RNA–Protein interactions for RNA: ENST00000436554.5

LINC00271-202, long intergenic non-protein coding RNA 271, humanhuman

TSL 5 BASIC

Gene LINC00271, Length 655 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-202ENST00000436554 OPLAHO14841 1288 aa13.46□□□□□ -0.25
LINC00271-202ENST00000436554 NCK2O43639 380 aa13.46□□□□□ -0.25
LINC00271-202ENST00000436554 KDM4AO75164 1064 aa13.46□□□□□ -0.25
LINC00271-202ENST00000436554 CTSHP09668 335 aa13.46□□□□□ -0.25
LINC00271-202ENST00000436554 PARP1P09874 1014 aaKnown RBP13.46□□□□□ -0.25
LINC00271-202ENST00000436554 SMIM10L2AP0DMW4 78 aa13.46□□□□□ -0.25
LINC00271-202ENST00000436554 SMIM10L2BP0DMW5 78 aa13.46□□□□□ -0.25
LINC00271-202ENST00000436554 TGFB3P10600 412 aa13.46□□□□□ -0.25
LINC00271-202ENST00000436554 DLX2Q07687 328 aaPredicted RBP13.46□□□□□ -0.25
LINC00271-202ENST00000436554 CTC1Q2NKJ3 1217 aa13.46□□□□□ -0.25
LINC00271-202ENST00000436554 ASPRV1Q53RT3 343 aa13.46□□□□□ -0.25
LINC00271-202ENST00000436554 CCDC178Q5BJE1 867 aa13.46□□□□□ -0.25
LINC00271-202ENST00000436554 STOX1Q6ZVD7 989 aa13.46□□□□□ -0.25
LINC00271-202ENST00000436554 RPAINQ86UA6 219 aa13.46□□□□□ -0.25
LINC00271-202ENST00000436554 IQCA1Q86XH1 822 aa13.46□□□□□ -0.25
LINC00271-202ENST00000436554 GPKOWQ92917 476 aaPredicted RBP eCLIP13.46□□□□□ -0.25
LINC00271-202ENST00000436554 IL17RAQ96F46 866 aa13.46□□□□□ -0.25
LINC00271-202ENST00000436554 MFSD14AQ96MC6 490 aa13.46□□□□□ -0.25
LINC00271-202ENST00000436554 MUTYHQ9UIF7 546 aa13.46□□□□□ -0.25
LINC00271-202ENST00000436554 SIP14410 1827 aa13.46□□□□□ -0.26
LINC00271-202ENST00000436554 MYO7AQ13402 2215 aa13.45□□□□□ -0.26
LINC00271-202ENST00000436554 ZMYM6O95789 1325 aa13.45□□□□□ -0.26
LINC00271-202ENST00000436554 CCDC171Q6TFL3 1326 aa13.45□□□□□ -0.26
LINC00271-202ENST00000436554 GRM6O15303 877 aa13.45□□□□□ -0.26
LINC00271-202ENST00000436554 UBA1P22314 1058 aaKnown RBP13.45□□□□□ -0.26
LINC00271-202ENST00000436554 HOXA13P31271 388 aaPredicted RBP13.45□□□□□ -0.26
LINC00271-202ENST00000436554 HOXC8P31273 242 aa13.45□□□□□ -0.26
LINC00271-202ENST00000436554 HYAL1Q12794 435 aa13.45□□□□□ -0.26
LINC00271-202ENST00000436554 PGM5Q15124 567 aa13.45□□□□□ -0.26
LINC00271-202ENST00000436554 SMAD2Q15796 467 aaKnown RBP13.45□□□□□ -0.26
LINC00271-202ENST00000436554 FIBCD1Q8N539 461 aa13.45□□□□□ -0.26
LINC00271-202ENST00000436554 IL31RAQ8NI17 732 aa13.45□□□□□ -0.26
LINC00271-202ENST00000436554 ZSCAN10Q96SZ4 725 aaPredicted RBP13.45□□□□□ -0.26
LINC00271-202ENST00000436554 AMNQ9BXJ7 453 aa13.45□□□□□ -0.26
LINC00271-202ENST00000436554 SETD4Q9NVD3 440 aa13.45□□□□□ -0.26
LINC00271-202ENST00000436554 ZSWIM5Q9P217 1185 aa13.45□□□□□ -0.26
LINC00271-202ENST00000436554 C5orf42Q9H799 3197 aa13.44□□□□□ -0.26
LINC00271-202ENST00000436554 B4E1Z4 1266 aa13.44□□□□□ -0.26
LINC00271-202ENST00000436554 MBTPS2O43462 519 aa13.44□□□□□ -0.26
LINC00271-202ENST00000436554 PPP1R11O60927 126 aaPredicted RBP13.44□□□□□ -0.26
LINC00271-202ENST00000436554 LGALS2P05162 132 aa13.44□□□□□ -0.26
LINC00271-202ENST00000436554 RB1P06400 928 aa13.44□□□□□ -0.26
LINC00271-202ENST00000436554 CTNNB1P35222 781 aa13.44□□□□□ -0.26
LINC00271-202ENST00000436554 GTF2F1P35269 517 aaKnown RBP eCLIP13.44□□□□□ -0.26
LINC00271-202ENST00000436554 BMPR1AP36894 532 aa13.44□□□□□ -0.26
LINC00271-202ENST00000436554 GHRHRQ02643 423 aa13.44□□□□□ -0.26
LINC00271-202ENST00000436554 TICAM2Q86XR7 235 aa13.44□□□□□ -0.26
LINC00271-202ENST00000436554 RNF135Q8IUD6 432 aa13.44□□□□□ -0.26
LINC00271-202ENST00000436554 STAG2Q8N3U4 1231 aa13.44□□□□□ -0.26
LINC00271-202ENST00000436554 ENAHQ8N8S7 591 aaPredicted RBP13.44□□□□□ -0.26
LINC00271-202ENST00000436554 PHOX2BQ99453 314 aa13.44□□□□□ -0.26
LINC00271-202ENST00000436554 IGFLR1Q9H665 355 aa13.44□□□□□ -0.26
LINC00271-202ENST00000436554 MAP3K20Q9NYL2 800 aaKnown RBP13.44□□□□□ -0.26
LINC00271-202ENST00000436554 PCDHA1Q9Y5I3 950 aa13.44□□□□□ -0.26
LINC00271-202ENST00000436554 TRIOO75962 3097 aa13.43□□□□□ -0.26
LINC00271-202ENST00000436554 TRIM6-TRIM34B2RNG4 842 aa13.43□□□□□ -0.26
LINC00271-202ENST00000436554 C5orf67F2Z3F1 127 aa13.43□□□□□ -0.26
LINC00271-202ENST00000436554 CAND2O75155 1236 aa13.43□□□□□ -0.26
LINC00271-202ENST00000436554 GNAT1P11488 350 aa13.43□□□□□ -0.26
LINC00271-202ENST00000436554 HERC4Q5GLZ8 1057 aaPredicted RBP13.43□□□□□ -0.26
LINC00271-202ENST00000436554 FAM26DQ5JW98 314 aa13.43□□□□□ -0.26
LINC00271-202ENST00000436554 FCHSD1Q86WN1 690 aa13.43□□□□□ -0.26
LINC00271-202ENST00000436554 APBB2Q92870 758 aa13.43□□□□□ -0.26
LINC00271-202ENST00000436554 RILPL2Q969X0 211 aa13.43□□□□□ -0.26
LINC00271-202ENST00000436554 MICAL3Q7RTP6 2002 aa13.42□□□□□ -0.26
LINC00271-202ENST00000436554 KLRF2D3W0D1 207 aa13.42□□□□□ -0.26
LINC00271-202ENST00000436554 STXBP3O00186 592 aa13.42□□□□□ -0.26
LINC00271-202ENST00000436554 NOP56O00567 594 aaKnown RBP13.42□□□□□ -0.26
LINC00271-202ENST00000436554 CSPG5O95196 566 aa13.42□□□□□ -0.26
LINC00271-202ENST00000436554 CHRNA1P02708 482 aa13.42□□□□□ -0.26
LINC00271-202ENST00000436554 LINC00271P0C7V0 271 aa13.42□□□□□ -0.26
LINC00271-202ENST00000436554 CCND2P30279 289 aa13.42□□□□□ -0.26
LINC00271-202ENST00000436554 RRP1P56182 461 aaKnown RBP13.42□□□□□ -0.26
LINC00271-202ENST00000436554 IER5LQ5T953 404 aa13.42□□□□□ -0.26
LINC00271-202ENST00000436554 EDAQ92838 391 aa13.42□□□□□ -0.26
LINC00271-202ENST00000436554 MTMR8Q96EF0 704 aa13.42□□□□□ -0.26
LINC00271-202ENST00000436554 POP1Q99575 1024 aaKnown RBP13.42□□□□□ -0.26
LINC00271-202ENST00000436554 C11orf84Q9BUA3 381 aaPredicted RBP13.42□□□□□ -0.26
LINC00271-202ENST00000436554 USP26Q9BXU7 913 aa13.42□□□□□ -0.26
LINC00271-202ENST00000436554 LMAN2LQ9H0V9 348 aa13.42□□□□□ -0.26
LINC00271-202ENST00000436554 TELO2Q9Y4R8 837 aa13.42□□□□□ -0.26
LINC00271-202ENST00000436554 MYH7BA7E2Y1 1941 aa13.42□□□□□ -0.26
LINC00271-202ENST00000436554 KIAA1217Q5T5P2 1943 aa13.42□□□□□ -0.26
LINC00271-202ENST00000436554 GCOM1H8Y6P7 765 aaPredicted RBP13.41□□□□□ -0.26
LINC00271-202ENST00000436554 ENPP3O14638 875 aa13.41□□□□□ -0.26
LINC00271-202ENST00000436554 ZBTB5O15062 677 aa13.41□□□□□ -0.26
LINC00271-202ENST00000436554 LINC01565O15544 149 aa13.41□□□□□ -0.26
LINC00271-202ENST00000436554 POLR2MP0CAP2 368 aa13.41□□□□□ -0.26
LINC00271-202ENST00000436554 SDSP20132 328 aa13.41□□□□□ -0.26
LINC00271-202ENST00000436554 NT5C2P49902 561 aa13.41□□□□□ -0.26
LINC00271-202ENST00000436554 MFAP1P55081 439 aaKnown RBP13.41□□□□□ -0.26
LINC00271-202ENST00000436554 ADAM17P78536 824 aa13.41□□□□□ -0.26
LINC00271-202ENST00000436554 ARHGAP4P98171 946 aa13.41□□□□□ -0.26
LINC00271-202ENST00000436554 ADAM15Q13444 863 aa13.41□□□□□ -0.26
LINC00271-202ENST00000436554 SMAD4Q13485 552 aaKnown RBP13.41□□□□□ -0.26
LINC00271-202ENST00000436554 UTP14CQ5TAP6 766 aaKnown RBP13.41□□□□□ -0.26
LINC00271-202ENST00000436554 CYFIP1Q7L576 1253 aa13.41□□□□□ -0.26
LINC00271-202ENST00000436554 SAMD3Q8N6K7 520 aa13.41□□□□□ -0.26
LINC00271-202ENST00000436554 GPR20Q99678 358 aa13.41□□□□□ -0.26
LINC00271-202ENST00000436554 ALG13Q9NP73 1137 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms