RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 WASF3Q9UPY6 502 aa5.11□□□□□ -1.59
HMGB3P12-201ENST00000438745 PCDHB4Q9Y5E5 795 aa5.11□□□□□ -1.59
HMGB3P12-201ENST00000438745 TRBV23-1A0A0A0MS06 115 aa5.1□□□□□ -1.59
HMGB3P12-201ENST00000438745 KRIT1O00522 736 aa5.1□□□□□ -1.59
HMGB3P12-201ENST00000438745 MAFKO60675 156 aa5.1□□□□□ -1.59
HMGB3P12-201ENST00000438745 FAM153BP0C7A2 387 aa5.1□□□□□ -1.59
HMGB3P12-201ENST00000438745 GRK2P25098 689 aa5.1□□□□□ -1.59
HMGB3P12-201ENST00000438745 GRK3P35626 688 aa5.1□□□□□ -1.59
HMGB3P12-201ENST00000438745 NKX3-2P78367 333 aa5.1□□□□□ -1.59
HMGB3P12-201ENST00000438745 SSRP1Q08945 709 aaKnown RBP5.1□□□□□ -1.59
HMGB3P12-201ENST00000438745 ADAM9Q13443 819 aa5.1□□□□□ -1.59
HMGB3P12-201ENST00000438745 SMAD4Q13485 552 aaKnown RBP5.1□□□□□ -1.59
HMGB3P12-201ENST00000438745 ZC3H12BQ5HYM0 836 aaKnown RBP5.1□□□□□ -1.59
HMGB3P12-201ENST00000438745 FAM209AQ5JX71 171 aa5.1□□□□□ -1.59
HMGB3P12-201ENST00000438745 TEPPQ6URK8 271 aa5.1□□□□□ -1.59
HMGB3P12-201ENST00000438745 TRIM48Q8IWZ4 208 aa5.1□□□□□ -1.59
HMGB3P12-201ENST00000438745 TTLL6Q8N841 843 aa5.1□□□□□ -1.59
HMGB3P12-201ENST00000438745 PTPRN2Q92932 1015 aa5.1□□□□□ -1.59
HMGB3P12-201ENST00000438745 EXOC2Q96KP1 924 aa5.1□□□□□ -1.59
HMGB3P12-201ENST00000438745 TEPSINQ96N21 525 aa5.1□□□□□ -1.59
HMGB3P12-201ENST00000438745 SPATA25Q9BR10 227 aa5.1□□□□□ -1.59
HMGB3P12-201ENST00000438745 DHRS4Q9BTZ2 278 aa5.1□□□□□ -1.59
HMGB3P12-201ENST00000438745 NTMQ9P121 344 aa5.1□□□□□ -1.59
HMGB3P12-201ENST00000438745 MYOTQ9UBF9 498 aa5.1□□□□□ -1.59
HMGB3P12-201ENST00000438745 SMARCA5O60264 1052 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P12-201ENST00000438745 FOXD2O60548 495 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P12-201ENST00000438745 SOD2P04179 222 aa5.09□□□□□ -1.59
HMGB3P12-201ENST00000438745 STAT5AP42229 794 aa5.09□□□□□ -1.59
HMGB3P12-201ENST00000438745 EPHA5P54756 1037 aa5.09□□□□□ -1.59
HMGB3P12-201ENST00000438745 MAMDC2Q7Z304 686 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P12-201ENST00000438745 ZNF761Q86XN6 746 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P12-201ENST00000438745 PROSER1Q86XN7 944 aa5.09□□□□□ -1.59
HMGB3P12-201ENST00000438745 ZDHHC14Q8IZN3 488 aa5.09□□□□□ -1.59
HMGB3P12-201ENST00000438745 UHMK1Q8TAS1 419 aaKnown RBP5.09□□□□□ -1.59
HMGB3P12-201ENST00000438745 PIP4K2CQ8TBX8 421 aa5.09□□□□□ -1.59
HMGB3P12-201ENST00000438745 DEPDC7Q96QD5 511 aa5.09□□□□□ -1.59
HMGB3P12-201ENST00000438745 PFDN2Q9UHV9 154 aa5.09□□□□□ -1.59
HMGB3P12-201ENST00000438745 KDM2BQ8NHM5 1336 aa5.08□□□□□ -1.6
HMGB3P12-201ENST00000438745 FAM47E-STBD1D6RA91 191 aa5.08□□□□□ -1.6
HMGB3P12-201ENST00000438745 SLC27A2O14975 620 aa5.08□□□□□ -1.6
HMGB3P12-201ENST00000438745 NKRFO15226 690 aaKnown RBP eCLIP5.08□□□□□ -1.6
HMGB3P12-201ENST00000438745 SUMO1P63165 101 aaKnown RBP5.08□□□□□ -1.6
HMGB3P12-201ENST00000438745 SPIRE1Q08AE8 756 aa5.08□□□□□ -1.6
HMGB3P12-201ENST00000438745 NFIXQ14938 502 aa5.08□□□□□ -1.6
HMGB3P12-201ENST00000438745 SF3A1Q15459 793 aaKnown RBP5.08□□□□□ -1.6
HMGB3P12-201ENST00000438745 STK32CQ86UX6 486 aa5.08□□□□□ -1.6
HMGB3P12-201ENST00000438745 ADAMTS17Q8TE56 1095 aa5.08□□□□□ -1.6
HMGB3P12-201ENST00000438745 SNTG2Q9NY99 539 aa5.08□□□□□ -1.6
HMGB3P12-201ENST00000438745 TRAF6Q9Y4K3 522 aa5.08□□□□□ -1.6
HMGB3P12-201ENST00000438745 TCRBV5S4A2TA0A5A2 114 aa5.07□□□□□ -1.6
HMGB3P12-201ENST00000438745 CCDC85CA6NKD9 419 aa5.07□□□□□ -1.6
HMGB3P12-201ENST00000438745 AQP7O14520 342 aa5.07□□□□□ -1.6
HMGB3P12-201ENST00000438745 COL6A2P12110 1019 aa5.07□□□□□ -1.6
HMGB3P12-201ENST00000438745 GABREP78334 506 aa5.07□□□□□ -1.6
HMGB3P12-201ENST00000438745 RTP5Q14D33 572 aa5.07□□□□□ -1.6
HMGB3P12-201ENST00000438745 FAM26FQ5R3K3 315 aa5.07□□□□□ -1.6
HMGB3P12-201ENST00000438745 NT5DC1Q5TFE4 455 aa5.07□□□□□ -1.6
HMGB3P12-201ENST00000438745 SH3RF2Q8TEC5 729 aa5.07□□□□□ -1.6
HMGB3P12-201ENST00000438745 SREK1Q8WXA9 508 aaKnown RBP5.07□□□□□ -1.6
HMGB3P12-201ENST00000438745 DNAJC7Q99615 494 aa5.07□□□□□ -1.6
HMGB3P12-201ENST00000438745 CDC6Q99741 560 aa5.07□□□□□ -1.6
HMGB3P12-201ENST00000438745 LNPKQ9C0E8 428 aa5.07□□□□□ -1.6
HMGB3P12-201ENST00000438745 IPPKQ9H8X2 491 aa5.07□□□□□ -1.6
HMGB3P12-201ENST00000438745 TELO2Q9Y4R8 837 aa5.07□□□□□ -1.6
HMGB3P12-201ENST00000438745 CCDC163A0A0D9SF12 145 aa5.06□□□□□ -1.6
HMGB3P12-201ENST00000438745 ARVCFO00192 962 aa5.06□□□□□ -1.6
HMGB3P12-201ENST00000438745 KCNQ2O43526 872 aa5.06□□□□□ -1.6
HMGB3P12-201ENST00000438745 PRICKLE3O43900 615 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P12-201ENST00000438745 FAHP16930 419 aa5.06□□□□□ -1.6
HMGB3P12-201ENST00000438745 ZNF28P17035 718 aa5.06□□□□□ -1.6
HMGB3P12-201ENST00000438745 TUSC3Q13454 348 aa5.06□□□□□ -1.6
HMGB3P12-201ENST00000438745 PCDH19Q8TAB3 1148 aa5.06□□□□□ -1.6
HMGB3P12-201ENST00000438745 KCNJ15Q99712 375 aa5.06□□□□□ -1.6
HMGB3P12-201ENST00000438745 YIPF4Q9BSR8 244 aa5.06□□□□□ -1.6
HMGB3P12-201ENST00000438745 ADAM7Q9H2U9 754 aa5.06□□□□□ -1.6
HMGB3P12-201ENST00000438745 DSEQ9UL01 958 aa5.06□□□□□ -1.6
HMGB3P12-201ENST00000438745 MRPS23Q9Y3D9 190 aaKnown RBP5.06□□□□□ -1.6
HMGB3P12-201ENST00000438745 NUB1Q9Y5A7 615 aa5.06□□□□□ -1.6
HMGB3P12-201ENST00000438745 DUSP10Q9Y6W6 482 aa5.06□□□□□ -1.6
HMGB3P12-201ENST00000438745 DDX3XO00571 662 aaKnown RBP eCLIP5.05□□□□□ -1.6
HMGB3P12-201ENST00000438745 IGSF3O75054 1194 aa5.05□□□□□ -1.6
HMGB3P12-201ENST00000438745 GNAT1P11488 350 aa5.05□□□□□ -1.6
HMGB3P12-201ENST00000438745 SYN1P17600 705 aa5.05□□□□□ -1.6
HMGB3P12-201ENST00000438745 NAT1P18440 290 aa5.05□□□□□ -1.6
HMGB3P12-201ENST00000438745 IL13P35225 146 aa5.05□□□□□ -1.6
HMGB3P12-201ENST00000438745 MLLT6P55198 1093 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P12-201ENST00000438745 PAK1Q13153 545 aa5.05□□□□□ -1.6
HMGB3P12-201ENST00000438745 PAN2Q504Q3 1202 aaKnown RBP5.05□□□□□ -1.6
HMGB3P12-201ENST00000438745 TRIM61Q5EBN2 209 aa5.05□□□□□ -1.6
HMGB3P12-201ENST00000438745 CYB5RLQ6IPT4 315 aa5.05□□□□□ -1.6
HMGB3P12-201ENST00000438745 C16orf59Q7L2K0 433 aa5.05□□□□□ -1.6
HMGB3P12-201ENST00000438745 RBM12BQ8IXT5 1001 aaKnown RBP5.05□□□□□ -1.6
HMGB3P12-201ENST00000438745 TXNDC5Q8NBS9 432 aaKnown RBP5.05□□□□□ -1.6
HMGB3P12-201ENST00000438745 GSTCDQ8NEC7 633 aa5.05□□□□□ -1.6
HMGB3P12-201ENST00000438745 DRC1Q96MC2 740 aa5.05□□□□□ -1.6
HMGB3P12-201ENST00000438745 IPO9Q96P70 1041 aaKnown RBP5.05□□□□□ -1.6
HMGB3P12-201ENST00000438745 SRPK1Q96SB4 655 aaKnown RBP5.05□□□□□ -1.6
HMGB3P12-201ENST00000438745 TMEM209Q96SK2 561 aa5.05□□□□□ -1.6
HMGB3P12-201ENST00000438745 ALG1Q9BT22 464 aa5.05□□□□□ -1.6
HMGB3P12-201ENST00000438745 PCDHA8Q9Y5H6 950 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms