RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 SLC27A2O14975 620 aa32.62■■■□□ 2.81
CBX4-202ENST00000448310 GTPBP6O43824 516 aaPredicted RBP32.62■■■□□ 2.81
CBX4-202ENST00000448310 MCM5P33992 734 aa32.62■■■□□ 2.81
CBX4-202ENST00000448310 SERINC5Q86VE9 423 aa32.62■■■□□ 2.81
CBX4-202ENST00000448310 SRBD1Q8N5C6 995 aaKnown RBP32.62■■■□□ 2.81
CBX4-202ENST00000448310 CUL5Q93034 780 aa32.62■■■□□ 2.81
CBX4-202ENST00000448310 ESYT1Q9BSJ8 1104 aa32.62■■■□□ 2.81
CBX4-202ENST00000448310 SEC63Q9UGP8 760 aaKnown RBP32.62■■■□□ 2.81
CBX4-202ENST00000448310 MICAL3Q7RTP6 2002 aa32.61■■■□□ 2.81
CBX4-202ENST00000448310 C17orf102A2RUQ5 167 aa32.61■■■□□ 2.81
CBX4-202ENST00000448310 CCDC69A6NI79 296 aa32.61■■■□□ 2.81
CBX4-202ENST00000448310 MEIS2O14770 477 aa32.61■■■□□ 2.81
CBX4-202ENST00000448310 STAM2O75886 525 aa32.61■■■□□ 2.81
CBX4-202ENST00000448310 SMIM10L2AP0DMW4 78 aa32.61■■■□□ 2.81
CBX4-202ENST00000448310 SMIM10L2BP0DMW5 78 aa32.61■■■□□ 2.81
CBX4-202ENST00000448310 THPOP40225 353 aa32.61■■■□□ 2.81
CBX4-202ENST00000448310 NEDD9Q14511 834 aa32.61■■■□□ 2.81
CBX4-202ENST00000448310 SKIV2LQ15477 1246 aaKnown RBP32.61■■■□□ 2.81
CBX4-202ENST00000448310 ATP6V0A1Q93050 837 aa32.61■■■□□ 2.81
CBX4-202ENST00000448310 TSPYL2Q9H2G4 693 aaPredicted RBP32.61■■■□□ 2.81
CBX4-202ENST00000448310 MUC3AQ02505 3323 aa32.6■■■□□ 2.81
CBX4-202ENST00000448310 ABHD14A-ACY1A0A1B0GW23 586 aa32.6■■■□□ 2.81
CBX4-202ENST00000448310 FIBPO43427 364 aa32.6■■■□□ 2.81
CBX4-202ENST00000448310 SMARCA1P28370 1054 aa32.6■■■□□ 2.81
CBX4-202ENST00000448310 METTL7BQ6UX53 244 aa32.6■■■□□ 2.81
CBX4-202ENST00000448310 ADAMTS19Q8TE59 1207 aa32.6■■■□□ 2.81
CBX4-202ENST00000448310 TMEM87BQ96K49 555 aa32.6■■■□□ 2.81
CBX4-202ENST00000448310 GPR20Q99678 358 aa32.6■■■□□ 2.81
CBX4-202ENST00000448310 LZTS2Q9BRK4 669 aa32.6■■■□□ 2.81
CBX4-202ENST00000448310 MTA3Q9BTC8 594 aa32.6■■■□□ 2.81
CBX4-202ENST00000448310 LRRC2Q9BYS8 371 aa32.6■■■□□ 2.81
CBX4-202ENST00000448310 TNFRSF10AO00220 468 aa32.59■■■□□ 2.81
CBX4-202ENST00000448310 TREHO43280 583 aa32.59■■■□□ 2.81
CBX4-202ENST00000448310 LGR5O75473 907 aa32.59■■■□□ 2.81
CBX4-202ENST00000448310 POU3F3P20264 500 aaPredicted RBP32.59■■■□□ 2.81
CBX4-202ENST00000448310 SP4Q02446 784 aa32.59■■■□□ 2.81
CBX4-202ENST00000448310 TFF2Q03403 129 aa32.59■■■□□ 2.81
CBX4-202ENST00000448310 IKBKEQ14164 716 aa32.59■■■□□ 2.81
CBX4-202ENST00000448310 CREB3L3Q68CJ9 461 aa32.59■■■□□ 2.81
CBX4-202ENST00000448310 FAM117BQ6P1L5 589 aa32.59■■■□□ 2.81
CBX4-202ENST00000448310 TRIM50Q86XT4 487 aa32.59■■■□□ 2.81
CBX4-202ENST00000448310 RNPEPQ9H4A4 650 aa32.59■■■□□ 2.81
CBX4-202ENST00000448310 NCOR1O75376 2440 aa32.59■■■□□ 2.81
CBX4-202ENST00000448310 hCG_1642624A0A1W2PR95 340 aa32.58■■■□□ 2.81
CBX4-202ENST00000448310 RSPH10B2B2RC85 870 aa32.58■■■□□ 2.81
CBX4-202ENST00000448310 PIK3CDO00329 1044 aa32.58■■■□□ 2.81
CBX4-202ENST00000448310 RSPH10BP0C881 870 aa32.58■■■□□ 2.81
CBX4-202ENST00000448310 HOXC8P31273 242 aa32.58■■■□□ 2.81
CBX4-202ENST00000448310 GNAQP50148 359 aa32.58■■■□□ 2.81
CBX4-202ENST00000448310 GRB10Q13322 594 aa32.58■■■□□ 2.81
CBX4-202ENST00000448310 PCNX4Q63HM2 1172 aa32.58■■■□□ 2.81
CBX4-202ENST00000448310 KAT6AQ92794 2004 aa32.58■■■□□ 2.81
CBX4-202ENST00000448310 GJB5O95377 273 aa32.57■■■□□ 2.8
CBX4-202ENST00000448310 UTP14CQ5TAP6 766 aaKnown RBP32.57■■■□□ 2.8
CBX4-202ENST00000448310 SKAP1Q86WV1 359 aa32.57■■■□□ 2.8
CBX4-202ENST00000448310 TMTC2Q8N394 836 aa32.57■■■□□ 2.8
CBX4-202ENST00000448310 USP26Q9BXU7 913 aa32.57■■■□□ 2.8
CBX4-202ENST00000448310 ANO2Q9NQ90 1003 aa32.57■■■□□ 2.8
CBX4-202ENST00000448310 NECTIN1Q15223 517 aa32.56■■■□□ 2.8
CBX4-202ENST00000448310 LIN28BQ6ZN17 250 aaKnown RBP eCLIP32.56■■■□□ 2.8
CBX4-202ENST00000448310 CCDC82Q8N4S0 544 aa32.56■■■□□ 2.8
CBX4-202ENST00000448310 IL27Q8NEV9 243 aa32.56■■■□□ 2.8
CBX4-202ENST00000448310 DBF4BQ8NFT6 615 aa32.56■■■□□ 2.8
CBX4-202ENST00000448310 SETD4Q9NVD3 440 aa32.56■■■□□ 2.8
CBX4-202ENST00000448310 MTUS1Q9ULD2 1270 aa32.56■■■□□ 2.8
CBX4-202ENST00000448310 EMSYQ7Z589 1322 aa32.55■■■□□ 2.8
CBX4-202ENST00000448310 LPXNO60711 386 aa32.55■■■□□ 2.8
CBX4-202ENST00000448310 EFCAB14O75071 495 aa32.55■■■□□ 2.8
CBX4-202ENST00000448310 LIFRP42702 1097 aa32.55■■■□□ 2.8
CBX4-202ENST00000448310 GDPD5Q8WTR4 605 aa32.55■■■□□ 2.8
CBX4-202ENST00000448310 RAD9AQ99638 391 aa32.55■■■□□ 2.8
CBX4-202ENST00000448310 SLC12A7Q9Y666 1083 aa32.55■■■□□ 2.8
CBX4-202ENST00000448310 SIP14410 1827 aa32.55■■■□□ 2.8
CBX4-202ENST00000448310 XIRP2A4UGR9 3374 aa32.55■■■□□ 2.8
CBX4-202ENST00000448310 CTSHP09668 335 aa32.54■■■□□ 2.8
CBX4-202ENST00000448310 UBE2SQ16763 222 aa32.54■■■□□ 2.8
CBX4-202ENST00000448310 XRRA1Q6P2D8 792 aa32.54■■■□□ 2.8
CBX4-202ENST00000448310 NLRX1Q86UT6 975 aa32.54■■■□□ 2.8
CBX4-202ENST00000448310 UHRF1Q96T88 793 aaPredicted RBP32.54■■■□□ 2.8
CBX4-202ENST00000448310 OSBPL7Q9BZF2 842 aa32.54■■■□□ 2.8
CBX4-202ENST00000448310 PSTPIP2Q9H939 334 aa32.54■■■□□ 2.8
CBX4-202ENST00000448310 CALM1P0DP23 149 aa32.53■■■□□ 2.8
CBX4-202ENST00000448310 CALM2P0DP24 149 aa32.53■■■□□ 2.8
CBX4-202ENST00000448310 CALM3P0DP25 149 aa32.53■■■□□ 2.8
CBX4-202ENST00000448310 SENP7Q9BQF6 1050 aa32.53■■■□□ 2.8
CBX4-202ENST00000448310 MICU3Q86XE3 530 aa32.52■■■□□ 2.8
CBX4-202ENST00000448310 ZNF215Q9UL58 517 aaPredicted RBP32.52■■■□□ 2.8
CBX4-202ENST00000448310 LINC01553A4QN01 128 aa32.51■■■□□ 2.79
CBX4-202ENST00000448310 ATP9AO75110 1047 aa32.51■■■□□ 2.79
CBX4-202ENST00000448310 KCNQ1P51787 676 aa32.51■■■□□ 2.79
CBX4-202ENST00000448310 MKRN4PQ13434 485 aaPredicted RBP32.51■■■□□ 2.79
CBX4-202ENST00000448310 PLEKHG4Q58EX7 1191 aa32.51■■■□□ 2.79
CBX4-202ENST00000448310 TMTC3Q6ZXV5 915 aa32.51■■■□□ 2.79
CBX4-202ENST00000448310 MYOCDQ8IZQ8 938 aa32.51■■■□□ 2.79
CBX4-202ENST00000448310 NECAB3Q96P71 396 aaPredicted RBP32.51■■■□□ 2.79
CBX4-202ENST00000448310 BMP1P13497 986 aa32.5■■■□□ 2.79
CBX4-202ENST00000448310 ARHGAP4P98171 946 aa32.5■■■□□ 2.79
CBX4-202ENST00000448310 FANCBQ8NB91 859 aa32.5■■■□□ 2.79
CBX4-202ENST00000448310 PKD2L1Q9P0L9 805 aa32.5■■■□□ 2.79
CBX4-202ENST00000448310 AMHP03971 560 aa32.49■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms