 aa14.73□□□□□ -0.05
VPS33A-202ENST00000451053 GPR20Q99678 358 aa14.73□□□□□ -0.05
VPS33A-202ENST00000451053 FTOQ9C0B1 505 aaKnown RBP eCLIP14.73□□□□□ -0.05
VPS33A-202ENST00000451053 TBC1D22BQ9NU19 505 aa14.73□□□□□ -0.05
VPS33A-202ENST00000451053 SLC9A2Q9UBY0 812 aa14.73□□□□□ -0.05
VPS33A-202ENST00000451053 TCHHQ07283 1943 aa14.72□□□□□ -0.05
VPS33A-202ENST00000451053 TBX3O15119 743 aa14.72□□□□□ -0.05
VPS33A-202ENST00000451053 MARCH6O60337 910 aa14.72□□□□□ -0.05
VPS33A-202ENST00000451053 GAS7O60861 476 aa14.72□□□□□ -0.05
VPS33A-202ENST00000451053 CPT1AP50416 773 aa14.72□□□□□ -0.05
VPS33A-202ENST00000451053 KCNA10Q16322 511 aa14.72□□□□□ -0.05
VPS33A-202ENST00000451053 FOXD4L6Q3SYB3 417 aaPredicted RBP14.72□□□□□ -0.05
VPS33A-202ENST00000451053 ATL3Q6DD88 541 aa14.72□□□□□ -0.05
VPS33A-202ENST00000451053 FOXD4L3Q6VB84 417 aaPredicted RBP14.72□□□□□ -0.05
VPS33A-202ENST00000451053 CLEC17AQ6ZS10 378 aa14.72□□□□□ -0.05
VPS33A-202ENST00000451053 DIS3LQ8TF46 1054 aaKnown RBP14.72□□□□□ -0.05
VPS33A-202ENST00000451053 FAM20AQ96MK3 541 aa14.72□□□□□ -0.05
VPS33A-202ENST00000451053 TEKT3Q9BXF9 490 aa14.72□□□□□ -0.05
VPS33A-202ENST00000451053 UNC45AQ9H3U1 944 aa14.72□□□□□ -0.05
VPS33A-202ENST00000451053 GSTTP1A0A1W2PQM5 241 aa14.71□□□□□ -0.05
VPS33A-202ENST00000451053 KBTBD13C9JR72 458 aa14.71□□□□□ -0.05
VPS33A-202ENST00000451053 GOLGA6L22H0YM25 854 aa14.71□□□□□ -0.05
VPS33A-202ENST00000451053 DNM1LO00429 736 aa14.71□□□□□ -0.05
VPS33A-202ENST00000451053 NOP56O00567 594 aaKnown RBP14.71□□□□□ -0.05
VPS33A-202ENST00000451053 CHMP2AO43633 222 aa14.71□□□□□ -0.05
VPS33A-202ENST00000451053 BAG4O95429 457 aaKnown RBP14.71□□□□□ -0.05
VPS33A-202ENST00000451053 ASGR1P07306 291 aa14.71□□□□□ -0.05
VPS33A-202ENST00000451053 MYL3P08590 195 aa14.71□□□□□ -0.05
VPS33A-202ENST00000451053 OR52Z1P0C646 297 aa14.71□□□□□ -0.05
VPS33A-202ENST00000451053 HOXD8P13378 290 aaPredicted RBP14.71□□□□□ -0.05
VPS33A-202ENST00000451053 ACTR2P61160 394 aa14.71□□□□□ -0.05
VPS33A-202ENST00000451053 PTGDRQ13258 359 aa14.71□□□□□ -0.05
VPS33A-202ENST00000451053 SLFN12Q8IYM2 578 aa14.71□□□□□ -0.05
VPS33A-202ENST00000451053 ZNF396Q96N95 335 aaPredicted RBP14.71□□□□□ -0.05
VPS33A-202ENST00000451053 VAV3Q9UKW4 847 aa14.71□□□□□ -0.05
VPS33A-202ENST00000451053 CLIC4Q9Y696 253 aa14.71□□□□□ -0.05
VPS33A-202ENST00000451053 ELP1O95163 1332 aa14.7□□□□□ -0.06
VPS33A-202ENST00000451053 ZNF286BP0CG31 522 aa14.7□□□□□ -0.06
VPS33A-202ENST00000451053 TCF7P36402 384 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms