RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 TBC1D31Q96DN5 1066 aa8.71□□□□□ -1.01
RIF1-205ENST00000444746 PARD6BQ9BYG5 372 aa8.71□□□□□ -1.01
RIF1-205ENST00000444746 RASSF4Q9H2L5 321 aa8.71□□□□□ -1.01
RIF1-205ENST00000444746 TFR2Q9UP52 801 aa8.71□□□□□ -1.01
RIF1-205ENST00000444746 MAPK4P31152 587 aa8.71□□□□□ -1.02
RIF1-205ENST00000444746 NFIXQ14938 502 aa8.71□□□□□ -1.02
RIF1-205ENST00000444746 LARSQ9P2J5 1176 aaKnown RBP8.71□□□□□ -1.02
RIF1-205ENST00000444746 ZHX2Q9Y6X8 837 aa8.71□□□□□ -1.02
RIF1-205ENST00000444746 COL15A1P39059 1388 aa8.71□□□□□ -1.02
RIF1-205ENST00000444746 GOLGA8MH3BSY2 632 aa8.71□□□□□ -1.02
RIF1-205ENST00000444746 MYBP10242 640 aa8.71□□□□□ -1.02
RIF1-205ENST00000444746 ATF2P15336 505 aa8.71□□□□□ -1.02
RIF1-205ENST00000444746 TNFAIP1Q13829 316 aa8.71□□□□□ -1.02
RIF1-205ENST00000444746 TMED2Q15363 201 aa8.71□□□□□ -1.02
RIF1-205ENST00000444746 STMN2Q93045 179 aa8.71□□□□□ -1.02
RIF1-205ENST00000444746 SAAL1Q96ER3 474 aa8.71□□□□□ -1.02
RIF1-205ENST00000444746 KIF2CQ99661 725 aa8.71□□□□□ -1.02
RIF1-205ENST00000444746 EIF4E1BA6NMX2 242 aaKnown RBP8.71□□□□□ -1.02
RIF1-205ENST00000444746 BAG2O95816 211 aa8.71□□□□□ -1.02
RIF1-205ENST00000444746 GAS8O95995 478 aa8.71□□□□□ -1.02
RIF1-205ENST00000444746 KRT1P04264 644 aa8.71□□□□□ -1.02
RIF1-205ENST00000444746 TXNRD1Q16881 649 aa8.71□□□□□ -1.02
RIF1-205ENST00000444746 DDX12PQ92771 950 aa8.71□□□□□ -1.02
RIF1-205ENST00000444746 NT5C1BQ96P26 610 aa8.71□□□□□ -1.02
RIF1-205ENST00000444746 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.71□□□□□ -1.021e-7■■■■□ 20.8
RIF1-205ENST00000444746 ABCA8O94911 1581 aa8.71□□□□□ -1.02
RIF1-205ENST00000444746 GNA14O95837 355 aa8.71□□□□□ -1.02
RIF1-205ENST00000444746 GCLMP48507 274 aa8.71□□□□□ -1.02
RIF1-205ENST00000444746 NEDD9Q14511 834 aa8.71□□□□□ -1.02
RIF1-205ENST00000444746 MLXIPLQ9NP71 852 aa8.71□□□□□ -1.02
RIF1-205ENST00000444746 ESYT3A0FGR9 886 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 CIB2O75838 187 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 SHC4Q6S5L8 630 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 VSTM4Q8IW00 320 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 KDM5DQ9BY66 1539 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 PCK1P35558 622 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 SLC12A1Q13621 1099 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 ZSCAN26Q16670 478 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 CCDC170Q8IYT3 715 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 RMDN2Q96LZ7 410 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 ACCSQ96QU6 501 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 ABCB6Q9NP58 842 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 PI4KBQ9UBF8 816 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 CHORDC1Q9UHD1 332 aaPredicted RBP8.7□□□□□ -1.02
RIF1-205ENST00000444746 BBOX1O75936 387 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 MFAP3P55082 362 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 NFX1Q12986 1120 aaKnown RBP8.7□□□□□ -1.02
RIF1-205ENST00000444746 DCAF15Q66K64 600 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 SDCCAG8Q86SQ7 713 aaPredicted RBP8.7□□□□□ -1.02
RIF1-205ENST00000444746 SRBD1Q8N5C6 995 aaKnown RBP8.7□□□□□ -1.02
RIF1-205ENST00000444746 RETREG2Q8NC44 543 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 FAM193BQ96PV7 902 aaPredicted RBP8.7□□□□□ -1.02
RIF1-205ENST00000444746 SMARCAL1Q9NZC9 954 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 CD2APQ9Y5K6 639 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 ARHGAP42A6NI28 874 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 CCDC93Q567U6 631 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 FAM133BQ5BKY9 247 aaKnown RBP8.7□□□□□ -1.02
RIF1-205ENST00000444746 ADGRF4Q8IZF3 695 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 LINC00116Q8NCU8 138 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 BCAS4Q8TDM0 211 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 MCUR1Q96AQ8 359 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 HEXIM2Q96MH2 286 aaKnown RBP8.7□□□□□ -1.02
RIF1-205ENST00000444746 GSDMAQ96QA5 445 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 CALN1Q9BXU9 219 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 ERVV-1B6SEH8 477 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 CCND2P30279 289 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 CERS3Q8IU89 383 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 PPM1EQ8WY54 764 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 WRNIP1Q96S55 665 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 IRX2Q9BZI1 471 aaPredicted RBP8.7□□□□□ -1.02
RIF1-205ENST00000444746 PNMA6FA0A0J9YX94 578 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 STK10O94804 968 aaKnown RBP8.7□□□□□ -1.02
RIF1-205ENST00000444746 CCDC14Q49A88 953 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 DALRD3Q5D0E6 543 aaKnown RBP8.7□□□□□ -1.02
RIF1-205ENST00000444746 SLC27A3Q5K4L6 730 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 DDX23Q9BUQ8 820 aaKnown RBP8.7□□□□□ -1.02
RIF1-205ENST00000444746 EFCC1Q9HA90 598 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 KLHL11Q9NVR0 708 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 NUB1Q9Y5A7 615 aa8.7□□□□□ -1.02
RIF1-205ENST00000444746 ACTN1P12814 892 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 ZNF18P17022 549 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 RESP18Q5W5W9 173 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 MIS18BP1Q6P0N0 1132 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 PDXDC2PQ6P474 469 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 SRGAP1Q7Z6B7 1085 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 ANAPC4Q9UJX5 808 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 EFCAB8A8MWE9 144 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 SPP2Q13103 211 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 ADPGKQ9BRR6 497 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 FAM213AQ9BRX8 229 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 CAPS2Q9BXY5 557 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 NDST4Q9H3R1 872 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 GCC2Q8IWJ2 1684 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 TSPOAP1O95153 1857 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 PPP1R12AO14974 1030 aaPredicted RBP8.69□□□□□ -1.02
RIF1-205ENST00000444746 BASP1P80723 227 aaKnown RBP8.69□□□□□ -1.02
RIF1-205ENST00000444746 CCDC51Q96ER9 411 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 PTCH1Q13635 1447 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 TRIM49P0CI25 452 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 TRIM49CP0CI26 452 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms