RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 STOX1Q6ZVD7 989 aa20.92■□□□□ 0.94
CHCHD3-203ENST00000448878 IL31RAQ8NI17 732 aa20.92■□□□□ 0.94
CHCHD3-203ENST00000448878 NEK9Q8TD19 979 aa20.92■□□□□ 0.94
CHCHD3-203ENST00000448878 SP7Q8TDD2 431 aaPredicted RBP20.92■□□□□ 0.94
CHCHD3-203ENST00000448878 GPKOWQ92917 476 aaPredicted RBP eCLIP20.92■□□□□ 0.94
CHCHD3-203ENST00000448878 TOP1MTQ969P6 601 aa20.92■□□□□ 0.94
CHCHD3-203ENST00000448878 IFIH1Q9BYX4 1025 aaKnown RBP20.92■□□□□ 0.94
CHCHD3-203ENST00000448878 KRT23Q9C075 422 aa20.92■□□□□ 0.94
CHCHD3-203ENST00000448878 RNPEPQ9H4A4 650 aa20.92■□□□□ 0.94
CHCHD3-203ENST00000448878 CLDND1Q9NY35 253 aa20.92■□□□□ 0.94
CHCHD3-203ENST00000448878 MAP3K20Q9NYL2 800 aaKnown RBP20.92■□□□□ 0.94
CHCHD3-203ENST00000448878 GCOM1H8Y6P7 765 aaPredicted RBP20.91■□□□□ 0.94
CHCHD3-203ENST00000448878 ZBTB5O15062 677 aa20.91■□□□□ 0.94
CHCHD3-203ENST00000448878 POLR2MP0CAP2 368 aa20.91■□□□□ 0.94
CHCHD3-203ENST00000448878 TGFB3P10600 412 aa20.91■□□□□ 0.94
CHCHD3-203ENST00000448878 HOXD8P13378 290 aaPredicted RBP20.91■□□□□ 0.94
CHCHD3-203ENST00000448878 PABPC5Q96DU9 382 aaKnown RBP20.91■□□□□ 0.94
CHCHD3-203ENST00000448878 NSUN3Q9H649 340 aaKnown RBP20.91■□□□□ 0.94
CHCHD3-203ENST00000448878 DCXO43602 365 aa20.9■□□□□ 0.94
CHCHD3-203ENST00000448878 PPP1R11O60927 126 aaPredicted RBP20.9■□□□□ 0.94
CHCHD3-203ENST00000448878 LGALS2P05162 132 aa20.9■□□□□ 0.94
CHCHD3-203ENST00000448878 GNAT1P11488 350 aa20.9■□□□□ 0.94
CHCHD3-203ENST00000448878 OSBPL7Q9BZF2 842 aa20.9■□□□□ 0.94
CHCHD3-203ENST00000448878 BCAS3Q9H6U6 928 aa20.9■□□□□ 0.94
CHCHD3-203ENST00000448878 SETD4Q9NVD3 440 aa20.9■□□□□ 0.94
CHCHD3-203ENST00000448878 MICAL3Q7RTP6 2002 aa20.9■□□□□ 0.94
CHCHD3-203ENST00000448878 CSPG5O95196 566 aa20.89■□□□□ 0.93
CHCHD3-203ENST00000448878 FIBCD1Q8N539 461 aa20.89■□□□□ 0.93
CHCHD3-203ENST00000448878 CNNM2Q9H8M5 875 aa20.89■□□□□ 0.93
CHCHD3-203ENST00000448878 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.88■□□□□ 0.93
CHCHD3-203ENST00000448878 CTNNB1P35222 781 aa20.88■□□□□ 0.93
CHCHD3-203ENST00000448878 MKRN4PQ13434 485 aaPredicted RBP20.88■□□□□ 0.93
CHCHD3-203ENST00000448878 HDAC1Q13547 482 aaPredicted RBP20.88■□□□□ 0.93
CHCHD3-203ENST00000448878 CLUL1Q15846 466 aa20.88■□□□□ 0.93
CHCHD3-203ENST00000448878 GNPTABQ3T906 1256 aa20.88■□□□□ 0.93
CHCHD3-203ENST00000448878 UTP14CQ5TAP6 766 aaKnown RBP20.88■□□□□ 0.93
CHCHD3-203ENST00000448878 CYFIP1Q7L576 1253 aa20.88■□□□□ 0.93
CHCHD3-203ENST00000448878 SAMD3Q8N6K7 520 aa20.88■□□□□ 0.93
CHCHD3-203ENST00000448878 IL17RAQ96F46 866 aa20.88■□□□□ 0.93
CHCHD3-203ENST00000448878 USP26Q9BXU7 913 aa20.88■□□□□ 0.93
CHCHD3-203ENST00000448878 RTEL1Q9NZ71 1219 aa20.88■□□□□ 0.93
CHCHD3-203ENST00000448878 RRP1P56182 461 aaKnown RBP20.87■□□□□ 0.93
CHCHD3-203ENST00000448878 ARHGAP4P98171 946 aa20.87■□□□□ 0.93
CHCHD3-203ENST00000448878 SP4Q02446 784 aa20.87■□□□□ 0.93
CHCHD3-203ENST00000448878 TRAF1Q13077 416 aa20.87■□□□□ 0.93
CHCHD3-203ENST00000448878 APBB2Q92870 758 aa20.87■□□□□ 0.93
CHCHD3-203ENST00000448878 PIGSQ96S52 555 aa20.87■□□□□ 0.93
CHCHD3-203ENST00000448878 MAD2L2Q9UI95 211 aa20.87■□□□□ 0.93
CHCHD3-203ENST00000448878 BRWD1Q9NSI6 2320 aa20.86■□□□□ 0.93
CHCHD3-203ENST00000448878 CAND2O75155 1236 aa20.86■□□□□ 0.93
CHCHD3-203ENST00000448878 GHRHRQ02643 423 aa20.86■□□□□ 0.93
CHCHD3-203ENST00000448878 NEDD9Q14511 834 aa20.86■□□□□ 0.93
CHCHD3-203ENST00000448878 RPAINQ86UA6 219 aa20.86■□□□□ 0.93
CHCHD3-203ENST00000448878 PIBF1Q8WXW3 757 aa20.86■□□□□ 0.93
CHCHD3-203ENST00000448878 DSCC1Q9BVC3 393 aa20.86■□□□□ 0.93
CHCHD3-203ENST00000448878 UPF3BQ9BZI7 483 aaKnown RBP20.86■□□□□ 0.93
CHCHD3-203ENST00000448878 IGFLR1Q9H665 355 aa20.86■□□□□ 0.93
CHCHD3-203ENST00000448878 PRKAG3Q9UGI9 489 aa20.86■□□□□ 0.93
CHCHD3-203ENST00000448878 ZNF215Q9UL58 517 aaPredicted RBP20.86■□□□□ 0.93
CHCHD3-203ENST00000448878 HIP1O00291 1037 aa20.85■□□□□ 0.93
CHCHD3-203ENST00000448878 MRE11P49959 708 aa20.85■□□□□ 0.93
CHCHD3-203ENST00000448878 ZP2Q05996 745 aa20.85■□□□□ 0.93
CHCHD3-203ENST00000448878 TRIM50Q86XT4 487 aa20.85■□□□□ 0.93
CHCHD3-203ENST00000448878 MTMR8Q96EF0 704 aa20.85■□□□□ 0.93
CHCHD3-203ENST00000448878 LAMA4Q16363 1823 aa20.85■□□□□ 0.93
CHCHD3-203ENST00000448878 PALM3A6NDB9 673 aaPredicted RBP20.84■□□□□ 0.93
CHCHD3-203ENST00000448878 NCK2O43639 380 aa20.84■□□□□ 0.93
CHCHD3-203ENST00000448878 TRDNQ13061 729 aa20.84■□□□□ 0.93
CHCHD3-203ENST00000448878 CYB5R4Q7L1T6 521 aa20.84■□□□□ 0.93
CHCHD3-203ENST00000448878 ADHFE1Q8IWW8 467 aa20.84■□□□□ 0.93
CHCHD3-203ENST00000448878 FBXL18Q96ME1 805 aa20.84■□□□□ 0.93
CHCHD3-203ENST00000448878 NLRC5Q86WI3 1866 aa20.84■□□□□ 0.93
CHCHD3-203ENST00000448878 POTEB3A0JP26 581 aa20.83■□□□□ 0.93
CHCHD3-203ENST00000448878 GHRP10912 638 aa20.83■□□□□ 0.93
CHCHD3-203ENST00000448878 HOXC8P31273 242 aa20.83■□□□□ 0.93
CHCHD3-203ENST00000448878 SEC23AQ15436 765 aa20.83■□□□□ 0.93
CHCHD3-203ENST00000448878 POTEBQ6S5H4 581 aa20.83■□□□□ 0.93
CHCHD3-203ENST00000448878 METTL7BQ6UX53 244 aa20.83■□□□□ 0.93
CHCHD3-203ENST00000448878 PLEKHM2Q8IWE5 1019 aa20.83■□□□□ 0.93
CHCHD3-203ENST00000448878 GPR20Q99678 358 aa20.83■□□□□ 0.93
CHCHD3-203ENST00000448878 C11orf84Q9BUA3 381 aaPredicted RBP20.83■□□□□ 0.93
CHCHD3-203ENST00000448878 SUPT16HQ9Y5B9 1047 aaKnown RBP20.83■□□□□ 0.93
CHCHD3-203ENST00000448878 ERICH2A1L162 156 aa20.82■□□□□ 0.92
CHCHD3-203ENST00000448878 GRM6O15303 877 aa20.82■□□□□ 0.92
CHCHD3-203ENST00000448878 FIBPO43427 364 aa20.82■□□□□ 0.92
CHCHD3-203ENST00000448878 RB1P06400 928 aa20.82■□□□□ 0.92
CHCHD3-203ENST00000448878 IRS1P35568 1242 aa20.82■□□□□ 0.92
CHCHD3-203ENST00000448878 BMPR1AP36894 532 aa20.82■□□□□ 0.92
CHCHD3-203ENST00000448878 MRPS9P82933 396 aaKnown RBP20.82■□□□□ 0.92
CHCHD3-203ENST00000448878 NHLH1Q02575 133 aa20.82■□□□□ 0.92
CHCHD3-203ENST00000448878 CHD1LQ86WJ1 897 aa20.82■□□□□ 0.92
CHCHD3-203ENST00000448878 RWDD1Q9H446 243 aaPredicted RBP20.82■□□□□ 0.92
CHCHD3-203ENST00000448878 RWDD3Q9Y3V2 267 aa20.82■□□□□ 0.92
CHCHD3-203ENST00000448878 PNMA6FA0A0J9YX94 578 aa20.81■□□□□ 0.92
CHCHD3-203ENST00000448878 SPATA31C2B4DYI2 1134 aa20.81■□□□□ 0.92
CHCHD3-203ENST00000448878 IFIT3O14879 490 aaKnown RBP20.81■□□□□ 0.92
CHCHD3-203ENST00000448878 STAM2O75886 525 aa20.81■□□□□ 0.92
CHCHD3-203ENST00000448878 LTBRP36941 435 aa20.81■□□□□ 0.92
CHCHD3-203ENST00000448878 HYAL1Q12794 435 aa20.81■□□□□ 0.92
CHCHD3-203ENST00000448878 BTG3Q14201 252 aaPredicted RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms