RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 USP17L11C9JVI0 530 aa7.81□□□□□ -1.16
BEST1-202ENST00000449131 USP17L18D6R9N7 530 aa7.81□□□□□ -1.16
BEST1-202ENST00000449131 USP17L22D6RA61 530 aa7.81□□□□□ -1.16
BEST1-202ENST00000449131 USP17L17D6RBQ6 530 aa7.81□□□□□ -1.16
BEST1-202ENST00000449131 USP17L19D6RCP7 530 aa7.81□□□□□ -1.16
BEST1-202ENST00000449131 USP17L20D6RJB6 530 aa7.81□□□□□ -1.16
BEST1-202ENST00000449131 ARHGAP25P42331 645 aa7.81□□□□□ -1.16
BEST1-202ENST00000449131 USP17L24Q0WX57 530 aa7.81□□□□□ -1.16
BEST1-202ENST00000449131 GRM4Q14833 912 aa7.81□□□□□ -1.16
BEST1-202ENST00000449131 CLUL1Q15846 466 aa7.81□□□□□ -1.16
BEST1-202ENST00000449131 CC2D2BQ6DHV5 1058 aa7.81□□□□□ -1.16
BEST1-202ENST00000449131 USP17L6PQ6QN14 398 aa7.81□□□□□ -1.16
BEST1-202ENST00000449131 UNC13DQ70J99 1090 aa7.81□□□□□ -1.16
BEST1-202ENST00000449131 TAOK1Q7L7X3 1001 aa7.81□□□□□ -1.16
BEST1-202ENST00000449131 KRT26Q7Z3Y9 468 aa7.81□□□□□ -1.16
BEST1-202ENST00000449131 TMC4Q7Z404 712 aa7.81□□□□□ -1.16
BEST1-202ENST00000449131 ANKRD42Q8N9B4 389 aa7.81□□□□□ -1.16
BEST1-202ENST00000449131 FLAD1Q8NFF5 587 aa7.81□□□□□ -1.16
BEST1-202ENST00000449131 ARHGEF1Q92888 912 aaKnown RBP7.81□□□□□ -1.16
BEST1-202ENST00000449131 NSUN4Q96CB9 384 aaKnown RBP7.81□□□□□ -1.16
BEST1-202ENST00000449131 PCIF1Q9H4Z3 704 aa7.81□□□□□ -1.16
BEST1-202ENST00000449131 AZI2Q9H6S1 392 aa7.81□□□□□ -1.16
BEST1-202ENST00000449131 QTRT2Q9H974 415 aaKnown RBP7.81□□□□□ -1.16
BEST1-202ENST00000449131 TXNDC16Q9P2K2 825 aa7.81□□□□□ -1.16
BEST1-202ENST00000449131 NRXN3Q9Y4C0 1643 aa7.81□□□□□ -1.16
BEST1-202ENST00000449131 ESYT3A0FGR9 886 aa7.81□□□□□ -1.16
BEST1-202ENST00000449131 ORC4O43929 436 aa7.81□□□□□ -1.16
BEST1-202ENST00000449131 TADA3O75528 432 aa7.81□□□□□ -1.16
BEST1-202ENST00000449131 KRT15P19012 456 aa7.81□□□□□ -1.16
BEST1-202ENST00000449131 ALDH3A1P30838 453 aa7.81□□□□□ -1.16
BEST1-202ENST00000449131 LIG4P49917 911 aa7.81□□□□□ -1.16
BEST1-202ENST00000449131 PNMA8AQ86V59 439 aaPredicted RBP7.81□□□□□ -1.16
BEST1-202ENST00000449131 GLG1Q92896 1179 aa7.81□□□□□ -1.16
BEST1-202ENST00000449131 HPS3Q969F9 1004 aa7.81□□□□□ -1.16
BEST1-202ENST00000449131 FEZ2Q9UHY8 353 aaPredicted RBP7.81□□□□□ -1.16
BEST1-202ENST00000449131 PPFIA4O75335 1185 aa7.8□□□□□ -1.16
BEST1-202ENST00000449131 EPHB4P54760 987 aa7.8□□□□□ -1.16
BEST1-202ENST00000449131 VSNL1P62760 191 aa7.8□□□□□ -1.16
BEST1-202ENST00000449131 MAP3K9P80192 1104 aa7.8□□□□□ -1.16
BEST1-202ENST00000449131 MYL7Q01449 175 aa7.8□□□□□ -1.16
BEST1-202ENST00000449131 PPP2R5EQ16537 467 aa7.8□□□□□ -1.16
BEST1-202ENST00000449131 SYDE2Q5VT97 1194 aa7.8□□□□□ -1.16
BEST1-202ENST00000449131 PROCA1Q8NCQ7 364 aaPredicted RBP7.8□□□□□ -1.16
BEST1-202ENST00000449131 COA1Q9GZY4 146 aa7.8□□□□□ -1.16
BEST1-202ENST00000449131 DHX36Q9H2U1 1008 aaKnown RBP7.8□□□□□ -1.16
BEST1-202ENST00000449131 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.8□□□□□ -1.16
BEST1-202ENST00000449131 BARHL2Q9NY43 387 aa7.8□□□□□ -1.16
BEST1-202ENST00000449131 TUBE1Q9UJT0 475 aa7.8□□□□□ -1.16
BEST1-202ENST00000449131 E9PMD0 336 aa7.8□□□□□ -1.16
BEST1-202ENST00000449131 SERPING1P05155 500 aa7.8□□□□□ -1.16
BEST1-202ENST00000449131 GAP43P17677 238 aa7.8□□□□□ -1.16
BEST1-202ENST00000449131 LMNB1P20700 586 aa7.8□□□□□ -1.16
BEST1-202ENST00000449131 POMGNT1Q8WZA1 660 aa7.8□□□□□ -1.16
BEST1-202ENST00000449131 MAGOHBQ96A72 148 aaKnown RBP7.8□□□□□ -1.16
BEST1-202ENST00000449131 C1orf112Q9NSG2 853 aa7.8□□□□□ -1.16
BEST1-202ENST00000449131 GCNT4Q9P109 453 aa7.8□□□□□ -1.16
BEST1-202ENST00000449131 PARP2Q9UGN5 583 aa7.8□□□□□ -1.16
BEST1-202ENST00000449131 TRPC5Q9UL62 973 aaPredicted RBP7.8□□□□□ -1.16
BEST1-202ENST00000449131 FRMD3A2A2Y4 597 aa7.8□□□□□ -1.16
BEST1-202ENST00000449131 RAD17O75943 681 aa7.8□□□□□ -1.16
BEST1-202ENST00000449131 STAMBPO95630 424 aa7.8□□□□□ -1.16
BEST1-202ENST00000449131 TBC1D8O95759 1140 aa7.8□□□□□ -1.16
BEST1-202ENST00000449131 TNFAIP1Q13829 316 aa7.8□□□□□ -1.16
BEST1-202ENST00000449131 CTTNQ14247 550 aaKnown RBP7.8□□□□□ -1.16
BEST1-202ENST00000449131 MCF2L2Q86YR7 1114 aa7.8□□□□□ -1.16
BEST1-202ENST00000449131 NACC1Q96RE7 527 aa7.8□□□□□ -1.16
BEST1-202ENST00000449131 SMC6Q96SB8 1091 aa7.8□□□□□ -1.16
BEST1-202ENST00000449131 PLCB1Q9NQ66 1216 aa7.8□□□□□ -1.16
BEST1-202ENST00000449131 SMARCAL1Q9NZC9 954 aa7.8□□□□□ -1.16
BEST1-202ENST00000449131 ARHGAP23Q9P227 1491 aa7.8□□□□□ -1.16
BEST1-202ENST00000449131 USP17L10C9JJH3 530 aa7.79□□□□□ -1.16
BEST1-202ENST00000449131 ZNF185O15231 689 aa7.79□□□□□ -1.16
BEST1-202ENST00000449131 NT5C2P49902 561 aa7.79□□□□□ -1.16
BEST1-202ENST00000449131 FXR1P51114 621 aaKnown RBP eCLIP7.79□□□□□ -1.16
BEST1-202ENST00000449131 PDE6CP51160 858 aa7.79□□□□□ -1.16
BEST1-202ENST00000449131 ADCY1Q08828 1119 aa7.79□□□□□ -1.16
BEST1-202ENST00000449131 SEPT2Q15019 361 aa7.79□□□□□ -1.16
BEST1-202ENST00000449131 GNPTABQ3T906 1256 aa7.79□□□□□ -1.16
BEST1-202ENST00000449131 C12orf60Q5U649 245 aa7.79□□□□□ -1.16
BEST1-202ENST00000449131 ALKBH5Q6P6C2 394 aaKnown RBP7.79□□□□□ -1.16
BEST1-202ENST00000449131 RAD9BQ6WBX8 426 aa7.79□□□□□ -1.16
BEST1-202ENST00000449131 PPP1R21Q6ZMI0 780 aa7.79□□□□□ -1.16
BEST1-202ENST00000449131 NYAP1Q6ZVC0 841 aa7.79□□□□□ -1.16
BEST1-202ENST00000449131 VSIG1Q86XK7 387 aa7.79□□□□□ -1.16
BEST1-202ENST00000449131 ZNF354CQ86Y25 554 aa7.79□□□□□ -1.16
BEST1-202ENST00000449131 ZNF512BQ96KM6 892 aaPredicted RBP7.79□□□□□ -1.16
BEST1-202ENST00000449131 WDR11Q9BZH6 1224 aa7.79□□□□□ -1.16
BEST1-202ENST00000449131 LRRIQ4A6NIV6 560 aa7.79□□□□□ -1.16
BEST1-202ENST00000449131 PGRMC1O00264 195 aaKnown RBP7.79□□□□□ -1.16
BEST1-202ENST00000449131 ZBTB5O15062 677 aa7.79□□□□□ -1.16
BEST1-202ENST00000449131 TDP2O95551 362 aa7.79□□□□□ -1.16
BEST1-202ENST00000449131 FCER1AP12319 257 aa7.79□□□□□ -1.16
BEST1-202ENST00000449131 ADCY8P40145 1251 aa7.79□□□□□ -1.16
BEST1-202ENST00000449131 STAT2P52630 851 aa7.79□□□□□ -1.16
BEST1-202ENST00000449131 LACTBP83111 547 aaPredicted RBP7.79□□□□□ -1.16
BEST1-202ENST00000449131 DMP1Q13316 513 aaPredicted RBP7.79□□□□□ -1.16
BEST1-202ENST00000449131 CEP128Q6ZU80 1094 aa7.79□□□□□ -1.16
BEST1-202ENST00000449131 PIGOQ8TEQ8 1089 aa7.79□□□□□ -1.16
BEST1-202ENST00000449131 MAIP1Q8WWC4 291 aa7.79□□□□□ -1.16
BEST1-202ENST00000449131 PHF20Q9BVI0 1012 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms