RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 ANGEL2Q5VTE6 544 aaKnown RBP4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 C9orf131Q5VYM1 1079 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 RESP18Q5W5W9 173 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 ARL6IP4Q66PJ3 421 aaKnown RBP4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 KANK3Q6NY19 840 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 PIK3AP1Q6ZUJ8 805 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 USP50Q70EL3 339 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 KCTD1Q719H9 257 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 MIGA2Q7L4E1 593 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 LYSMD3Q7Z3D4 306 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 PRICKLE2Q7Z3G6 844 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 FAM160B2Q86V87 743 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 FBXO11Q86XK2 927 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 HOMER1Q86YM7 354 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 CLEC10AQ8IUN9 316 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 ELOA2Q8IYF1 753 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 ENGASEQ8NFI3 743 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 RNF217Q8TC41 542 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 LPAR1Q92633 364 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 CUL5Q93034 780 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 FEZ1Q99689 392 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 SDF4Q9BRK5 362 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 WDR18Q9BV38 432 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 AMNQ9BXJ7 453 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 KIAA1683Q9H0B3 1180 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 TSPAN10Q9H1Z9 355 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 VCPKMTQ9H867 229 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 PSTPIP2Q9H939 334 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 AS3MTQ9HBK9 375 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 PICK1Q9NRD5 415 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 DACT1Q9NYF0 836 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 USP25Q9UHP3 1055 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 ZNF112Q9UJU3 913 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 FEM1BQ9UK73 627 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 PCDHA6Q9UN73 950 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 PCDHA8Q9Y5H6 950 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 PCDHA1Q9Y5I3 950 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 SRPRBQ9Y5M8 271 aaKnown RBP4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 DOCK1Q14185 1865 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 SCN4AP35499 1836 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 A0A1B0GVL5 298 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 A0A1W2PRG0 241 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 IQCA1LA6NCM1 817 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 C19orf81C9J6K1 198 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 CDK2AP1O14519 115 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 WDR46O15213 610 aaKnown RBP4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 PPP1R12BO60237 982 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 DDNO94850 711 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 ZNF202O95125 648 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 EGFRP00533 1210 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 VEGFAP15692 232 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 PFKFB1P16118 471 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 YBX3P16989 372 aaKnown RBP eCLIP4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 RHOQP17081 205 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 ATP2B1P20020 1258 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 NF2P35240 595 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 SLC16A2P36021 539 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 LONP1P36776 959 aaKnown RBP4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 PRPHP41219 470 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 EPS15P42566 896 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 SYKP43405 635 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 PHKA2P46019 1235 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 JAG1P78504 1218 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 ATP2C1P98194 919 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 POU4F2Q12837 409 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 AP3B2Q13367 1082 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 SNW1Q13573 536 aaKnown RBP4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 MTFR1Q15390 333 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 ZNF174Q15697 407 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 CDC37Q16543 378 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 QRICH1Q2TAL8 776 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 UVSSAQ2YD98 709 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 NBPF12Q5TAG4 269 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 TTBK2Q6IQ55 1244 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 TMEM214Q6NUQ4 689 aaKnown RBP4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 SASS6Q6UVJ0 657 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 RBM43Q6ZSC3 357 aaKnown RBP4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 ILDR2Q71H61 639 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 NEK8Q86SG6 692 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 SCYL3Q8IZE3 742 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 FMR1NBQ8N0W7 255 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 PRPF38AQ8NAV1 312 aaKnown RBP4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 TRPM4Q8TD43 1214 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 ACER1Q8TDN7 264 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 SHISA4Q96DD7 197 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 MKNK1Q9BUB5 465 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 FTOQ9C0B1 505 aaKnown RBP eCLIP4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 MAF1Q9H063 256 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 NAT10Q9H0A0 1025 aaKnown RBP4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 CPVLQ9H3G5 476 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 GRPEL1Q9HAV7 217 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 GGA3Q9NZ52 723 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 DNMT3LQ9UJW3 386 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 FBXO2Q9UK22 296 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 KCNH3Q9ULD8 1083 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 PRR12Q9ULL5 1215 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 PCDHB6Q9Y5E3 794 aa4.5□□□□□ -1.69
HMGB1P37-201ENST00000439613 MYH7BA7E2Y1 1941 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 GLTPD2A6NH11 291 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 UNCXA6NJT0 531 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms