RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 GOLPH3Q9H4A6 298 aa14.97□□□□□ -0.01
HERPUD1-204ENST00000439977 RBM12Q9NTZ6 932 aaKnown RBP14.97□□□□□ -0.01
HERPUD1-204ENST00000439977 DDX60LQ5H9U9 1706 aaKnown RBP14.97□□□□□ -0.01
HERPUD1-204ENST00000439977 TARSL2A2RTX5 802 aaKnown RBP14.97□□□□□ -0.01
HERPUD1-204ENST00000439977 ACTN1P12814 892 aa14.97□□□□□ -0.01
HERPUD1-204ENST00000439977 SMARCA1P28370 1054 aa14.97□□□□□ -0.01
HERPUD1-204ENST00000439977 SHMT1P34896 483 aa14.97□□□□□ -0.01
HERPUD1-204ENST00000439977 CRY2Q49AN0 593 aa14.97□□□□□ -0.01
HERPUD1-204ENST00000439977 FAM133AQ8N9E0 248 aa14.97□□□□□ -0.01
HERPUD1-204ENST00000439977 AFAP1L1Q8TED9 768 aa14.97□□□□□ -0.01
HERPUD1-204ENST00000439977 RPGRIP1Q96KN7 1286 aa14.97□□□□□ -0.01
HERPUD1-204ENST00000439977 GOLGA6BA6NDN3 693 aa14.96□□□□□ -0.01
HERPUD1-204ENST00000439977 PLA2G4BP0C869 781 aa14.96□□□□□ -0.01
HERPUD1-204ENST00000439977 NT5C2P49902 561 aa14.96□□□□□ -0.01
HERPUD1-204ENST00000439977 CASP5P51878 434 aa14.96□□□□□ -0.01
HERPUD1-204ENST00000439977 MRPL12P52815 198 aaKnown RBP14.96□□□□□ -0.01
HERPUD1-204ENST00000439977 PSMC6P62333 389 aa14.96□□□□□ -0.01
HERPUD1-204ENST00000439977 EHHADHQ08426 723 aa14.96□□□□□ -0.01
HERPUD1-204ENST00000439977 LRRC31Q6UY01 552 aa14.96□□□□□ -0.01
HERPUD1-204ENST00000439977 C15orf52Q6ZUT6 534 aaKnown RBP14.96□□□□□ -0.01
HERPUD1-204ENST00000439977 BMP2KQ9NSY1 1161 aaPredicted RBP14.96□□□□□ -0.01
HERPUD1-204ENST00000439977 PCDHA1Q9Y5I3 950 aa14.96□□□□□ -0.01
HERPUD1-204ENST00000439977 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.96□□□□□ -0.01
HERPUD1-204ENST00000439977 TULP2O00295 520 aa14.96□□□□□ -0.01
HERPUD1-204ENST00000439977 ZBTB5O15062 677 aa14.96□□□□□ -0.01
HERPUD1-204ENST00000439977 PRPF6O94906 941 aaKnown RBP14.96□□□□□ -0.01
HERPUD1-204ENST00000439977 SNHG28P0DPA3 235 aa14.96□□□□□ -0.01
HERPUD1-204ENST00000439977 MCM3P25205 808 aa14.96□□□□□ -0.01
HERPUD1-204ENST00000439977 NOVP48745 357 aa14.96□□□□□ -0.01
HERPUD1-204ENST00000439977 USH1GQ495M9 461 aa14.96□□□□□ -0.01
HERPUD1-204ENST00000439977 KLHDC7AQ5VTJ3 777 aa14.96□□□□□ -0.01
HERPUD1-204ENST00000439977 CCDC70Q6NSX1 233 aa14.96□□□□□ -0.01
HERPUD1-204ENST00000439977 FNBP4Q8N3X1 1017 aaPredicted RBP14.96□□□□□ -0.01
HERPUD1-204ENST00000439977 TBC1D22AQ8WUA7 517 aa14.96□□□□□ -0.01
HERPUD1-204ENST00000439977 EHD4Q9H223 541 aa14.96□□□□□ -0.01
HERPUD1-204ENST00000439977 UTRNP46939 3433 aa14.96□□□□□ -0.01
HERPUD1-204ENST00000439977 MED24O75448 989 aa14.96□□□□□ -0.02
HERPUD1-204ENST00000439977 PALMO75781 387 aa14.96□□□□□ -0.02
HERPUD1-204ENST00000439977 KLRC1P26715 233 aa14.96□□□□□ -0.02
HERPUD1-204ENST00000439977 DDR1Q08345 913 aa14.96□□□□□ -0.02
HERPUD1-204ENST00000439977 ADAM9Q13443 819 aa14.96□□□□□ -0.02
HERPUD1-204ENST00000439977 COBLL1Q53SF7 1204 aa14.96□□□□□ -0.02
HERPUD1-204ENST00000439977 SFMBT2Q5VUG0 894 aa14.96□□□□□ -0.02
HERPUD1-204ENST00000439977 PPP4R3AQ6IN85 833 aa14.96□□□□□ -0.02
HERPUD1-204ENST00000439977 PROCA1Q8NCQ7 364 aaPredicted RBP14.96□□□□□ -0.02
HERPUD1-204ENST00000439977 SCFD1Q8WVM8 642 aa14.96□□□□□ -0.02
HERPUD1-204ENST00000439977 HYOU1Q9Y4L1 999 aa14.96□□□□□ -0.02
HERPUD1-204ENST00000439977 A0A087X0T9 212 aa14.95□□□□□ -0.02
HERPUD1-204ENST00000439977 MYO1CO00159 1063 aa14.95□□□□□ -0.02
HERPUD1-204ENST00000439977 BBOX1O75936 387 aa14.95□□□□□ -0.02
HERPUD1-204ENST00000439977 FAM228BP0C875 321 aa14.95□□□□□ -0.02
HERPUD1-204ENST00000439977 EPS15P42566 896 aa14.95□□□□□ -0.02
HERPUD1-204ENST00000439977 PABPC4Q13310 644 aaKnown RBP eCLIP14.95□□□□□ -0.022e-12■■■■■ 31.3
HERPUD1-204ENST00000439977 QRICH1Q2TAL8 776 aa14.95□□□□□ -0.02
HERPUD1-204ENST00000439977 ASTE1Q2TB18 679 aaPredicted RBP14.95□□□□□ -0.02
HERPUD1-204ENST00000439977 SLC9C1Q4G0N8 1177 aa14.95□□□□□ -0.02
HERPUD1-204ENST00000439977 ZCWPW2Q504Y3 356 aa14.95□□□□□ -0.02
HERPUD1-204ENST00000439977 PRR16Q569H4 304 aa14.95□□□□□ -0.02
HERPUD1-204ENST00000439977 CDC42EP5Q6NZY7 148 aa14.95□□□□□ -0.02
HERPUD1-204ENST00000439977 IFT81Q8WYA0 676 aa14.95□□□□□ -0.02
HERPUD1-204ENST00000439977 NOX5Q96PH1 765 aa14.95□□□□□ -0.02
HERPUD1-204ENST00000439977 ZC3H12CQ9C0D7 883 aaKnown RBP14.95□□□□□ -0.02
HERPUD1-204ENST00000439977 EMILIN3Q9NT22 766 aa14.95□□□□□ -0.02
HERPUD1-204ENST00000439977 CWC15Q9P013 229 aaKnown RBP14.95□□□□□ -0.02
HERPUD1-204ENST00000439977 PAFAH1B1P43034 410 aa14.95□□□□□ -0.02
HERPUD1-204ENST00000439977 CLK2P49760 499 aaKnown RBP14.95□□□□□ -0.02
HERPUD1-204ENST00000439977 CYP4A11Q02928 519 aa14.95□□□□□ -0.02
HERPUD1-204ENST00000439977 IQCEQ6IPM2 695 aa14.95□□□□□ -0.02
HERPUD1-204ENST00000439977 CERS3Q8IU89 383 aa14.95□□□□□ -0.02
HERPUD1-204ENST00000439977 MSL3Q8N5Y2 521 aaKnown RBP14.95□□□□□ -0.02
HERPUD1-204ENST00000439977 P2RX7Q99572 595 aaKnown RBP14.95□□□□□ -0.02
HERPUD1-204ENST00000439977 VIPAS39Q9H9C1 493 aa14.95□□□□□ -0.02
HERPUD1-204ENST00000439977 FEZ2Q9UHY8 353 aaPredicted RBP14.95□□□□□ -0.02
HERPUD1-204ENST00000439977 IGKV6D-41A0A0C4DH26 115 aa14.94□□□□□ -0.02
HERPUD1-204ENST00000439977 G3V3G9 751 aa14.94□□□□□ -0.02
HERPUD1-204ENST00000439977 AARSP49588 968 aaKnown RBP eCLIP14.94□□□□□ -0.02
HERPUD1-204ENST00000439977 TRADDQ15628 312 aa14.94□□□□□ -0.02
HERPUD1-204ENST00000439977 KIAA0753Q2KHM9 967 aa14.94□□□□□ -0.02
HERPUD1-204ENST00000439977 DCAF8Q5TAQ9 597 aa14.94□□□□□ -0.02
HERPUD1-204ENST00000439977 TSEN2Q8NCE0 465 aaKnown RBP14.94□□□□□ -0.02
HERPUD1-204ENST00000439977 IKZF4Q9H2S9 585 aa14.94□□□□□ -0.02
HERPUD1-204ENST00000439977 FAM184BQ9ULE4 1060 aa14.94□□□□□ -0.02
HERPUD1-204ENST00000439977 RRP15Q9Y3B9 282 aaKnown RBP14.94□□□□□ -0.02
HERPUD1-204ENST00000439977 NAV1Q8NEY1 1877 aa14.94□□□□□ -0.02
HERPUD1-204ENST00000439977 MYH10P35580 1976 aa14.94□□□□□ -0.02
HERPUD1-204ENST00000439977 MAST2Q6P0Q8 1798 aa14.94□□□□□ -0.02
HERPUD1-204ENST00000439977 CYP11B2P19099 503 aa14.94□□□□□ -0.02
HERPUD1-204ENST00000439977 RBM5P52756 815 aaKnown RBP eCLIP14.94□□□□□ -0.02
HERPUD1-204ENST00000439977 IKQ13123 557 aaPredicted RBP14.94□□□□□ -0.02
HERPUD1-204ENST00000439977 HAUS3Q68CZ6 603 aa14.94□□□□□ -0.02
HERPUD1-204ENST00000439977 AENQ8WTP8 325 aaKnown RBP14.94□□□□□ -0.02
HERPUD1-204ENST00000439977 TMEM51Q9NW97 253 aa14.94□□□□□ -0.02
HERPUD1-204ENST00000439977 SFI1A8K8P3 1242 aa14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 GLI1P08151 1106 aa14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 TCP1P17987 556 aaKnown RBP14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 SLC9A1P19634 815 aa14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 PSMD2Q13200 908 aa14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 ARSHQ5FYA8 562 aa14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 C8orf74Q6P047 294 aa14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 KIAA0825Q8IV33 1275 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms