RNA–Protein interactions for RNA: ENST00000440925.1

PLOD3-205, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-205ENST00000440925 CYFIP1Q7L576 1253 aa16.85■□□□□ 0.29
PLOD3-205ENST00000440925 SCFD2Q8WU76 684 aa16.85■□□□□ 0.29
PLOD3-205ENST00000440925 FAM20AQ96MK3 541 aa16.85■□□□□ 0.29
PLOD3-205ENST00000440925 NAP1L4Q99733 375 aaKnown RBP16.85■□□□□ 0.29
PLOD3-205ENST00000440925 ZNF577Q9BSK1 485 aa16.85■□□□□ 0.29
PLOD3-205ENST00000440925 UNC93B1Q9H1C4 597 aa16.85■□□□□ 0.29
PLOD3-205ENST00000440925 USP49Q70CQ1 688 aa16.84■□□□□ 0.29
PLOD3-205ENST00000440925 MPHOSPH6Q99547 160 aaKnown RBP16.84■□□□□ 0.29
PLOD3-205ENST00000440925 RIT2Q99578 217 aa16.84■□□□□ 0.29
PLOD3-205ENST00000440925 UNC45AQ9H3U1 944 aa16.84■□□□□ 0.29
PLOD3-205ENST00000440925 FAM184BQ9ULE4 1060 aa16.84■□□□□ 0.29
PLOD3-205ENST00000440925 PCDHA7Q9UN72 937 aa16.84■□□□□ 0.29
PLOD3-205ENST00000440925 MYH15Q9Y2K3 1946 aa16.84■□□□□ 0.29
PLOD3-205ENST00000440925 MYADML2A6NDP7 307 aa16.83■□□□□ 0.28
PLOD3-205ENST00000440925 SEPT4O43236 478 aa16.83■□□□□ 0.28
PLOD3-205ENST00000440925 NFASCO94856 1347 aa16.83■□□□□ 0.28
PLOD3-205ENST00000440925 FARP2O94887 1054 aaPredicted RBP16.83■□□□□ 0.28
PLOD3-205ENST00000440925 ATG7O95352 703 aa16.83■□□□□ 0.28
PLOD3-205ENST00000440925 YEATS4O95619 227 aa16.83■□□□□ 0.28
PLOD3-205ENST00000440925 GGPS1O95749 300 aa16.83■□□□□ 0.28
PLOD3-205ENST00000440925 OR52Z1P0C646 297 aa16.83■□□□□ 0.28
PLOD3-205ENST00000440925 CDC25AP30304 524 aa16.83■□□□□ 0.28
PLOD3-205ENST00000440925 PRPHP41219 470 aa16.83■□□□□ 0.28
PLOD3-205ENST00000440925 TECP42680 631 aa16.83■□□□□ 0.28
PLOD3-205ENST00000440925 NKX3-2P78367 333 aa16.83■□□□□ 0.28
PLOD3-205ENST00000440925 TCHHQ07283 1943 aa16.83■□□□□ 0.28
PLOD3-205ENST00000440925 TTLL4Q14679 1199 aa16.83■□□□□ 0.28
PLOD3-205ENST00000440925 HSDL1Q3SXM5 330 aa16.83■□□□□ 0.28
PLOD3-205ENST00000440925 GNPTABQ3T906 1256 aa16.83■□□□□ 0.28
PLOD3-205ENST00000440925 ARMC5Q96C12 935 aa16.83■□□□□ 0.28
PLOD3-205ENST00000440925 PCYT2Q99447 389 aa16.83■□□□□ 0.28
PLOD3-205ENST00000440925 MMTAG2Q9BU76 263 aaKnown RBP16.83■□□□□ 0.28
PLOD3-205ENST00000440925 MCOLN1Q9GZU1 580 aa16.83■□□□□ 0.28
PLOD3-205ENST00000440925 TTC12Q9H892 705 aaPredicted RBP16.83■□□□□ 0.28
PLOD3-205ENST00000440925 SRPRBQ9Y5M8 271 aaKnown RBP16.83■□□□□ 0.28
PLOD3-205ENST00000440925 PP2D1A8MPX8 630 aa16.82■□□□□ 0.28
PLOD3-205ENST00000440925 DDX39AO00148 427 aaKnown RBP16.82■□□□□ 0.28
PLOD3-205ENST00000440925 SPTLC2O15270 562 aa16.82■□□□□ 0.28
PLOD3-205ENST00000440925 DYNC1LI2O43237 492 aaPredicted RBP16.82■□□□□ 0.28
PLOD3-205ENST00000440925 SETQ01105 290 aaPredicted RBP16.82■□□□□ 0.28
PLOD3-205ENST00000440925 PPP2R5CQ13362 524 aa16.82■□□□□ 0.28
PLOD3-205ENST00000440925 PKN2Q16513 984 aaKnown RBP16.82■□□□□ 0.28
PLOD3-205ENST00000440925 ECM1Q16610 540 aa16.82■□□□□ 0.28
PLOD3-205ENST00000440925 ARL6IP4Q66PJ3 421 aaKnown RBP16.82■□□□□ 0.28
PLOD3-205ENST00000440925 CCSAPQ6IQ19 270 aaPredicted RBP16.82■□□□□ 0.28
PLOD3-205ENST00000440925 KCNV1Q6PIU1 500 aa16.82■□□□□ 0.28
PLOD3-205ENST00000440925 ABHD15Q6UXT9 468 aa16.82■□□□□ 0.28
PLOD3-205ENST00000440925 IGSF22Q8N9C0 903 aa16.82■□□□□ 0.28
PLOD3-205ENST00000440925 EMID1Q96A84 441 aaPredicted RBP16.82■□□□□ 0.28
PLOD3-205ENST00000440925 ZNF333Q96JL9 665 aa16.82■□□□□ 0.28
PLOD3-205ENST00000440925 TBC1D22BQ9NU19 505 aa16.82■□□□□ 0.28
PLOD3-205ENST00000440925 CFAP45Q9UL16 551 aa16.82■□□□□ 0.28
PLOD3-205ENST00000440925 IGKV6D-21A0A0A0MT36 114 aa16.81■□□□□ 0.28
PLOD3-205ENST00000440925 PPP6R2O75170 966 aa16.81■□□□□ 0.28
PLOD3-205ENST00000440925 GADD45BO75293 160 aaPredicted RBP16.81■□□□□ 0.28
PLOD3-205ENST00000440925 STBD1O95210 358 aa16.81■□□□□ 0.28
PLOD3-205ENST00000440925 CCL5P13501 91 aa16.81■□□□□ 0.28
PLOD3-205ENST00000440925 AKR1A1P14550 325 aa16.81■□□□□ 0.28
PLOD3-205ENST00000440925 FXR2P51116 673 aaKnown RBP eCLIP16.81■□□□□ 0.28
PLOD3-205ENST00000440925 PDIA5Q14554 519 aa16.81■□□□□ 0.28
PLOD3-205ENST00000440925 SPECC1Q5M775 1068 aa16.81■□□□□ 0.28
PLOD3-205ENST00000440925 LRCH2Q5VUJ6 765 aa16.81■□□□□ 0.28
PLOD3-205ENST00000440925 LRRC15Q8TF66 581 aa16.81■□□□□ 0.28
PLOD3-205ENST00000440925 CDHR1Q96JP9 859 aa16.81■□□□□ 0.28
PLOD3-205ENST00000440925 GPR20Q99678 358 aa16.81■□□□□ 0.28
PLOD3-205ENST00000440925 CSRNP2Q9H175 543 aa16.81■□□□□ 0.28
PLOD3-205ENST00000440925 UPF3AQ9H1J1 476 aaKnown RBP16.81■□□□□ 0.28
PLOD3-205ENST00000440925 PAK6Q9NQU5 681 aaPredicted RBP16.81■□□□□ 0.28
PLOD3-205ENST00000440925 PCDHA12Q9UN75 941 aa16.81■□□□□ 0.28
PLOD3-205ENST00000440925 Q9Y3F1 56 aa16.81■□□□□ 0.28
PLOD3-205ENST00000440925 DOCK5Q9H7D0 1870 aa16.81■□□□□ 0.28
PLOD3-205ENST00000440925 A0A087WWV3 80 aa16.8■□□□□ 0.28
PLOD3-205ENST00000440925 VWA3AA6NCI4 1184 aa16.8■□□□□ 0.28
PLOD3-205ENST00000440925 POTEMA6NI47 508 aa16.8■□□□□ 0.28
PLOD3-205ENST00000440925 A6NJR5 290 aa16.8■□□□□ 0.28
PLOD3-205ENST00000440925 LAD1O00515 517 aa16.8■□□□□ 0.28
PLOD3-205ENST00000440925 ADAMTS4O75173 837 aa16.8■□□□□ 0.28
PLOD3-205ENST00000440925 DUSP11O75319 330 aaKnown RBP16.8■□□□□ 0.28
PLOD3-205ENST00000440925 MYCP01106 439 aaPredicted RBP16.8■□□□□ 0.28
PLOD3-205ENST00000440925 SPATA31C1P0DKV0 1188 aa16.8■□□□□ 0.28
PLOD3-205ENST00000440925 ATP4AP20648 1035 aa16.8■□□□□ 0.28
PLOD3-205ENST00000440925 CNGA1P29973 690 aa16.8■□□□□ 0.28
PLOD3-205ENST00000440925 GJA9P57773 515 aa16.8■□□□□ 0.28
PLOD3-205ENST00000440925 ACTR2P61160 394 aa16.8■□□□□ 0.28
PLOD3-205ENST00000440925 KRT85P78386 507 aa16.8■□□□□ 0.28
PLOD3-205ENST00000440925 NEDD9Q14511 834 aa16.8■□□□□ 0.28
PLOD3-205ENST00000440925 STK38Q15208 465 aa16.8■□□□□ 0.28
PLOD3-205ENST00000440925 SLC9C1Q4G0N8 1177 aa16.8■□□□□ 0.28
PLOD3-205ENST00000440925 SHC4Q6S5L8 630 aa16.8■□□□□ 0.28
PLOD3-205ENST00000440925 METTL7BQ6UX53 244 aa16.8■□□□□ 0.28
PLOD3-205ENST00000440925 DHX37Q8IY37 1157 aaKnown RBP16.8■□□□□ 0.28
PLOD3-205ENST00000440925 SLFN12Q8IYM2 578 aa16.8■□□□□ 0.28
PLOD3-205ENST00000440925 KLHDC9Q8NEP7 349 aa16.8■□□□□ 0.28
PLOD3-205ENST00000440925 AFG1LQ8WV93 481 aa16.8■□□□□ 0.28
PLOD3-205ENST00000440925 EPSTI1Q96J88 318 aa16.8■□□□□ 0.28
PLOD3-205ENST00000440925 HSD17B14Q9BPX1 270 aa16.8■□□□□ 0.28
PLOD3-205ENST00000440925 HMX1Q9NP08 348 aaPredicted RBP16.8■□□□□ 0.28
PLOD3-205ENST00000440925 WRAP73Q9P2S5 460 aaPredicted RBP16.8■□□□□ 0.28
PLOD3-205ENST00000440925 SLC9A2Q9UBY0 812 aa16.8■□□□□ 0.28
PLOD3-205ENST00000440925 DDX20Q9UHI6 824 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms