RNA–Protein interactions for RNA: ENST00000445654.2

SHANK2-209, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 522 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-209ENST00000445654 EFHBQ8N7U6 833 aa16.28■□□□□ 0.2
SHANK2-209ENST00000445654 SMRP1Q8NCR6 262 aa16.28■□□□□ 0.2
SHANK2-209ENST00000445654 SEC62Q99442 399 aaKnown RBP16.28■□□□□ 0.2
SHANK2-209ENST00000445654 PHF7Q9BWX1 381 aaPredicted RBP16.28■□□□□ 0.2
SHANK2-209ENST00000445654 MAP3K20Q9NYL2 800 aaKnown RBP16.28■□□□□ 0.2
SHANK2-209ENST00000445654 CFAP54Q96N23 3096 aa16.27■□□□□ 0.2
SHANK2-209ENST00000445654 MYH7BA7E2Y1 1941 aa16.27■□□□□ 0.2
SHANK2-209ENST00000445654 CCDC171Q6TFL3 1326 aa16.27■□□□□ 0.2
SHANK2-209ENST00000445654 H3BRB1 525 aa16.27■□□□□ 0.2
SHANK2-209ENST00000445654 HOXC8P31273 242 aa16.27■□□□□ 0.2
SHANK2-209ENST00000445654 NT5C2P49902 561 aa16.27■□□□□ 0.2
SHANK2-209ENST00000445654 ALX1Q15699 326 aa16.27■□□□□ 0.2
SHANK2-209ENST00000445654 CELF3Q5SZQ8 465 aaKnown RBP16.27■□□□□ 0.2
SHANK2-209ENST00000445654 TUT1Q9H6E5 874 aaKnown RBP16.27■□□□□ 0.2
SHANK2-209ENST00000445654 PXMP2Q9NR77 195 aa16.27■□□□□ 0.2
SHANK2-209ENST00000445654 FAM86C1Q9NVL1 165 aa16.27■□□□□ 0.2
SHANK2-209ENST00000445654 ATG2AQ2TAZ0 1938 aa16.27■□□□□ 0.19
SHANK2-209ENST00000445654 C5orf42Q9H799 3197 aa16.26■□□□□ 0.19
SHANK2-209ENST00000445654 CTSHP09668 335 aa16.26■□□□□ 0.19
SHANK2-209ENST00000445654 EIF2AK2P19525 551 aaKnown RBP16.26■□□□□ 0.19
SHANK2-209ENST00000445654 BTG3Q14201 252 aaPredicted RBP16.26■□□□□ 0.19
SHANK2-209ENST00000445654 CDC37Q16543 378 aaPredicted RBP16.26■□□□□ 0.19
SHANK2-209ENST00000445654 RRP12Q5JTH9 1297 aaKnown RBP16.26■□□□□ 0.19
SHANK2-209ENST00000445654 FAM26DQ5JW98 314 aa16.26■□□□□ 0.19
SHANK2-209ENST00000445654 MLXIPQ9HAP2 919 aa16.26■□□□□ 0.19
SHANK2-209ENST00000445654 ZDBF2Q9HCK1 2354 aa16.26■□□□□ 0.19
SHANK2-209ENST00000445654 LINC01565O15544 149 aa16.25■□□□□ 0.19
SHANK2-209ENST00000445654 GGPS1O95749 300 aa16.25■□□□□ 0.19
SHANK2-209ENST00000445654 SMIM10L2AP0DMW4 78 aa16.25■□□□□ 0.19
SHANK2-209ENST00000445654 SMIM10L2BP0DMW5 78 aa16.25■□□□□ 0.19
SHANK2-209ENST00000445654 ATF7P17544 494 aaPredicted RBP16.25■□□□□ 0.19
SHANK2-209ENST00000445654 ICAM3P32942 547 aa16.25■□□□□ 0.19
SHANK2-209ENST00000445654 RRP1P56182 461 aaKnown RBP16.25■□□□□ 0.19
SHANK2-209ENST00000445654 HSDL1Q3SXM5 330 aa16.25■□□□□ 0.19
SHANK2-209ENST00000445654 CCDC178Q5BJE1 867 aa16.25■□□□□ 0.19
SHANK2-209ENST00000445654 SAMD3Q8N6K7 520 aa16.25■□□□□ 0.19
SHANK2-209ENST00000445654 C16orf70Q9BSU1 422 aa16.25■□□□□ 0.19
SHANK2-209ENST00000445654 USP26Q9BXU7 913 aa16.25■□□□□ 0.19
SHANK2-209ENST00000445654 INCENPQ9NQS7 918 aa16.25■□□□□ 0.19
SHANK2-209ENST00000445654 COL20A1Q9P218 1284 aa16.25■□□□□ 0.19
SHANK2-209ENST00000445654 TREHO43280 583 aa16.24■□□□□ 0.19
SHANK2-209ENST00000445654 SRGAP2BP0DMP2 458 aa16.24■□□□□ 0.19
SHANK2-209ENST00000445654 HIC1Q14526 733 aa16.24■□□□□ 0.19
SHANK2-209ENST00000445654 RSPH3Q86UC2 560 aa16.24■□□□□ 0.19
SHANK2-209ENST00000445654 ASIC4Q96FT7 647 aa16.24■□□□□ 0.19
SHANK2-209ENST00000445654 RNPEPQ9H4A4 650 aa16.24■□□□□ 0.19
SHANK2-209ENST00000445654 ZNF215Q9UL58 517 aaPredicted RBP16.24■□□□□ 0.19
SHANK2-209ENST00000445654 PLAGL2Q9UPG8 496 aa16.24■□□□□ 0.19
SHANK2-209ENST00000445654 USP15Q9Y4E8 981 aaPredicted RBP16.24■□□□□ 0.19
SHANK2-209ENST00000445654 NOP56O00567 594 aaKnown RBP16.23■□□□□ 0.19
SHANK2-209ENST00000445654 GALR2O43603 387 aaPredicted RBP16.23■□□□□ 0.19
SHANK2-209ENST00000445654 LINC00271P0C7V0 271 aa16.23■□□□□ 0.19
SHANK2-209ENST00000445654 VCPP55072 806 aaKnown RBP16.23■□□□□ 0.19
SHANK2-209ENST00000445654 TRAF1Q13077 416 aa16.23■□□□□ 0.19
SHANK2-209ENST00000445654 PTPN21Q16825 1174 aa16.23■□□□□ 0.19
SHANK2-209ENST00000445654 ASPRV1Q53RT3 343 aa16.23■□□□□ 0.19
SHANK2-209ENST00000445654 MCTP2Q6DN12 878 aa16.23■□□□□ 0.19
SHANK2-209ENST00000445654 CMTR2Q8IYT2 770 aaKnown RBP16.23■□□□□ 0.19
SHANK2-209ENST00000445654 TBC1D5Q92609 795 aa16.23■□□□□ 0.19
SHANK2-209ENST00000445654 RC3H2Q9HBD1 1191 aaKnown RBP16.23■□□□□ 0.19
SHANK2-209ENST00000445654 ZFHX2Q9C0A1 2572 aaPredicted RBP16.23■□□□□ 0.19
SHANK2-209ENST00000445654 H0Y858 1186 aa16.22■□□□□ 0.19
SHANK2-209ENST00000445654 KDM4AO75164 1064 aa16.22■□□□□ 0.19
SHANK2-209ENST00000445654 CFBP00751 764 aa16.22■□□□□ 0.19
SHANK2-209ENST00000445654 LGALS2P05162 132 aa16.22■□□□□ 0.19
SHANK2-209ENST00000445654 RPLP2P05387 115 aaKnown RBP16.22■□□□□ 0.19
SHANK2-209ENST00000445654 MYCLP12524 364 aaPredicted RBP16.22■□□□□ 0.19
SHANK2-209ENST00000445654 GTF2F1P35269 517 aaKnown RBP eCLIP16.22■□□□□ 0.197e-7■■■■■ 30.9
SHANK2-209ENST00000445654 NBL1P41271 181 aa16.22■□□□□ 0.19
SHANK2-209ENST00000445654 GHRHRQ02643 423 aa16.22■□□□□ 0.19
SHANK2-209ENST00000445654 TSHZ3Q63HK5 1081 aa16.22■□□□□ 0.19
SHANK2-209ENST00000445654 ZBTB33Q86T24 672 aa16.22■□□□□ 0.19
SHANK2-209ENST00000445654 DGKHQ86XP1 1220 aa16.22■□□□□ 0.19
SHANK2-209ENST00000445654 MIER1Q8N108 512 aa16.22■□□□□ 0.19
SHANK2-209ENST00000445654 ZNF689Q96CS4 500 aaPredicted RBP16.22■□□□□ 0.19
SHANK2-209ENST00000445654 RPGRIP1Q96KN7 1286 aa16.22■□□□□ 0.19
SHANK2-209ENST00000445654 CDCA3Q99618 268 aaPredicted RBP16.22■□□□□ 0.19
SHANK2-209ENST00000445654 PDCD2LQ9BRP1 358 aa16.22■□□□□ 0.19
SHANK2-209ENST00000445654 UBA5Q9GZZ9 404 aa16.22■□□□□ 0.19
SHANK2-209ENST00000445654 RNF41Q9H4P4 317 aaPredicted RBP16.22■□□□□ 0.19
SHANK2-209ENST00000445654 ALG13Q9NP73 1137 aaKnown RBP16.22■□□□□ 0.19
SHANK2-209ENST00000445654 TLR9Q9NR96 1032 aa16.22■□□□□ 0.19
SHANK2-209ENST00000445654 CLEC1BQ9P126 229 aa16.22■□□□□ 0.19
SHANK2-209ENST00000445654 MYO7AQ13402 2215 aa16.22■□□□□ 0.19
SHANK2-209ENST00000445654 ZMYM6O95789 1325 aa16.21■□□□□ 0.19
SHANK2-209ENST00000445654 PLXNA3P51805 1871 aa16.21■□□□□ 0.19
SHANK2-209ENST00000445654 PRR23AA6NEV1 266 aa16.21■□□□□ 0.19
SHANK2-209ENST00000445654 FOXP2O15409 715 aa16.21■□□□□ 0.19
SHANK2-209ENST00000445654 DHX16O60231 1041 aaKnown RBP16.21■□□□□ 0.19
SHANK2-209ENST00000445654 DGKIO75912 1065 aa16.21■□□□□ 0.19
SHANK2-209ENST00000445654 UBA1P22314 1058 aaKnown RBP16.21■□□□□ 0.19
SHANK2-209ENST00000445654 CCND2P30279 289 aa16.21■□□□□ 0.19
SHANK2-209ENST00000445654 ID4P47928 161 aa16.21■□□□□ 0.19
SHANK2-209ENST00000445654 NRIP1P48552 1158 aa16.21■□□□□ 0.19
SHANK2-209ENST00000445654 HSD17B4P51659 736 aa16.21■□□□□ 0.19
SHANK2-209ENST00000445654 UBE3AQ05086 875 aa16.21■□□□□ 0.19
SHANK2-209ENST00000445654 GNPTABQ3T906 1256 aa16.21■□□□□ 0.19
SHANK2-209ENST00000445654 TAF2Q6P1X5 1199 aa16.21■□□□□ 0.19
SHANK2-209ENST00000445654 MFSD6Q6ZSS7 791 aa16.21■□□□□ 0.19
SHANK2-209ENST00000445654 FAM43BQ6ZT52 329 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms